prot_A-nodosum_M_contig1047.22.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1047.22.1
Unique Nameprot_A-nodosum_M_contig1047.22.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length54
Homology
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BLAST of mRNA_A-nodosum_M_contig1047.22.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.930e-18
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:    1 MLQLEALVSKQDTAVDARWRKKGRRRKWRTFVHNAQTAAQLLAAWGAFREMID 53
            ML +EALV KQDT VDARW + GRRRKWRTFV+NAQTA QLLAAWGAF+++ID
Sbjct:   59 MLHIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVID 111
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BLAST of mRNA_A-nodosum_M_contig1047.22.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 4.020e-18
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:    1 MLQLEALVSKQDTAVDARWRKKGRRRKWRTFVHNAQTAAQLLAAWGAFREMID 53
            ML +EALV KQDT VDARW + GRRRKWRTFV+NAQTA QLLAAWGAF+++ID
Sbjct: 1530 MLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVID 1582
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3E5_9PHAE2.930e-1877.36Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G6R7_ECTSI4.020e-1877.36Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1047contigA-nodosum_M_contig1047:143540..144140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1047.22.1mRNA_A-nodosum_M_contig1047.22.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1047 143534..147134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1047.22.1 ID=prot_A-nodosum_M_contig1047.22.1|Name=mRNA_A-nodosum_M_contig1047.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=54bp
MLQLEALVSKQDTAVDARWRKKGRRRKWRTFVHNAQTAAQLLAAWGAFRE
MID*
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