prot_A-nodosum_M_contig10455.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10455.2.1
Unique Nameprot_A-nodosum_M_contig10455.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length104
Homology
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BLAST of mRNA_A-nodosum_M_contig10455.2.1 vs. uniprot
Match: A0A6H5JA84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA84_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 4.900e-6
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0 
Query:   46 MANLKEIKPVSAEALNKNPHNLLANYADRGNMTWNQSTSNFLESTNSMLGAE 97
            M  ++ + P + + LN  PHN  ANYA + N+ W+Q+TSNF ES N ++G E
Sbjct:    1 MNEVQNLNPAAFKKLNDTPHNTWANYACKNNVIWDQTTSNFSESLNKLIGEE 52
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10455.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JA84_9PHAE4.900e-644.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10455contigA-nodosum_M_contig10455:4890..5506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10455.2.1mRNA_A-nodosum_M_contig10455.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10455 4890..5513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10455.2.1 ID=prot_A-nodosum_M_contig10455.2.1|Name=mRNA_A-nodosum_M_contig10455.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=104bp
AVCPFTGDCRCLEHILTNIPAVGDVGKTLCYEMSKAPTEGIFNKYMANLK
EIKPVSAEALNKNPHNLLANYADRGNMTWNQSTSNFLESTNSMLGAEVWI
TTA*
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