prot_A-nodosum_M_contig1031.47.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1031.47.1
Unique Nameprot_A-nodosum_M_contig1031.47.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length279
Homology
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BLAST of mRNA_A-nodosum_M_contig1031.47.1 vs. uniprot
Match: D7FID0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.240e-12
Identity = 63/181 (34.81%), Postives = 96/181 (53.04%), Query Frame = 0 
Query:   73 SCWKRVEDLEDEEASLDQQLMKLEKTRRGERMEVLTIEXXCXXAEIRVIKADEETAQLDEQSRAMALTVQDATEDASVAVEAHISSILDGGGNGDPSYRAGGSTELTAVLRNIPFHEEKRQRMTSILQEHESKMRSRIAEVARSAAELRRSKKKREAESLSLGRETTVLREDVAAVADDCE 253
            SCW+RV +LEDEEASL+ +LM+LEK RRGER+E+L +E  C  AE+ +++A +E A LD +S+ +    +D  EDA+              GN   S+ A   T   A+               S L +   ++ S      ++    RR  K+R+AE L L RET +LR+++A +  + E
Sbjct:  357 SCWRRVGELEDEEASLNHRLMRLEKIRRGERLEILGLEQVCQAAEVAMLQAQDEGAHLDAKSQILENLAEDEAEDAAA-------------GNHGASFPASSGTHHDALP-------------ASSLPDSGGRVGS---NEGKAEPPTRRMAKQRDAERLPLERETAILRQELAEMTSEEE 508
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1031.47.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FID0_ECTSI2.240e-1234.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1031contigA-nodosum_M_contig1031:203792..206030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1031.47.1mRNA_A-nodosum_M_contig1031.47.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1031 203792..206030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1031.47.1 ID=prot_A-nodosum_M_contig1031.47.1|Name=mRNA_A-nodosum_M_contig1031.47.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=279bp
CILAFFNGPALGRAKPLSGLYMDLSHSDEFRCPSFAPSRHDEGPQDTCFN
PGDRLQPSTLSERIELLDQETRSCWKRVEDLEDEEASLDQQLMKLEKTRR
GERMEVLTIEQECKSAEIRVIKADEETAQLDEQSRAMALTVQDATEDASV
AVEAHISSILDGGGNGDPSYRAGGSTELTAVLRNIPFHEEKRQRMTSILQ
EHESKMRSRIAEVARSAAELRRSKKKREAESLSLGRETTVLREDVAAVAD
DCEVEAGIVHARQAGEGLRRRLQHAHEKL
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