prot_A-nodosum_M_contig1031.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1031.12.1
Unique Nameprot_A-nodosum_M_contig1031.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length114
Homology
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A183J4F1_9BILA (CYCLIN domain-containing protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183J4F1_9BILA)

HSP 1 Score: 57.4 bits (137), Expect = 1.040e-7
Identity = 30/97 (30.93%), Postives = 51/97 (52.58%), Query Frame = 0
Query:   17 IFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEADASKMASAERVLM 113
            I E G  + +  L M  A     R+YA  S    P   + +AAL +A+K EE PRK++ V+  ++A+ ++      + S KY  +A K+ + E +L+
Sbjct:   52 IQEMGSKLTLSQLCMNTALVFMHRFYAFHSFHRFPRSDIAAAALFLAAKVEECPRKLEYVVKVSHALQHRDNPGLDVKSDKYAEEAQKIVTYENILL 148          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A6J2YR12_SITOR (cyclin-T1 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YR12_SITOR)

HSP 1 Score: 56.6 bits (135), Expect = 6.070e-7
Identity = 31/98 (31.63%), Postives = 52/98 (53.06%), Query Frame = 0
Query:   16 FIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEADASKMASAERVLM 113
            FI + G+ +++  L +  A     R+Y   S  D P Y + +AAL +A+K EE PRK++ V+  A       +S   +NS++Y A +  +   E VL+
Sbjct:   42 FIQDMGQRLKVSQLCINTAIVYMHRFYVFHSFTDFPWYQMAAAALFLAAKVEEQPRKLEYVIRVANICKNPRDSAFDINSERYIAQSQDLVFNENVLL 139          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A7S4MTZ4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MTZ4_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 7.450e-7
Identity = 29/98 (29.59%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   16 FIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEADASKMASAERVLM 113
            F+ ECG+ + +  L +A A     R+YA+ S      + V +  L +ASK EE P+K+K+V+M  Y   +  E      ++++     K+   ER+L+
Sbjct:   60 FLQECGQKLRLPQLSIATAIVFFHRFYARMSYEHYDRFTVATTCLFLASKVEETPKKLKDVVMETYKTQHNQEKAPEPETKEFFELKEKILVCERILL 157          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A834M587_RHYFE (CYCLIN domain-containing protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834M587_RHYFE)

HSP 1 Score: 56.2 bits (134), Expect = 8.280e-7
Identity = 30/98 (30.61%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   16 FIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEADASKMASAERVLM 113
            FI + G+ +++  L +  A     R+Y   S  D P Y + +AAL +A+K EE PRK++ V+  A       +S   +NS++Y   +  +   E VL+
Sbjct:   42 FIQDMGQRLKVSQLCINTAIVYMHRFYVFHSFTDFPWYQMAAAALFLAAKVEEQPRKLEYVIRVANICKNPRDSSFDVNSERYATQSQDLVFNENVLL 139          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A1Y1XDF7_9FUNG (CYCLIN domain-containing protein (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XDF7_9FUNG)

HSP 1 Score: 55.5 bits (132), Expect = 1.520e-6
Identity = 27/70 (38.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   17 IFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIP-TYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGY 85
            ++E GK +      +++A T   R+Y Q  + D P T+ +G A LL+ASKAEE  +K+KE+L  AY + +
Sbjct:   52 MYETGKQLGFPYYTVSSAITYFHRFYEQNLIVDFPETWEIGVACLLVASKAEETVKKLKEILSTAYRIRF 121          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A085MJU0_9BILA (CYCLIN domain-containing protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085MJU0_9BILA)

HSP 1 Score: 53.5 bits (127), Expect = 7.130e-6
Identity = 29/97 (29.90%), Postives = 51/97 (52.58%), Query Frame = 0
Query:   17 IFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEADASKMASAERVLM 113
            I E G+ + +  L    A     R+Y   S    P + + +AAL +A+K EE PRK++ ++  ++A+ ++ ES     S KY  +  K+ + E VL+
Sbjct:   55 IQEVGQKLSLSQLCTNTAIVYMHRFYVFHSFCRFPKFDLAAAALFLAAKVEECPRKLEYLVKVSHALQHRGESSLDSRSDKYMQEVQKIITYENVLL 151          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A1R4AC03_BABMR (Cyclin-L1-1 n=1 Tax=Babesia microti (strain RI) TaxID=1133968 RepID=A0A1R4AC03_BABMR)

HSP 1 Score: 53.1 bits (126), Expect = 9.000e-6
Identity = 24/68 (35.29%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   17 IFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVG 84
            I++ G  + +K++ +A+A  I QR+Y +RSL D       +A   +A+K EE P+++ EV+M  Y +G
Sbjct:   36 IYQVGLKLFLKSVTIASAQAILQRFYYRRSLTDFDIRKTAAACTFLATKLEEDPKRLHEVIMTFYHIG 103          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A7S3TKL7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKL7_9SPIT)

HSP 1 Score: 52.8 bits (125), Expect = 1.210e-5
Identity = 23/66 (34.85%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   16 FIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAY 81
            FI + G+++ +  L +A A     R++A +S  +   +++ + AL +ASK EE PRK+K+V++ AY
Sbjct:   58 FIQDTGRNLRLPQLTIATAMVFYHRFFAFKSYEEHDRFNIATTALFLASKVEETPRKLKDVVIEAY 123          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: A0A7R8X2N1_9CRUS (Cyclin-Q n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8X2N1_9CRUS)

HSP 1 Score: 52.0 bits (123), Expect = 1.710e-5
Identity = 22/63 (34.92%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   15 KFIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVL 77
            KFIFECG+ +E+K+  +  AA +  R++ +  LRD   Y + +A L I+ K+E+   ++++V+
Sbjct:   16 KFIFECGRKLELKSHTICKAAAMYHRFFKEAHLRDYDPYVIAAACLFISGKSEDDRAQIRDVI 78          
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Match: UPI00096B4FED (LOW QUALITY PROTEIN: cyclin-T1-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B4FED)

HSP 1 Score: 52.4 bits (124), Expect = 1.850e-5
Identity = 27/98 (27.55%), Postives = 52/98 (53.06%), Query Frame = 0
Query:   16 FIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDIPTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEADASKMASAERVLM 113
            FI + G+ +++  L +  A     R+Y   S    P + + +AAL +A+K EE PRK++ V+ A +      ++   ++S++Y + A  +   E VL+
Sbjct:   42 FIQDMGQRLKVNQLCINTAIVYMHRFYVFHSFTQFPWHQISAAALFLAAKVEEQPRKLEYVIRAVHICRNPRDTSFDIHSERYLSQAQDLVFNENVLL 139          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1031.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A183J4F1_9BILA1.040e-730.93CYCLIN domain-containing protein n=1 Tax=Soboliphy... [more]
A0A6J2YR12_SITOR6.070e-731.63cyclin-T1 n=1 Tax=Sitophilus oryzae TaxID=7048 Rep... [more]
A0A7S4MTZ4_9EUKA7.450e-729.59Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A834M587_RHYFE8.280e-730.61CYCLIN domain-containing protein n=1 Tax=Rhynchoph... [more]
A0A1Y1XDF7_9FUNG1.520e-638.57CYCLIN domain-containing protein (Fragment) n=1 Ta... [more]
A0A085MJU0_9BILA7.130e-629.90CYCLIN domain-containing protein n=2 Tax=Trichuris... [more]
A0A1R4AC03_BABMR9.000e-635.29Cyclin-L1-1 n=1 Tax=Babesia microti (strain RI) Ta... [more]
A0A7S3TKL7_9SPIT1.210e-534.85Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7R8X2N1_9CRUS1.710e-534.92Cyclin-Q n=1 Tax=Darwinula stevensoni TaxID=69355 ... [more]
UPI00096B4FED1.850e-527.55LOW QUALITY PROTEIN: cyclin-T1-like n=1 Tax=Aethin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 15..114
e-value: 2.1E-5
score: 34.0
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 12..90
e-value: 6.71869E-8
score: 44.5369
NoneNo IPR availableGENE3D1.10.472.10coord: 2..114
e-value: 9.6E-24
score: 85.8
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 10..96
e-value: 6.9E-11
score: 42.0
IPR043198Cyclin/Cyclin-like subunit Ssn8PANTHERPTHR10026CYCLINcoord: 10..112
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 11..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1031contigA-nodosum_M_contig1031:18475..20003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1031.12.1mRNA_A-nodosum_M_contig1031.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1031 18475..20003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1031.12.1 ID=prot_A-nodosum_M_contig1031.12.1|Name=mRNA_A-nodosum_M_contig1031.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=114bp
RSRHDAKTKKHLLHKFIFECGKHMEMKTLVMAAAATICQRYYAQRSLRDI
PTYHVGSAALLIASKAEEFPRKMKEVLMAAYAVGYKTESDRYLNSQKYEA
DASKMASAERVLMC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR043198Cyclin/Ssn8
IPR036915Cyclin-like_sf