prot_A-nodosum_M_contig104.79.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig104.79.1
Unique Nameprot_A-nodosum_M_contig104.79.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length207
Homology
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: D7G590_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G590_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 2.950e-67
Identity = 116/164 (70.73%), Postives = 128/164 (78.05%), Query Frame = 0
Query:   45 ASSFMLA-APGLAATANVQH-GAAVSGFTGYNSVEQRETVVDRSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            ASSFM+    G AAT   Q  GAAVSGFTG N V QR+   DRS L+M+RH +  KKL LPADQRKALLRGLT          TT+ RAKAVRK+VDHMITLSKNGSLHARRQAMGYIYDK+LVHALFESGAERYG+R GGY R++ T PRKGDNAKMA+IELV
Sbjct:   18 ASSFMIGPGGGAAATIRAQRQGAAVSGFTGCNPVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKHVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A836CL42_9STRA (Ribosomal protein L17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL42_9STRA)

HSP 1 Score: 178 bits (452), Expect = 7.980e-54
Identity = 95/142 (66.90%), Postives = 106/142 (74.65%), Query Frame = 0
Query:   65 AAVSGFTGYNSVEQRETVVDRSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            A VS F G  +V  R  VV    LQM+RH +RV KLG PADQRKALLR LT          TTL RA+AVRK VDHMI L K+GSLH+RRQAMG++YDK LVHALFE   ERYG+RNGGYCRVL TMPR+GDNAKMA+IELV
Sbjct:   25 ARVSSFQGA-AVASRNVVVAEGGLQMMRHMKRVAKLGKPADQRKALLRSLTTEVIRHGRIKTTLVRARAVRKFVDHMIQLGKDGSLHSRRQAMGFMYDKALVHALFEQAPERYGERNGGYCRVLKTMPRQGDNAKMAIIELV 165          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: Q5K251_GUITH (50S ribosomal protein L17 n=2 Tax=Guillardia theta TaxID=55529 RepID=Q5K251_GUITH)

HSP 1 Score: 171 bits (432), Expect = 6.440e-51
Identity = 85/121 (70.25%), Postives = 97/121 (80.17%), Query Frame = 0
Query:   86 SMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            S L+M+RHG+RV KLGLP DQRKALLR LT          TTLARAKAVR  VD MITL+K+GSL ARRQAMG++YDK+LVHALFE   ERY +RNGGYCRVL T+PRKGDN+KM +IELV
Sbjct:   36 SSLEMMRHGKRVAKLGLPQDQRKALLRSLTTEVIRHGRITTTLARAKAVRSEVDKMITLAKDGSLSARRQAMGWMYDKQLVHALFEQAPERYSERNGGYCRVLQTLPRKGDNSKMGIIELV 156          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A7S1DX23_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DX23_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.650e-51
Identity = 91/144 (63.19%), Postives = 104/144 (72.22%), Query Frame = 0
Query:   68 SGFTGYNSVEQRE---TVVDR--SMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            S FTGY     ++   T + R  S L M+RH +  KKLG PADQRKALLR LT          TTL RA+AVRK+VDHMITL K G LHARRQAM ++YDK LVHALF++  ERYGDRNGGY RVL T+PR+GDNAKMAVIELV
Sbjct:   37 SAFTGYGMATLQQAPPTTISRTKSNLDMMRHRKGFKKLGKPADQRKALLRALTTEIIRHGRIKTTLVRARAVRKHVDHMITLGKRGDLHARRQAMSWVYDKNLVHALFDAAPERYGDRNGGYTRVLRTVPRQGDNAKMAVIELV 180          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A7S2CVF2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVF2_9STRA)

HSP 1 Score: 169 bits (427), Expect = 4.180e-50
Identity = 84/132 (63.64%), Postives = 98/132 (74.24%), Query Frame = 0
Query:   75 SVEQRETVVDRSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            S + R  +  R  + M+RHG+R+ KLG PADQRKALLR LT          TTL RAKA+R  VD MI LSK+GSLH+RRQAM +IYDK+LVHALFE+  ERY DR GGYCRVL TMPR+GDNAKM +IELV
Sbjct:   29 SFQTRSPIATRGSISMMRHGKRMAKLGKPADQRKALLRSLTTEVIRHGRIKTTLVRAKAIRPCVDKMIQLSKDGSLHSRRQAMAFIYDKELVHALFENAPERYADREGGYCRVLRTMPRQGDNAKMGIIELV 160          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A7S0CE24_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE24_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.550e-50
Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 0
Query:   85 RSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            R  L M+RH +++ KLG PADQRKALLR LT          TTL RAKAVRK+VDHMITL K+GSLH+RRQA+ ++YDK LVHALF++  +RYGDR GGYCRVL TMPR+GDNAKMAVIELV
Sbjct:   48 RGDLSMMRHRKKLAKLGKPADQRKALLRALTTEVIRHGRIKTTLIRAKAVRKHVDHMITLGKDGSLHSRRQALAWVYDKNLVHALFDAAPDRYGDREGGYCRVLRTMPRQGDNAKMAVIELV 169          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A6V2NXL1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXL1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.010e-49
Identity = 93/155 (60.00%), Postives = 107/155 (69.03%), Query Frame = 0
Query:   57 ATANVQHGAAVSGFTGYNSVEQRETVV-----DRSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            A AN     ++S FTG +   +   VV      RS L M+RH  ++KKL  PADQRKALLR LT          TTL RAKAVRK+VDHMI L K G LHARRQA+G++YDK LVH+LFE+  ERY DRNGGY RVL TMPR+GDNAKMAVIELV
Sbjct:   12 AAANAFGVGSLSSFTGTSITLEPTYVVRGAPAGRSDLSMMRHRNKLKKLNKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQALGWVYDKDLVHSLFEAAPERYSDRNGGYTRVLRTMPRQGDNAKMAVIELV 166          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: K0TAZ9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAZ9_THAOC)

HSP 1 Score: 169 bits (428), Expect = 2.820e-49
Identity = 91/145 (62.76%), Postives = 102/145 (70.34%), Query Frame = 0
Query:   67 VSGFTGYNSVEQRETVV-----DRSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            VS FTG +     E          S L+M+RH +RV KLG PADQRKALLR LT          TT  RAKAVRK+VDHM+ L K G LHARRQA+G+IYDK LVHALFE+  ERYG+RNGGY RVL TMPR+GDNAKMAVIELV
Sbjct:   90 VSSFTGTHISTVMEPAARAHHSKSSSLEMMRHRKRVPKLGKPADQRKALLRALTTEIIRHGRIKTTAVRAKAVRKHVDHMVELGKRGDLHARRQALGWIYDKDLVHALFEAAPERYGERNGGYTRVLRTMPRQGDNAKMAVIELV 234          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A7S4HPH3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPH3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 4.220e-49
Identity = 97/162 (59.88%), Postives = 113/162 (69.75%), Query Frame = 0
Query:   45 ASSFMLAAPGLAATANVQHGAAVSGFTGYNSVEQRETVVDRSMLQMIRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            AS+F + AP  +A ++   GAAVS  T       RET  D SM+   RH ++V KLG PADQRKALLR LT          TTL RAKAVRK+VDHMI L K G LHARRQA+G++YDK LVH+LFE+  ERY DR GGY RVL TMPR+GDNAKMA+IELV
Sbjct:   14 ASAFGVGAPAFSAKSSFA-GAAVSEST----CVARETRGDMSMM---RHRKKVAKLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIQLGKRGDLHARRQALGWMYDKDLVHSLFEAAPERYSDREGGYTRVLRTMPRQGDNAKMAIIELV 167          
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Match: A0A2V3IJG3_9FLOR (50S ribosomal protein L17, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJG3_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 4.630e-49
Identity = 84/116 (72.41%), Postives = 92/116 (79.31%), Query Frame = 0
Query:   91 IRHGRRVKKLGLPADQRKALLRGLTXXXXXXXXXXTTLARAKAVRKNVDHMITLSKNGSLHARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKMAVIELV 206
            IRHG+RV KL  PADQRKALLR LT          TT ARA+AVRK+ DHMITL+KNGSLHARRQA+GYIYDK+LVHALFE   ERY DRNGGY RVL TMPR+GDNA M +IELV
Sbjct:   89 IRHGKRVPKLNKPADQRKALLRALTTELIRHGRIKTTHARAQAVRKHADHMITLAKNGSLHARRQALGYIYDKQLVHALFEQAPERYADRNGGYTRVLRTMPRRGDNAPMGIIELV 204          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig104.79.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G590_ECTSI2.950e-6770.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CL42_9STRA7.980e-5466.90Ribosomal protein L17 n=1 Tax=Tribonema minus TaxI... [more]
Q5K251_GUITH6.440e-5170.2550S ribosomal protein L17 n=2 Tax=Guillardia theta... [more]
A0A7S1DX23_9STRA9.650e-5163.19Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A7S2CVF2_9STRA4.180e-5063.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0CE24_9STRA5.550e-5068.03Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A6V2NXL1_9STRA1.010e-4960.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
K0TAZ9_THAOC2.820e-4962.76Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4HPH3_9STRA4.220e-4959.88Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A2V3IJG3_9FLOR4.630e-4972.4150S ribosomal protein L17, chloroplastic n=1 Tax=G... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 110..206
e-value: 6.2E-34
score: 116.8
IPR000456Ribosomal protein L17TIGRFAMTIGR00059TIGR00059coord: 97..206
e-value: 1.4E-39
score: 132.9
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 72..206
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 124..146
IPR000456Ribosomal protein L17HAMAPMF_01368Ribosomal_L17coord: 95..206
score: 25.08625
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10Ribosomal protein L17coord: 82..206
e-value: 1.4E-45
score: 156.3
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 91..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig104contigA-nodosum_M_contig104:771837..774034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig104.79.1mRNA_A-nodosum_M_contig104.79.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig104 771156..774300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig104.79.1 ID=prot_A-nodosum_M_contig104.79.1|Name=mRNA_A-nodosum_M_contig104.79.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=207bp
MRVLSMWDRAPKNRREQNCGELRRTLYYFLVQEVIFHLQWGPDPASSFML
AAPGLAATANVQHGAAVSGFTGYNSVEQRETVVDRSMLQMIRHGRRVKKL
GLPADQRKALLRGLTTQIIRHGRIVTTLARAKAVRKNVDHMITLSKNGSL
HARRQAMGYIYDKKLVHALFESGAERYGDRNGGYCRVLHTMPRKGDNAKM
AVIELV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000456Ribosomal_L17
IPR036373Ribosomal_L17_sf