prot_A-nodosum_M_contig104.45.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig104.45.3
Unique Nameprot_A-nodosum_M_contig104.45.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1019
Homology
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: D7G5A4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A4_ECTSI)

HSP 1 Score: 1105 bits (2859), Expect = 0.000e+0
Identity = 650/1034 (62.86%), Postives = 754/1034 (72.92%), Query Frame = 0
Query:    1 MLYVDGNVTDAARILSDIVVQCSSIPEPYALLALIFNDVGKHREALQFYKLASTRDPRKLGHHREVARIAGILGDHESRLEALKLLTRLQPTNLNVAIERARCLLDLQKPKQALDVYAKAAKRFPRNYDIYLDLAEGVECVSPQQHIFVHQALASCLRRTTGKKHLGPDVRDLADAFAAKLRDIKLEHPKPKRLPPRRTGLPSKRVGEVALTATDLLVAKLMESRKRQDPQYEVAVQVVEGLVSWLDSCRKIANRAEAEYESGEEMLSDEEE---DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEDGEPMDRFILYPTTLLRYGICQLYCGEEEKAAKAFAFLNHEEPDGPHGDMMLEVAKAYAETDHEEESQVLLQQVAQSKHPRHRLASIQLGAAYVAQGKHELAAETYTTVLAERPHHAAALAGLAEAAYWRGTSAIPSVLKLLTPAIDRATRTWTKEIPEHTPI--DEEGEEPNGFQRLQLLIQWATLSKMDGNAADFACVALPLVTAALGQWEQRQEFELQSVGEAALGQGVVADAGLQRDRSVAEPGIVQSGQITEGGGQGSSEKAQAAVWKPRAVPSVLGKMRWEVDLRGRISSLAARSLEEVDVVAGVGRRVVFWHLIELVRCLHELGNSAEVGKIVAAAVKPNGILRGLEKKDLQVAAVNNDSAIFSTMPGNSPILGPAPRERFVLGPLCATESSA---GDEA--SVKAFPEDYYPPPWRNVEERDGEGTSLRGGRAWQPANRSLFSSR-RRSRSRALMELSERNNDGDSLCALVRALSRTPGNDAMWNLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATN----VTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGD-GLTKETAHNLCALYKKSGATAMALRILRKYLSVG 1018
            MLYV G V +A+  LS++V+QCSSIPEPYALLA+I+ D GKH EAL FYKLA  RD +  G+H+EVARIAGILGDH SRLEALK+L RL+P +LNVAIERARCLL+LQK KQALDVYAKAAKRFPR  DIYLDLAE VECVSPQQ+IFVHQALASCLRR  GK++LGPDVRDLAD F+A+LR+IKLEHPKPKRLP RR GLPSKR GEVA+TAT LLV KLMESRKRQ+PQYEVAVQVVEGL SWL+SC +IA R + EYESGE    DE E   +   XXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  E+ EPMD F L P  +LRYGICQLYCGE+EKA  A  FL  EE DGPHG MMLEVAK YAET +  ES  LL+ VAQSKHPRHRLAS+QLGAAY +QGKHELA+ TY+ VLAERPHHAAALAG+AEAAYWRG   +P+ L  L+ A++RAT+ WT      +P   D+EGE+   FQRLQLL+QWATLS M+ N ADFACVA+PLV+ ALGQ  QRQEFE Q                                                   KP  VP V  +   E    GR                 VGRR VFWHL+E+VR L  LG+SAEV K+V AA++PNG+LRGLEK+DLQ    N D+A+  TMPG SPI GPA RE F+LGP    + SA   GD++  +V    E YYPPPWR VEE+D +G   R GRAW+P  RSL  +  RRSR RALMEL ER +DGD++C  VRALSR PGNDA+WNL+QRVA ERG+E ADG FHGE+V ALVSRHRE+ QGLL+R +DA IWNR+K AL+LY  AHA RPEEPLP+LCLA  I R VTVM+TMVEN  +CVLQ LA LHRYA +R  QA +        GS + +   T +PEAVL+QEI+YNLGR +HQ GL + A+EYY+RAL+++DERGD LR W G D G+TKETAHN+CALYK++G TAMAL +L KYL+VG
Sbjct:   98 MLYVKGKVVEASTELSEVVIQCSSIPEPYALLAMIYQDGGKHEEALMFYKLACARDTKNWGNHQEVARIAGILGDHTSRLEALKVLARLRPNDLNVAIERARCLLELQKSKQALDVYAKAAKRFPRKLDIYLDLAECVECVSPQQNIFVHQALASCLRRVVGKRYLGPDVRDLADGFSARLREIKLEHPKPKRLPARRPGLPSKREGEVAMTATALLVGKLMESRKRQEPQYEVAVQVVEGLGSWLNSCHRIACRDDLEYESGEGGEEDELEGDGELDSXXXVRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEDEPMDTFELDPEIVLRYGICQLYCGEKEKADNALLFLKDEEADGPHGHMMLEVAKVYAETGYLVESLELLRNVAQSKHPRHRLASVQLGAAYASQGKHELASNTYSVVLAERPHHAAALAGIAEAAYWRGKGTVPAALSALSTAVERATKAWTDGGLAASPAEDDDEGEDATAFQRLQLLMQWATLSLMENNRADFACVAVPLVSVALGQLVQRQEFEQQ---------------------------------------------------KPPPVPPVRSQ---ETARSGRAGPTKPGLPSGSKQGEQVGRRAVFWHLVEVVRSLKALGSSAEVKKLVDAALQPNGLLRGLEKEDLQAVVANADTAVLRTMPGGSPIHGPASREGFLLGPAITGDPSANPDGDDSPTAVALMSEQYYPPPWRCVEEKDDDGLPRRAGRAWRPPTRSLHGTGPRRSRGRALMELDERKDDGDAICTTVRALSRRPGNDAVWNLMQRVAMERGVEQADGGFHGEQVEALVSRHRERPQGLLHRAHDAAIWNRAKHALRLYSHAHATRPEEPLPILCLAMHICRTVTVMETMVENDGVCVLQALACLHRYAHLRKEQAQSAGEEDPTVGSTSGSADAT-IPEAVLEQEIMYNLGRAYHQVGLPELAMEYYSRALQVKDERGDELRSWQGSDDGVTKETAHNMCALYKRNGQTAMALSVLNKYLAVG 1076          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A0A5J9W545_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9W545_9POAL)

HSP 1 Score: 77.4 bits (189), Expect = 1.130e-10
Identity = 66/241 (27.39%), Postives = 111/241 (46.06%), Query Frame = 0
Query:  789 ALSRTPGNDAMWNLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMED----------ERGDVLRK--WHGGDGLTKETAHNLCALYKKSGATAMALRILRKYLSV 1017
            A+ + P + + WN   +VA+ R  + +  +F    +L       + V  ++  G+     ++ + A + Y +A+ L PE PL  LC+ T +I +   +   ++N + C++QG A+L++Y            + G+               +QE LYN+ R +H  GL   A  YY +AL  E           E G    +    G   + +E A NL  +YKKSGAT +A RIL+ Y +V
Sbjct:  702 AVKQHPYSFSAWNSYYKVAS-RIEDASTNKF----ILRTREGKADCVPPIIISGHRFTALSQHQAAARDYLEAYKLEPENPLINLCIGTALINL--ALGFRLQNKNQCIVQGFAFLYKYL----------RLCGN---------------KQEALYNIARAYHHIGLITLAAVYYEKALATEVKDLPIPKLPYESGSCAEQDLRPGYCDVRREAAFNLHLIYKKSGATDLARRILKTYCTV 910          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: W7TY69_9STRA (Transcription factor iiic-gamma subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY69_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.090e-10
Identity = 70/265 (26.42%), Postives = 118/265 (44.53%), Query Frame = 0
Query:  773 LSERNNDGDSLCAL---VRALSRTPGNDAMWNLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVT-----------------GSDATTTSPTPVPEAV--LQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGDGLTKETAHNLCALYKKSGATAMALRILRKYL 1015
            LS   N+ D   A+   + +LS  P +    N L R+  +     A+       +  +  +  E +   L  GN   +    + AL  +  A+ + P EPL  L  A L++R+++    +  +   C+++ LA+L +YA +R+ Q    +V                  G D        V  A   L+QE++YN+GR  HQAGL   A+ +Y  AL + D   + LR   G   +T+E A NL  +YK+     +A  ++ +YL
Sbjct:  775 LSHAVNEDDYSSAIKSCIVSLSALPTSIERGNALNRLVRKATRADANRAV----IRRMAHKTPESLPLALLSGNAFALSRNYQMALDKFLGAYRMAPSEPLVTLAAAALLMRVLSHRKLVARHG--CLVKCLAFLEQYARLRLVQGVEEDVLKREAGDGGGMEDSNGAHGRDMEERGERLVKGATRALEQEVVYNMGRAFHQAGLLHMAVPFYQDALTIFDRYQEELRTVDGKGHVTREAAWNLVCIYKEGECRELARLVVGRYL 1033          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: UPI001F5E251A (general transcription factor 3C polypeptide 3 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5E251A)

HSP 1 Score: 74.7 bits (182), Expect = 7.670e-10
Identity = 64/239 (26.78%), Postives = 105/239 (43.93%), Query Frame = 0
Query:  790 LSRTPGNDAMWNLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGDG------------LTKETAHNLCALYKKSGATAMALRILRKYLS 1016
            + + P + + WN   +V       T+  E    K L    R+   V   +  GN      + + A + Y +A+ L PE P   LC+ + ++ +   +   ++N + C++Q  A+L  Y  +RI         GS+              +QE LYN+ R +H  GL   A+ YY + L ME +   + ++    D             L +E A NL  +YK+SGAT +A RIL+ Y S
Sbjct:  709 VQKHPHSVSAWNFYYKV-------TSRDEKRQSKFLLRARRYPNCVPPKIISGNQFTEIKQHQSATRDYLEAYKLDPENPFINLCVGSSLVNL--SLGFRLQNKNQCIVQAFAFL--YQCLRI---------GSN--------------RQEALYNIARAYHHVGLKTLAVIYYEKVLAMEVKDEPIPKRPFEEDAQQQQDLRPGYCDLRREAAFNLHLIYKESGATDLARRILKTYCS 913          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A0A3B6LTB8_WHEAT (Uncharacterized protein n=17 Tax=Triticeae TaxID=147389 RepID=A0A3B6LTB8_WHEAT)

HSP 1 Score: 74.3 bits (181), Expect = 1.000e-9
Identity = 74/255 (29.02%), Postives = 113/255 (44.31%), Query Frame = 0
Query:  788 RALSRTPGND-------------AMWNLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGD------------GLTKETAHNLCALYKKSGATAMALRILRKYLSV 1017
            RAL  +PG D             + WN   +V T R  E   G F   K L    R  + V   +  G+     ++ + A++ Y +A+ L PE PL  LC+ + +I +   +   ++N + C++Q  A+L  Y  +RI         GS+              +QE LYN+ R +H  GL   A+ YY + L ME E   + +     D             L +E A NL  +YK+SGAT +A RIL+ Y S+
Sbjct:  686 RALDPSPGFDYVRYVVHKHPQSISAWNSYYKV-TSRTEEK--GHF---KFLLRARRDPKCVPPKIISGHRFTAISQHQSAVRDYLEAYKLDPENPLINLCVGSSLINL--SLGFRLQNKNQCIVQAFAFL--YKCLRI---------GSN--------------RQEALYNIARAYHHVGLKTLAVIYYEKVLAMEVEDHPIPKLPFEEDLQEHQDFRPGYCDLRREAAFNLHLIYKESGATDLARRILKTYCSI 907          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A0A811R787_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811R787_9POAL)

HSP 1 Score: 73.6 bits (179), Expect = 1.660e-9
Identity = 57/210 (27.14%), Postives = 98/210 (46.67%), Query Frame = 0
Query:  820 HGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLR-KWHGGD-----------GLTKETAHNLCALYKKSGATAMALRILRKYLSV 1017
            H + +L       + V  ++  G+     ++ + A + Y +A+ L PE PL  LC+ T +I +   +   ++N + C++Q  A+L+RY  +R+   +                       QE LYN+ R +H  GL   A  YY +AL +E++   + +  +  G             + +E A NL  +YKKSGAT +A RIL+ Y +V
Sbjct:  660 HFKHLLRTREAKPDCVPPIIISGHRFTAISQHQSATRDYLEAYKLDPENPLINLCVGTALISL--TLGFRLQNKNQCIVQAFAFLYRY--LRLCDNS-----------------------QEALYNIARAYHHIGLNTLAAIYYEKALAIEEKDHPIPKLPYEAGSRVPEDLRPGYCDVRREAAFNLHLIYKKSGATDLARRILKTYCTV 842          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A0A1B6PG82_SORBI (Uncharacterized protein n=13 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PG82_SORBI)

HSP 1 Score: 73.6 bits (179), Expect = 1.740e-9
Identity = 56/210 (26.67%), Postives = 98/210 (46.67%), Query Frame = 0
Query:  820 HGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLR-KWHGGD-----------GLTKETAHNLCALYKKSGATAMALRILRKYLSV 1017
            H + +L       + V  ++  G+     ++ + A + Y +A+ L PE PL  LC+ T +I +   +   ++N + C++Q  A+L+RY  +R+   +                       QE LYN+ R +H  GL   A  YY +AL +E++   + +  +  G             + +E A NL  +YKKSGAT +A RIL+ Y ++
Sbjct:  730 HFKHLLRTREAKPDCVPPIIISGHRFTAISQHQSAARDYLEAYKLDPENPLINLCVGTALISL--TLGFRLQNKNQCIVQAFAFLYRY--LRLCDNS-----------------------QEALYNIARAYHHIGLNTLAAVYYEKALAIEEKDHPIPKLPYEAGSRVPEDLRPGYCDVRREAAFNLHLIYKKSGATDLARRILKTYCTI 912          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A0A4D9D396_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D396_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.500e-9
Identity = 68/265 (25.66%), Postives = 118/265 (44.53%), Query Frame = 0
Query:  773 LSERNNDGDSLCAL---VRALSRTPGNDAMWNLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNRSKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVT-----------------GSDATTTSPTPVPEAV--LQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGDGLTKETAHNLCALYKKSGATAMALRILRKYL 1015
            LS   N+ D   A+   + +LS  P +    N L R+  +     A+       +  +  +  E +   L  GN   +    + AL  +  A+ + P EPL  L +A L++R+++    +  +   C+++ LA+L +YA +R+ Q    +V                  G D        V  A   L+QE++YN+GR  HQAGL   A+ +Y  AL + D   + LR       +T+E A NL  +Y++     +A  ++ +YL
Sbjct: 1129 LSHAVNEDDYSSAIKSCIVSLSALPTSIERGNALNRLVRKATRADANRAV----IRRMAHKTPESLPLALLSGNAFALSRNYQMALDKFLGAYRMAPSEPLVTLAVAALLMRVLSHRKLVDRHG--CLVKCLAFLEQYARLRLVQGVEEDVLKREAGDGGGMEDSNGAHGRDMEERGERLVKGATRALEQEVVYNMGRAFHQAGLLHMAVPFYQDALTIFDRYQEELRTVDDKGYVTREAAWNLVCIYREGECRELARLVVERYL 1387          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A0A3L6RLW2_PANMI (General transcription factor 3C polypeptide 3 n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RLW2_PANMI)

HSP 1 Score: 70.9 bits (172), Expect = 1.210e-8
Identity = 51/172 (29.65%), Postives = 79/172 (45.93%), Query Frame = 0
Query:  858 YRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLR-KWHGGD-----------GLTKETAHNLCALYKKSGATAMALRILRKYLSV 1017
            Y +A+ L PE P   LC+ T +I +       ++N + C++Q  A+L+RY            + G                 QE LYN+ R +H  GL   A  YY +AL +E+E   + +  +  G             + +E A NL  +YKKSGAT +A R+L+ Y +V
Sbjct:  836 YLEAYKLDPENPFINLCVGTALISLAH--GFRLQNKNQCIVQAFAFLYRYL----------RLCGDS---------------QEALYNIARAYHHIGLNTLAAVYYEKALTIEEEDHPIPKLPYEAGSCAQEDLRPGYCDVRREAAFNLHLIYKKSGATDLARRVLKTYCTV 980          
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Match: A8NKP1_COPC7 (Uncharacterized protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8NKP1_COPC7)

HSP 1 Score: 67.4 bits (163), Expect = 1.190e-7
Identity = 44/147 (29.93%), Postives = 69/147 (46.94%), Query Frame = 0
Query:  871 PMLCLATLIIRMVTVMDTMVENSDLCVLQGLAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVHHQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGDGLTKETAHNLCALYKKSGATAMALRILRKYLSV 1017
            PM+CL   I  +   M    +N    + QG+A+L +Y  +R                      P  V  +E+ YN GR+ HQ GL  +A++ Y R L + +  GD L          KE A+NL  +Y  +GAT +A ++ R++LS+
Sbjct:  588 PMICLCLAIASVGRAMQRQSDNRHHLIAQGMAFLSQYRALRSKS-------------------PRTV--REVEYNFGRIFHQLGLYSYAVKQYERVLELAERDGDDL--------YAKEAAYNLSLIYVFTGATPLADKLYRRWLSL 705          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig104.45.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7G5A4_ECTSI0.000e+062.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5J9W545_9POAL1.130e-1027.39Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
W7TY69_9STRA2.090e-1026.42Transcription factor iiic-gamma subunit n=1 Tax=Na... [more]
UPI001F5E251A7.670e-1026.78general transcription factor 3C polypeptide 3 n=1 ... [more]
A0A3B6LTB8_WHEAT1.000e-929.02Uncharacterized protein n=17 Tax=Triticeae TaxID=1... [more]
A0A811R787_9POAL1.660e-927.14Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
A0A1B6PG82_SORBI1.740e-926.67Uncharacterized protein n=13 Tax=Andropogoneae Tax... [more]
A0A4D9D396_9STRA3.500e-925.66Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A3L6RLW2_PANMI1.210e-829.65General transcription factor 3C polypeptide 3 n=1 ... [more]
A8NKP1_COPC71.190e-729.93Uncharacterized protein n=1 Tax=Coprinopsis cinere... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
NoneNo IPR availablePFAMPF13432TPR_16coord: 405..444
e-value: 1.9E-4
score: 21.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..301
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 940..973
e-value: 0.033
score: 23.3
coord: 26..59
e-value: 0.99
score: 18.4
coord: 94..127
e-value: 15.0
score: 13.3
coord: 399..432
e-value: 0.4
score: 19.7
coord: 835..868
e-value: 15.0
score: 13.5
IPR019734Tetratricopeptide repeatPFAMPF13176TPR_7coord: 943..975
e-value: 2.1E-4
score: 21.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 940..973
score: 10.6794
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 399..432
score: 8.5554
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 26..59
score: 8.1424
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 311..468
e-value: 2.3E-10
score: 41.9
coord: 760..1017
e-value: 9.5E-12
score: 46.5
coord: 1..140
e-value: 2.2E-15
score: 58.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 829..1015
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 89..444
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..131
IPR039340Transcription factor Tfc4/TFIIIC-102/Sfc4PANTHERPTHR23082TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATEDcoord: 2..1017

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig104contigA-nodosum_M_contig104:431637..435798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig104.45.3mRNA_A-nodosum_M_contig104.45.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig104 428437..436276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig104.45.3 ID=prot_A-nodosum_M_contig104.45.3|Name=mRNA_A-nodosum_M_contig104.45.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1019bp
MLYVDGNVTDAARILSDIVVQCSSIPEPYALLALIFNDVGKHREALQFYK
LASTRDPRKLGHHREVARIAGILGDHESRLEALKLLTRLQPTNLNVAIER
ARCLLDLQKPKQALDVYAKAAKRFPRNYDIYLDLAEGVECVSPQQHIFVH
QALASCLRRTTGKKHLGPDVRDLADAFAAKLRDIKLEHPKPKRLPPRRTG
LPSKRVGEVALTATDLLVAKLMESRKRQDPQYEVAVQVVEGLVSWLDSCR
KIANRAEAEYESGEEMLSDEEEDLDSDSDVRESDEEGSDVEEADSGVDEE
GASVEENVQGNDQEDEDGEPMDRFILYPTTLLRYGICQLYCGEEEKAAKA
FAFLNHEEPDGPHGDMMLEVAKAYAETDHEEESQVLLQQVAQSKHPRHRL
ASIQLGAAYVAQGKHELAAETYTTVLAERPHHAAALAGLAEAAYWRGTSA
IPSVLKLLTPAIDRATRTWTKEIPEHTPIDEEGEEPNGFQRLQLLIQWAT
LSKMDGNAADFACVALPLVTAALGQWEQRQEFELQSVGEAALGQGVVADA
GLQRDRSVAEPGIVQSGQITEGGGQGSSEKAQAAVWKPRAVPSVLGKMRW
EVDLRGRISSLAARSLEEVDVVAGVGRRVVFWHLIELVRCLHELGNSAEV
GKIVAAAVKPNGILRGLEKKDLQVAAVNNDSAIFSTMPGNSPILGPAPRE
RFVLGPLCATESSAGDEASVKAFPEDYYPPPWRNVEERDGEGTSLRGGRA
WQPANRSLFSSRRRSRSRALMELSERNNDGDSLCALVRALSRTPGNDAMW
NLLQRVATERGMETADGEFHGEKVLALVSRHREQVQGLLYRGNDAVIWNR
SKQALKLYRQAHALRPEEPLPMLCLATLIIRMVTVMDTMVENSDLCVLQG
LAWLHRYADVRIPQAAATNVTGSDATTTSPTPVPEAVLQQEILYNLGRVH
HQAGLTDHAIEYYNRALRMEDERGDVLRKWHGGDGLTKETAHNLCALYKK
SGATAMALRILRKYLSVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR039340Tfc4/TFIIIC-102/Sfc4