prot_A-nodosum_M_contig1040.16.1 (polypeptide) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A6H5KBR5_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR5_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 6.210e-14 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVVALE 91
+YDSV R +LWKVLAR GI+ ++++VIRQFH MRA VR DG+ + F V Q QGCV+SPL+F++ E
Sbjct: 29 AYDSVDREMLWKVLARAGISAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFNIFFAE 100
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A6H5K934_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K934_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 7.310e-13 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVVALE 91
+YDSV R +LWKVLAR GI ++++VIRQFH MRA VR DG+ + F V Q QGCV+SPL+F++ E
Sbjct: 9 AYDSVDREMLWKVLARAGIPAKLIEVIRQFHDVMRARVRMDDGELSDWFFVTQGVRQGCVLSPLLFTIFFAE 80
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A6H5JVL0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVL0_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.090e-12 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVVALE 91
+YDSV R +LWKVLAR GI+ ++++VIRQFH MRA VR DG+ + F V Q QGCV+SPL+F++ E
Sbjct: 232 AYDSVDREMLWKVLARAGISAKLIEVIRQFHDGMRARVRMDDGELSDWFFVTQGERQGCVLSPLLFNIFFAE 303
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A0N4U3M3_DRAME (Reverse transcriptase domain-containing protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4U3M3_DRAME) HSP 1 Score: 56.6 bits (135), Expect = 2.180e-7 Identity = 23/65 (35.38%), Postives = 43/65 (66.15%), Query Frame = 0
Query: 22 YDSVHRALLWKVLARFGITPQIMKVIRQFHKMRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFS 86
+DS+ RA+LW+V+ R G+ +I+++I+ F++ + G+ +SFE+ CQGC +SP +F+
Sbjct: 44 FDSIDRAVLWRVMERGGVPEKIIRLIKAFYERTSAQVCIYGELTDSFEIRTDVCQGCTLSPTIFN 108
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A3P7CZW8_SCHSO (Reverse transcriptase domain-containing protein n=2 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A3P7CZW8_SCHSO) HSP 1 Score: 57.8 bits (138), Expect = 3.070e-7 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVV 88
++D+V+R LWKV+ +FG Q M ++RQ H M ACV G E+F V QGCV++P++FS++
Sbjct: 80 AFDTVNREGLWKVIQKFGCPEQFMHMVRQLHDGMTACVTD-SGTVSEAFAVTNGMKQGCVLAPILFSLM 147
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A6H5L431_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L431_9PHAE) HSP 1 Score: 52.4 bits (124), Expect = 6.150e-6 Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDG 62
+YDSV R +LWKVLAR GI+ ++++VIRQFH MRA VR DG
Sbjct: 74 AYDSVDREMLWKVLARAGISAKLIEVIRQFHDGMRARVRMDDG 116
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A183T3T3_SCHSO (Reverse transcriptase domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183T3T3_SCHSO) HSP 1 Score: 53.5 bits (127), Expect = 1.520e-5 Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVV 88
++++VHR LWKV+ +FG + + ++RQ H M A V G +G E+F VA QGCV++P++ S++
Sbjct: 15 AFNTVHRDGLWKVMQKFGFSERFTHMVRQLHDGMTARVTG-NGMVSEAFAVANGMKQGCVMAPILLSLM 82
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A183SRN7_SCHSO (Reverse transcriptase domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183SRN7_SCHSO) HSP 1 Score: 51.6 bits (122), Expect = 5.800e-5 Identity = 36/124 (29.03%), Postives = 58/124 (46.77%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHKMRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVV-------ALEADSAGTRTYSQIFPTFKSSRQMLALKR--HWNVRGVLFGGCCKLMT 135
++D+V+R LWK + +FG + + +RQ H +G E+F V QGCV++P++FS++ A + G R + +SR+M A R V +LF C L T
Sbjct: 15 AFDTVNRDGLWKAMQKFGCSERFTHTVRQLHDGMLARVTDNGTVSEAFTVTNGGKQGCVLAPILFSLMFSAMLMDAYRDEQPGIRIAYRTDAHLLNSRRMQAPTRVSTTTVHDLLFADDCALNT 138
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Match: A0A6S7JDV2_PARCT (RNA-directed DNA polymerase from mobile element jockey-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JDV2_PARCT) HSP 1 Score: 51.6 bits (122), Expect = 9.500e-5 Identity = 25/69 (36.23%), Postives = 44/69 (63.77%), Query Frame = 0
Query: 21 SYDSVHRALLWKVLARFGITPQIMKVIRQFHK-MRACVRGYDGQYLESFEVAQWRCQGCVVSPLVFSVV 88
++D+V+R LW ++ +F P+ + ++RQFH M+A V DG FEV QGC+++P++FS++
Sbjct: 391 AFDTVNRTGLWLIMEKFDCPPRFITMVRQFHDGMQAHVLD-DGNQSSPFEVTNGVKQGCILAPMLFSMM 458 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1040.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig1040.16.1 ID=prot_A-nodosum_M_contig1040.16.1|Name=mRNA_A-nodosum_M_contig1040.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=149bpback to top |