prot_A-nodosum_M_contig1046.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1046.4.1
Unique Nameprot_A-nodosum_M_contig1046.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length99
Homology
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BLAST of mRNA_A-nodosum_M_contig1046.4.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 6.400e-14
Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0 
Query:    1 MVADLRLMIDNCRRYYTGNPNHEEKTIQLALSNAKIVEDALQAGLELLLPEWQAAA-APP 59
            MVADLRLM++NC+RYYT +   +  T Q AL+NA  V+DAL+AG++ LLPEWQAA  APP
Sbjct:  930 MVADLRLMVENCKRYYTSSVLLDADTTQAALANAAAVQDALEAGVKALLPEWQAATPAPP 989
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BLAST of mRNA_A-nodosum_M_contig1046.4.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 1.760e-6
Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 MVADLRLMIDNCRRYYTGNPNHEEKTIQLALSNAKIVEDALQA 43
            MVADLRLM++NC+RYYT +   +  T Q AL+NA  V+DAL+A
Sbjct:  549 MVADLRLMVENCKRYYTSSVLLDADTTQAALANAAAVQDALEA 591
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1046.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNI2_9PHAE6.400e-1461.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI3_ECTSI1.760e-658.14Global transcription factor group n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1046contigA-nodosum_M_contig1046:10357..11409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1046.4.1mRNA_A-nodosum_M_contig1046.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1046 10357..11412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1046.4.1 ID=prot_A-nodosum_M_contig1046.4.1|Name=mRNA_A-nodosum_M_contig1046.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=99bp
MVADLRLMIDNCRRYYTGNPNHEEKTIQLALSNAKIVEDALQAGLELLLP
EWQAAAAPPQPGNRSRPKSVTPLLKSVSPPPKADRRASLPSGTASASQL
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