prot_A-nodosum_M_contig1031.48.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1031.48.1
Unique Nameprot_A-nodosum_M_contig1031.48.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length323
Homology
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BLAST of mRNA_A-nodosum_M_contig1031.48.1 vs. uniprot
Match: A0A6H5JS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS72_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 7.660e-19
Identity = 68/200 (34.00%), Postives = 96/200 (48.00%), Query Frame = 0 
Query:    8 ARLFTASWPCFNGNLVDGESPTSKELPWLITDPYCKVTVRALPRGSLQQTSLNSGVAREQEDTFPSVANIAAVADIDRGVGSEDRGVGVDDPIFVESSLLMRNFNSISLSSDGRYSLTLSECHGFMADTTTT----------NTLNGEGF-----EGEAYSDAPLLFLPLPHSIVFDVDDKIPNGRG-VIGNFHLLPIAH 191
            +R+FTA+WP +      GE     +     + PYC+V +R L                         A  +  A I     +   G G  D +FV+  LL+R++NS+SLS DG YSLTLS+CHGF+   T++           + N +G      E +      LLFLPLP SI F+V+ +     G +IGNFHLLP+AH
Sbjct:   42 SRVFTATWPPYTPASTRGEDHQQADRDDRESGPYCQVAIRTLR------------------------ARTSGAAFISSSEATTGHGEG-GDLLFVQPGLLLRSYNSVSLSDDGAYSLTLSDCHGFIPIATSSPDRPASSPPWRSRNHDGGAAGRPEWQMAEIGRLLFLPLPSSIDFEVNRRQATSSGAIIGNFHLLPVAH 216
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BLAST of mRNA_A-nodosum_M_contig1031.48.1 vs. uniprot
Match: D7FIC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC8_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.460e-15
Identity = 62/168 (36.90%), Postives = 83/168 (49.40%), Query Frame = 0 
Query:   40 PYCKVTVRALPRGSLQQTSLNSGVAREQEDTFPSVANIAAVADIDRGVGSEDRGVGVDDPIFVESSLLMRNFNSISLSSDGRYSLTLSECHGFMADTTTT----------NTLNGEGF-----EGEAYSDAPLLFLPLPHSIVFDVDDKIPNGRG-VIGNFHLLPIAH 191
            PYC+V +R L                         A  +  A I     + D+G G  D +FVE  LL+R++NS+SLS DG YSLTLS+C+GFM  TT++           + N +G      E +      +LFLPLP S+ F V+       G VIGNFHLLP+AH
Sbjct:   18 PYCQVAIRTLR------------------------ARTSGAAFISSSEATTDQGEG-GDLLFVERELLVRSYNSVSLSDDGTYSLTLSDCYGFMPITTSSPARRVSSASWRSRNHDGADAGRRERQTAEIVRILFLPLPSSMEFVVNSGQATSSGTVIGNFHLLPVAH 160
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1031.48.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JS72_9PHAE7.660e-1934.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIC8_ECTSI2.460e-1536.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1031contigA-nodosum_M_contig1031:206886..209157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1031.48.1mRNA_A-nodosum_M_contig1031.48.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1031 206157..210403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1031.48.1 ID=prot_A-nodosum_M_contig1031.48.1|Name=mRNA_A-nodosum_M_contig1031.48.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=323bp
MAVGAPRARLFTASWPCFNGNLVDGESPTSKELPWLITDPYCKVTVRALP
RGSLQQTSLNSGVAREQEDTFPSVANIAAVADIDRGVGSEDRGVGVDDPI
FVESSLLMRNFNSISLSSDGRYSLTLSECHGFMADTTTTNTLNGEGFEGE
AYSDAPLLFLPLPHSIVFDVDDKIPNGRGVIGNFHLLPIAHAASTRPTAS
LLSSPTTEIFDALHFRPSVTSQPSVSVANDIPQSSGIRRATTPVGITVTF
GSGFMAGTVAGFVACRLLMGVRVSWWRGRGLWGKCREEISGTNETKEKSI
GGRCSDCTKVERGARRRTHKRR*
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