prot_A-nodosum_M_contig103.50.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig103.50.1
Unique Nameprot_A-nodosum_M_contig103.50.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length417
Homology
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: D7G1Z1_ECTSI (C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 7.740e-66
Identity = 107/162 (66.05%), Postives = 122/162 (75.31%), Query Frame = 0
Query:    6 GVFSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRKPMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSL 167
            G++ GPV R LS D EFF+EGN  RALL K++VFA++ E     D  ED      HQ  +EC F DC+  FSSLKR E+HYETSHR+RC TCGRSFPTHRLLDLHLSEAHDSFF+AMA R+PMY CLVEGC E F S+GKRH HLV  H YPESFDFSRR +
Sbjct:   11 GLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSEGADAMDLHEDQ-----HQ--FECMFQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHEHLVEAHLYPESFDFSRREM 165          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A836CFJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ7_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.480e-41
Identity = 78/160 (48.75%), Postives = 101/160 (63.12%), Query Frame = 0
Query:    7 VFSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGG--HQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRKPMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSR 164
            + + P +RR  PDD FFE G++ RA   KMSV   L + E      ED ++ GG  H   + C    C+  F+S  R  +HY+TSHR+ CATCGR+F T RLLDLHLSE HDS+FKAMA ++ MY CLVEGC + F     R AH++ +H YP +FDF R
Sbjct:   40 LHTAPFKRRYQPDDPFFEAGDLARATACKMSVLHGLWDDE------EDAQSAGGRAHTGGFACRIGGCNATFTSTARFNEHYDTSHRHTCATCGRAFITPRLLDLHLSELHDSYFKAMAEKRHMYECLVEGCGKKFKDNNGRRAHMIAVHHYPRAFDFHR 193          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A2G9HTE4_9LAMI (Alpha-SNAP protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HTE4_9LAMI)

HSP 1 Score: 134 bits (337), Expect = 3.650e-33
Identity = 74/175 (42.29%), Postives = 98/175 (56.00%), Query Frame = 0
Query:   11 PVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSLARTTKRGSGKTKRTTSL 184
            P+RRR  PD  FF  GN++R LL+K     L EE +Q+  G  D+E  GG +    C    C     SL+  EDHY   H   C+ C R +PT RLL +H+SE HDSFF+A   R   MY CLVEGC     S   R  HL+  H++P SF+F ++  ART+K+   K +R  +L
Sbjct:   19 PIRRRFGPDAPFFAAGNIERELLAKQVALELTEEEKQQIQG--DVEYCGGSEVF--CPVVGCGAFLKSLEDFEDHYNARHMASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGFAMYECLVEGCDTKLKSYNSRRQHLIDKHKFPSSFEFFKK--ARTSKKQRQKVQRKQAL 187          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A124SHE8_CYNCS (Zinc finger, C2H2-like protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A124SHE8_CYNCS)

HSP 1 Score: 134 bits (337), Expect = 4.370e-33
Identity = 72/157 (45.86%), Postives = 89/157 (56.69%), Query Frame = 0
Query:   11 PVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRS 166
            PV RR  PDD FF  GN++R LL+K     L EE +Q+   LED      H+  + C    C     SL   EDHY   H   C+ C R +PT RLL +H+SEAHDSFF+A A R  PMY CLVEGC     S   RH HL+  H +P SF+F ++S
Sbjct:   23 PVLRRFGPDDPFFASGNIERELLAKQVALDLTEEEKQQLRNLEDE-----HREVF-CPIVGCVARLRSLAEFEDHYNARHTACCSVCSRVYPTSRLLSIHVSEAHDSFFQAKAARGYPMYECLVEGCGVKLKSYKSRHQHLMDKHNFPSSFEFFKKS 173          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A444YSN5_ARAHY (Uncharacterized protein n=2 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444YSN5_ARAHY)

HSP 1 Score: 135 bits (339), Expect = 1.100e-32
Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 0
Query:    8 FSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLED-METFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSLARTTKRGSGKTKRTTSLRK 186
            F  P+RRR +PD  FF  GN+QR LL+K     L EE EQ ED ++D  E F        C    C T  +S++  E+HY   H   C+ C R +PT RLL +HLSE HDSFF+A   R   +Y CLVEGC   F +   R  HLV  H++P SFDF ++S  R +K+   K++R  S++K
Sbjct:   90 FWKPLRRRFNPDSPFFASGNLQRELLAKQVALELTEENEQLEDCIQDGREVF--------CPIVGCGTRLTSIEDFENHYNARHTASCSVCSRVYPTSRLLSIHLSEVHDSFFQAKLARGYDVYECLVEGCGLKFKTYSSRQQHLVDKHKFPTSFDFFKKS--RPSKKQRLKSQRKQSVQK 260          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: M5WTR3_PRUPE (C2H2-type domain-containing protein n=9 Tax=Prunus TaxID=3754 RepID=M5WTR3_PRUPE)

HSP 1 Score: 131 bits (330), Expect = 3.930e-32
Identity = 75/178 (42.13%), Postives = 99/178 (55.62%), Query Frame = 0
Query:   11 PVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSLARTTKRGSGKTKRTTSLRKK 187
            P+RRR  P+  FF  GN++R LL+K     L E+   +   + D E  G       CT   C    SSL+  EDHY   H   C+ C R +PT RLL LHLSEAHDSFF+A   R  PMY CLVEGC   F +   R  HLV  H++P SF+F ++  A+ +K+   K +R  ++ KK
Sbjct:   18 PLRRRFGPESPFFASGNIERELLAKQLALDLTEDERHQLRNMVDEEGRGVF-----CTIVGCGARLSSLEDFEDHYNARHTASCSVCSRVYPTSRLLSLHLSEAHDSFFQAKVARGYPMYECLVEGCDLKFKNYKSRQQHLVDKHKFPTSFEFFKK--AQPSKKQRQKNQRKQAIPKK 188          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A2J6MB23_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6MB23_LACSA)

HSP 1 Score: 131 bits (330), Expect = 4.240e-32
Identity = 66/157 (42.04%), Postives = 87/157 (55.41%), Query Frame = 0
Query:   11 PVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRS 166
            PV RR  PDD FF  GN++R LL+K     L EE +Q      ++  F        C    C     +L   EDHY   H + C+ C R +PT RLL +H+SEAHDSFF+A A R  PMY CLVEGC     S   RH HL+  H++P +++F ++S
Sbjct:   22 PVLRRFGPDDPFFASGNIERELLAKQITLDLTEEEKQ------EIRNFEDKYREVLCPIVGCGATLKTLTEFEDHYNARHTSSCSVCSRVYPTSRLLSIHVSEAHDSFFQAKAARGYPMYECLVEGCGVKLKSYKSRHQHLMDKHKFPSTYEFLKKS 172          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A165WNA0_DAUCS (C2H2-type domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165WNA0_DAUCS)

HSP 1 Score: 131 bits (330), Expect = 4.460e-32
Identity = 72/167 (43.11%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    2 KEIKGVFSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGR-KPMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSL 167
            KEI   +  P RRR  PD  FF  GNV+R LL+K     + E+ +Q    +ED E  G       C    C    +SL+  EDHY+  H   C+ C R +PT RLL +H+SEAHDSFF+A   R   MY CLVEGC     S   R  HLV  H++P SF+F ++SL
Sbjct:    8 KEIGFKYWFPSRRRFFPDSPFFASGNVERELLAKQLALDITEDEKQELAYIEDREKRG-----VSCPIVGCRVHMNSLEDFEDHYKARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGHAMYECLVEGCDAKLKSYKSRQQHLVDKHKFPTSFEFFKKSL 169          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A6I9URD0_SESIN (zinc finger protein 511 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9URD0_SESIN)

HSP 1 Score: 131 bits (330), Expect = 4.810e-32
Identity = 76/185 (41.08%), Postives = 103/185 (55.68%), Query Frame = 0
Query:    4 IKGVFSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQR-EDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSLARTTKRGSGKTKRTTSLRK 186
            +K  +  P+RRR +PD  FF  G+++R LL+K     L EE +Q+  +G+ED     G    + C    C     SL+  EDHY   H   C+ C R +PT RLL +H+SEAHDSFF+A   R   MY CLVEGC     S   RH HLV  H++P SF+F ++  A+ +KR   K  R  +L K
Sbjct:   12 LKFPYWNPLRRRFAPDAPFFAAGSIERELLAKQVALDLTEEEKQQIREGVEDW----GSSEVF-CQIVGCGAYLKSLEDFEDHYNARHMASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCDAKLKSYKSRHQHLVDKHKFPPSFEFFKK--AKPSKRQRQKVLRKQALHK 189          
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Match: A0A2I0JVI8_PUNGR (zinc finger protein 511 n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JVI8_PUNGR)

HSP 1 Score: 130 bits (328), Expect = 8.020e-32
Identity = 74/189 (39.15%), Postives = 103/189 (54.50%), Query Frame = 0
Query:    2 KEIKGVFSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQREDGLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRSFPTHRLLDLHLSEAHDSFFKAMAGRK-PMYVCLVEGCKEAFWSTGKRHAHLVGIHRYPESFDFSRRSLARTTKRGSGKTKRTTSLRKKQT 189
            ++++  +   VRRR  PD  FF  GN++R LL+K     + EE   + + L D    G       C    C    +SL   EDHY T H   C+ C R +PT RLL +H+SEAHDSFF+A   R   MY CLVEGC   F +   RH HLV  H++P SF+F ++  A T+K+   K +R  +  K++T
Sbjct:    9 EQLRFPYWNSVRRRFDPDSPFFAPGNIERELLAKQIALDISEEERHQLEDLVDEPNRGVF-----CPIVGCGAQLTSLMNFEDHYRTRHTASCSVCSRVYPTSRLLGIHVSEAHDSFFQAKVARGYAMYECLVEGCGMKFKTYKDRHQHLVDKHKFPTSFEFLKK--AHTSKKRRQKIQRKQATHKQET 190          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig103.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Z1_ECTSI7.740e-6666.05C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarp... [more]
A0A836CFJ7_9STRA7.480e-4148.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2G9HTE4_9LAMI3.650e-3342.29Alpha-SNAP protein n=1 Tax=Handroanthus impetigino... [more]
A0A124SHE8_CYNCS4.370e-3345.86Zinc finger, C2H2-like protein n=1 Tax=Cynara card... [more]
A0A444YSN5_ARAHY1.100e-3243.09Uncharacterized protein n=2 Tax=Arachis hypogaea T... [more]
M5WTR3_PRUPE3.930e-3242.13C2H2-type domain-containing protein n=9 Tax=Prunus... [more]
A0A2J6MB23_LACSA4.240e-3242.04Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]
A0A165WNA0_DAUCS4.460e-3243.11C2H2-type domain-containing protein n=1 Tax=Daucus... [more]
A0A6I9URD0_SESIN4.810e-3241.08zinc finger protein 511 n=1 Tax=Sesamum indicum Ta... [more]
A0A2I0JVI8_PUNGR8.020e-3239.15zinc finger protein 511 n=2 Tax=Punica granatum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 59..155
e-value: 9.7E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..218
NoneNo IPR availablePANTHERPTHR21354:SF0ZINC FINGER PROTEIN 511coord: 7..216
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 65..90
e-value: 0.023
score: 23.9
coord: 92..115
e-value: 1.6
score: 17.8
coord: 129..154
e-value: 7.2
score: 14.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 67..90
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 94..115
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 131..154
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 65..95
score: 9.161507
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 92..115
score: 8.600363
IPR039258Zinc finger protein 511PANTHERPTHR21354UNCHARACTERIZEDcoord: 7..216
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 300..328
score: 11.591409
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 303..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig103contigA-nodosum_M_contig103:455722..470468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig103.50.1mRNA_A-nodosum_M_contig103.50.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig103 455520..470751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig103.50.1 ID=prot_A-nodosum_M_contig103.50.1|Name=mRNA_A-nodosum_M_contig103.50.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=417bp
MKEIKGVFSGPVRRRLSPDDEFFEEGNVQRALLSKMSVFALLEEREQRED
GLEDMETFGGHQTAYECTFHDCSTVFSSLKRLEDHYETSHRNRCATCGRS
FPTHRLLDLHLSEAHDSFFKAMAGRKPMYVCLVEGCKEAFWSTGKRHAHL
VGIHRYPESFDFSRRSLARTTKRGSGKTKRTTSLRKKQTRERRQQEQQRD
EQAAEAGATGSTKSVTAPAIDTGDEIGGGDVEAIASADLGEYRAAVSGEV
EGATAARVENGGRLAAGDGDMDVEYDAEVFAGSRAAAPRNQANGATGPRQ
RAPRKCKFWRTSGGCRAGRDCMFRHDAAGHRGAAVGRLNDTEQGAGAKLE
TAEGRASVDGRGDSNPVASEAGVIECGLDVAGVDGLVNGLRKLSIPTHLS
FGRTGRRGKLLGSVTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR039258ZNF511
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf