prot_A-nodosum_M_contig1047.22.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1047.22.2
Unique Nameprot_A-nodosum_M_contig1047.22.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length78
Homology
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BLAST of mRNA_A-nodosum_M_contig1047.22.2 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.370e-11
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 MELKPLTTPNTFPELGLLPPPEPFGTLNRLLKRSIEAMRGTPDFVHFLEPVS 52
            +EL+P   P +F ELGLLPP EPFG LNRLLK++++AMR   D  HFL PVS
Sbjct:  207 IELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVS 258
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BLAST of mRNA_A-nodosum_M_contig1047.22.2 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.400e-11
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 MELKPLTTPNTFPELGLLPPPEPFGTLNRLLKRSIEAMRGTPDFVHFLEPVS 52
            +EL+P   P +F ELGLLPP EPFG LNRLLK++++AMR   D  HFL PVS
Sbjct: 1678 IELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVS 1729
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.22.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3E5_9PHAE1.370e-1161.54Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G6R7_ECTSI1.400e-1161.54Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1047contigA-nodosum_M_contig1047:144667..145256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1047.22.2mRNA_A-nodosum_M_contig1047.22.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1047 143534..145427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1047.22.2 ID=prot_A-nodosum_M_contig1047.22.2|Name=mRNA_A-nodosum_M_contig1047.22.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=78bp
MELKPLTTPNTFPELGLLPPPEPFGTLNRLLKRSIEAMRGTPDFVHFLEP
VSPGDISRGDYHPTTCGSPLPPPVRRQ*
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