prot_A-nodosum_M_contig1033.31.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1033.31.1
Unique Nameprot_A-nodosum_M_contig1033.31.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length641
Homology
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 3.330e-97
Identity = 226/474 (47.68%), Postives = 270/474 (56.96%), Query Frame = 0
Query:  169 LMVIVAIVVGCGVLTLVILCIVRKIMDLCLMRFDPTGSISYSQEEGLPKATIERLPQTRYRKPPPKVQVKAARIGAKHDGPASVG--------AAAVTEGDVPSVGMTEAGEEGGSTNSVPVVTASAAAEAEESAADARDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEVRKSCCERVMRSASDRLGIRLVAPTTVRFSSSRRTYTNRDVHDAMGPSLPPSYGQSDVDYVGSMVGTMVDSHRGGNTADEETGEAPGGSAAGARLG----------------VGSRSESATRIPSGRGGVAAGGEGQQDEPQGAIVVQPVAGSSFLVVPREFSSGAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIGPASGMVVAEGGREGEEKGGXXGDPQARTASRTNVGAGRSRSRGRRGSSRGGSRRAGGGVRDGLGGVVFGGNTQEFKEAEA 618
            +++ ++IVVGCGVLTL++LC+VRK+MDLCL+R DPTGS+ YSQEEGL K +IERLPQTRY++P   V   A + G K   PAS G        AAA  EG V   G    G  G ST + P     A AE  E    ARDSTEDMCAICL+EYE GD+LRIIPGC H FHKECIDPWLETKAVCAYCKA VE R++CC+RV RS SDRLGI LVAPTT+RFSSSRRTYTN DV  AMGP+LP SYG S++DYVGS V     S       D E GE  GG A                       GS S  +TR     G +    +G Q  PQG+IVVQP +  S++VVPRE+S G  G+                                G ++  + +   R    +G      QA  A+          +  RRGS +G S        DG GGVVFGGNT+EF+EA A
Sbjct:   59 MLITISIVVGCGVLTLILLCVVRKVMDLCLLRNDPTGSLRYSQEEGLTKRSIERLPQTRYKRP---VSGTAQKKGDKKT-PASDGKKPDDTEAAAAGEEGGV--TGSDLHGPPGSST-AAPKTAVVAGAEGGEGEG-ARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQAS------VDVEAGE--GGEAEAXXXXXXXXXXXXXXFXXXXPAGSGSTRSTR-----GAIVLPDQGGQ--PQGSIVVQPASAPSYVVVPREYSLGGDGI-------------------DEEYPGNGGEGLAGSSTRELASSAARASTTEGLPDDVAQATDATEEKEEIVAEAAEERRGSHKGFS--------DGRGGVVFGGNTEEFREAAA 482          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 5.690e-95
Identity = 218/468 (46.58%), Postives = 264/468 (56.41%), Query Frame = 0
Query:  169 LMVIVAIVVGCGVLTLVILCIVRKIMDLCLMRFDPTGSISYSQEEGLPKATIERLPQTRYRKPPPKVQVKAARIGAKH----DGPASVGAAAVTEGDVPSVGMTEAGEEGGSTNS-----------VPVVTASAAAEAEESAADARDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEVRKSCCERVMRSASDRLGIRLVAPTTVRFSSSRRTYTNRDVHDAMGPSLPPSYGQSDVDYVGSMVG---TMVDSHRGGNTADEETGEAPGGSAAGARLGVGSRSESATRIPSGRGGVAAGGEGQQDEPQGAIVVQPVAGSSFLVVPREFSSGAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIGPASGMVVAEGGREGEEKGGXXGDPQARTASRTNVGAGRSRSRGRRGSSRGGSRRAGGGVRDGLGGVVFGGNTQEFKEAEA 618
            +++ ++IVVGCGVLTL++LC+VRK+MDLCL+R DPTGS+ YSQEEGL K +IERLP+TRY++P   V   A + G K     DG    G  A             AGEEGG T S            P      AAE  E    ARDSTEDMCAICL+EYE GD+LRIIPGC H FHKECIDPWLETKAVCAYCKA VE R++CC+R+ RS S+RLGI LVAPTT+RFSSSRRTYTN DV  AMGP+LP SYG S++DYVGS V      VD   G     E T      +A G   G G  + S +   S RG +    +G Q + +G+IVVQP +  S++VVPRE+S G GG+                             +   P       +   E EE       P+ R                 RGS +G S        DG GGVVFGGNT+EF+EAEA
Sbjct:  252 MLITISIVVGCGVLTLILLCVVRKVMDLCLLRNDPTGSLRYSQEEGLTKRSIERLPETRYKRP---VSGSAQKKGGKKTPAADGKKPDGTEAAA-----------AGEEGGVTGSDLHGAPAGRTGAPQTAVVLAAEGGEREG-ARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGVEAEATTPITADAAPGQAFGGGGPARSGS-TRSTRGAIVLPDQGGQPQ-EGSIVVQPASAPSYVVVPREYSLG-GGIDNEHPGNGGEGPVGSSMRELTSSSARASATERPPDEVARATDATEEKEEI--VAEAPEER-----------------RGSQKGFS--------DGRGGVVFGGNTEEFREAEA 674          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A8J5S5L1_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S5L1_ZIZPA)

HSP 1 Score: 78.6 bits (192), Expect = 6.550e-12
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  306 CAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVE 352
            CA+CL+E+E GDDLR++P C H FH ECIDPWLET+  C  C+A +E
Sbjct:  128 CAVCLMEFEDGDDLRLLPHCSHAFHPECIDPWLETRVTCPLCRANLE 174          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.430e-11
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  305 MCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATV 351
            MCAICL ++E GD LR++P C H +HK C+DPWLETKA+C  CK  V
Sbjct:  250 MCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A836C7Z7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.460e-11
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  306 CAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATV 351
            CAICL E+E GD LR++P C HH+HK C+DPWLE++ +C  CK  V
Sbjct:  121 CAICLNEFETGDVLRVVPRCNHHYHKACLDPWLESRGICPLCKQLV 166          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: UPI001F5CDF93 (E3 ubiquitin-protein ligase EL5-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CDF93)

HSP 1 Score: 72.0 bits (175), Expect = 5.760e-11
Identity = 26/54 (48.15%), Postives = 41/54 (75.93%), Query Frame = 0
Query:  297 DARDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKAT 350
            +A DST   CA+CL +YEHG++LR++PGC+H FH++C+D WL  +  C  C+++
Sbjct:   89 EAADST--RCAVCLADYEHGEELRLLPGCRHSFHRQCVDVWLRRRPSCPLCRSS 140          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A5N6PVR7_9ASTR (RING-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PVR7_9ASTR)

HSP 1 Score: 72.0 bits (175), Expect = 1.400e-10
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  306 CAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEVRKSCCERVMRSASDRLGIRLVAPT 377
            C +CL  +E G  +R +P CKHHFH ECID WLE+++ C  C+  VE+ K     + R  S R G R+  P+
Sbjct:  113 CTVCLSSFEDGQMIRALPSCKHHFHAECIDKWLESQSSCPVCRHEVELVKPTIPSLPREPSVRFGERVGPPS 184          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A2I0VWT2_9ASPA (RING-type E3 ubiquitin transferase n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VWT2_9ASPA)

HSP 1 Score: 69.3 bits (168), Expect = 3.700e-10
Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 0
Query:  300 DSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKA-TVEVRKSCCERVMRSASDRLG 370
            D  + MCA+CL E+  G+++R++P CKH+FH +CID WL++ + C  C+A TV+V     + V R+ +D  G
Sbjct:   71 DDGDQMCAVCLSEFADGENIRLLPECKHYFHVKCIDKWLQSHSSCPVCRARTVDVTGDEKKTVRRAVTDVYG 142          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A5N6PXK1_9ASTR (RING-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PXK1_9ASTR)

HSP 1 Score: 71.2 bits (173), Expect = 4.360e-10
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  306 CAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEVRKSCCERVMRSASDRLGIRLVAPT 377
            C +CL  +E G  +R +P CKHHFH ECID WLE+++ C  C+  VE+ +     + R  S R G R+  P+
Sbjct:  114 CTVCLSSFEDGQMIRALPSCKHHFHVECIDKWLESQSTCPVCRHEVELVRPTIPSLPREPSVRFGERVGPPS 185          
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Match: A0A1S3UJJ9_VIGRR (RING-type E3 ubiquitin transferase n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A1S3UJJ9_VIGRR)

HSP 1 Score: 69.3 bits (168), Expect = 5.050e-10
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0
Query:  292 EESAADARDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKA 349
            +E  A+ +D  +D CA+CL E+E G++LR +P C H FH  CIDPWL +++ C  C+A
Sbjct:   75 DEMPAEGQDDEDDTCAVCLGEFEDGEELRTLPECMHSFHVACIDPWLSSRSSCPVCRA 132          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1033.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEX7_ECTSI3.330e-9747.68RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KYP0_9PHAE5.690e-9546.58RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5S5L1_ZIZPA6.550e-1261.70RING-type domain-containing protein n=1 Tax=Zizani... [more]
A0A835ZK41_9STRA1.430e-1161.70RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836C7Z7_9STRA4.460e-1158.70RING-type domain-containing protein n=1 Tax=Tribon... [more]
UPI001F5CDF935.760e-1148.15E3 ubiquitin-protein ligase EL5-like n=2 Tax=Loliu... [more]
A0A5N6PVR7_9ASTR1.400e-1043.06RING-type domain-containing protein n=1 Tax=Mikani... [more]
A0A2I0VWT2_9ASPA3.700e-1041.67RING-type E3 ubiquitin transferase n=2 Tax=Dendrob... [more]
A0A5N6PXK1_9ASTR4.360e-1041.67RING-type domain-containing protein n=1 Tax=Mikani... [more]
A0A1S3UJJ9_VIGRR5.050e-1046.55RING-type E3 ubiquitin transferase n=1 Tax=Vigna r... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 306..347
e-value: 1.7E-4
score: 30.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 304..348
e-value: 1.0E-10
score: 41.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 306..348
score: 10.305834
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 270..353
e-value: 7.2E-18
score: 66.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..640
NoneNo IPR availablePANTHERPTHR45798RING-H2 FINGER PROTEIN ATL61-RELATED-RELATEDcoord: 143..355
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 306..348
e-value: 1.90174E-18
score: 76.9569
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 302..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1033contigA-nodosum_M_contig1033:162115..183740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1033.31.1mRNA_A-nodosum_M_contig1033.31.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1033 162107..183740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1033.31.1 ID=prot_A-nodosum_M_contig1033.31.1|Name=mRNA_A-nodosum_M_contig1033.31.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=641bp
MRRVLLITLILNGTARASMNAETNIRGSQLARTPIETMPEELLADIGYGE
VSTRRVTVLAGGSHRVKPEQKHVIIGKGRDRVGEDFDRGMKSTASIAFKR
NAAAAAANSQEAGEGKPDSRAPGPAVGDFDSIQLLKGNDDRPGDETSKED
EGTPQDDTPQDEGDSGENLMVIVAIVVGCGVLTLVILCIVRKIMDLCLMR
FDPTGSISYSQEEGLPKATIERLPQTRYRKPPPKVQVKAARIGAKHDGPA
SVGAAAVTEGDVPSVGMTEAGEEGGSTNSVPVVTASAAAEAEESAADARD
STEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKAT
VEVRKSCCERVMRSASDRLGIRLVAPTTVRFSSSRRTYTNRDVHDAMGPS
LPPSYGQSDVDYVGSMVGTMVDSHRGGNTADEETGEAPGGSAAGARLGVG
SRSESATRIPSGRGGVAAGGEGQQDEPQGAIVVQPVAGSSFLVVPREFSS
GAGGVGGGIGSRSSSVNMSMSSESMAAAAAAAAASRIGPASGMVVAEGGR
EGEEKGGGGGDPQARTASRTNVGAGRSRSRGRRGSSRGGSRRAGGGVRDG
LGGVVFGGNTQEFKEAEAEDRARQEARAGTGPNNLREVTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD