prot_A-nodosum_M_contig103.38.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig103.38.1
Unique Nameprot_A-nodosum_M_contig103.38.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length220
Homology
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 9.830e-78
Identity = 122/145 (84.14%), Postives = 136/145 (93.79%), Query Frame = 0
Query:   75 VMAISQAAVEEIENADEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAISGL 219
            +MA+S AA EEI N ++VP LKDPVAI+DFEALD+RVG IV+AELIPDP+H NKPSRKYLSLVVDLGNEKRRVVSAVR+IVDVEDAIGK+VL+AANVEEETILG PSRG+LLS SNFSK+PMPRTLRTVLLGGGGVPPGSA+SGL
Sbjct:    2 MMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.200e-57
Identity = 95/144 (65.97%), Postives = 117/144 (81.25%), Query Frame = 0
Query:   76 MAISQAAVEEIENADEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAISGL 219
            +A+S A  EE  ++ +VP L+  V+++ +EALD+RVG IV AE +PDP+H NKPSRKYLSLVV LGNE R ++S VR + DVE+AIGKSVL+ AN EEE ILGRPSRGRLL A+N+SK PMPRTLRTVLLGGG VPPGS ++GL
Sbjct:   16 VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 162 bits (410), Expect = 9.990e-47
Identity = 83/144 (57.64%), Postives = 114/144 (79.17%), Query Frame = 0
Query:   76 MAISQAAVEEIENAD--EVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAIS 217
            MA  + AV+E +N D  ++P +KD V+ +  ++LD+RVG I  A+LIPDPEH+ KPSRKYL L+V++G EKR +V+A R I DVE++IG+SVL+A NVE++T+LG  S GRLLSASN +++P+PRTLRTVL  GGG+PPGS +S
Sbjct:   61 MAFVKGAVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 101 bits (252), Expect = 6.340e-23
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 0
Query:   81 AAVEEIENADEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHD---NKP--SRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAISG 218
            A V E  +    P +K  V  S FE++DVRVG I  A+ + D E      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G  S G +L+  N+   PMPR+ + +L G G +PPGS + G
Sbjct:   77 AEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 99.4 bits (246), Expect = 4.520e-22
Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 0
Query:   81 AAVEEIENADEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHD---NKP--SRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAI 216
            A V E  +    P +K  V  S FE++DVRVG I  A+ + D E      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G  S G +L+  N+   PMPR+ + +L G G +PPGS +
Sbjct:   49 AEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQL 189          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A0A1G8X7N8_9EURY (Methionine--tRNA ligase n=1 Tax=Methanoculleus thermophilus TaxID=2200 RepID=A0A1G8X7N8_9EURY)

HSP 1 Score: 74.3 bits (181), Expect = 8.160e-12
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   75 VMAISQAAVEEIENADEVPTLKDP-VAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASN 190
            + A+     E +E A E    K P V+I +F  LD+RVG IV AE I       K S+K   L+VDLG+EKR+VVS +      E+ +GK V + AN+    I G  SRG +L+A +
Sbjct:  537 IAALEAILNERVEKAKEAAKPKTPTVSIDEFAKLDIRVGQIVSAEPI-------KGSKKLYKLIVDLGSEKRQVVSGIAQFYSPEELVGKDVAMIANLAPAKIFGVESRGMILAAGD 646          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 72.8 bits (177), Expect = 2.740e-11
Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 0
Query:   84 EEIENADEVPTLK-DPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTL 200
            + ++ A   P  K + ++I DF  +D+R+G I+ AE IP        S+K L L+VDLG EKR++VS +      ED +G+ V + AN+   TI G  SRG +L+A + +   +P T+
Sbjct:  545 KRVKEAGAPPAPKMEEISIEDFCRMDIRIGKILKAEPIPK-------SKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A0A1F8JXF2_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 TaxID=1797606 RepID=A0A1F8JXF2_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 3.730e-11
Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   87 ENADEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASN 190
            EN      LK+ +   DF  LD+RVG I+ AE +       + S K L + VD+G EKR++VS++      ED IGK V+I AN++   ++G  S+G +L+A N
Sbjct:  558 ENLKSFEKLKEEITYEDFSKLDLRVGKIISAEKV-------EKSNKLLKITVDIGFEKRQIVSSIAKTFKPEDLIGKKVIIVANLKTAKLMGIDSQGMILAAGN 654          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: A0A2H0VUE8_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 TaxID=1973936 RepID=A0A2H0VUE8_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 6.860e-11
Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = 0
Query:   84 EEIENADEVPT-----LKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAIS 217
            E+++   EV T     LKDP+    FE +D+RV  ++ A  +P        S+K L L+VD+G EKR +VS +    + E  +GK V+I AN+   TI+G  S+G +L+AS      +P+           + PGS++S
Sbjct:  556 EKLKEVKEVTTTTYQPLKDPITFETFEKIDLRVAQVLEAVKVPK-------SKKLLKLLVDVGFEKRTIVSGIALSYEPEQLVGKKVVIVANLAPATIMGIESQGMILAASLEKSLELPQIQN--------LAPGSSVS 679          
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Match: L0AB28_CALLD (Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase n=2 Tax=Caldisphaera lagunensis TaxID=200415 RepID=L0AB28_CALLD)

HSP 1 Score: 67.0 bits (162), Expect = 7.380e-11
Identity = 36/103 (34.95%), Postives = 66/103 (64.08%), Query Frame = 0
Query:   95 LKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSAS-NFSKKPM 196
            L++ +  S+F  +D+RVG ++ AEL+P+       SRK + L+VDLG E+R++++ ++     ED +GK V++ AN++ + + G  S+G +L+A     KKP+
Sbjct:    4 LEEKIDYSEFSKIDLRVGKVISAELVPN-------SRKLIKLIVDLGTEQRQILAGLQKWYKPEDFVGKFVVVVANLKSKIMGGLESQGMILAAPCGDDKKPV 99          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig103.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI9.830e-7884.14tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA1.200e-5765.97tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP9.990e-4757.64Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA6.340e-2343.36tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA4.520e-2243.26Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1G8X7N8_9EURY8.160e-1240.17Methionine--tRNA ligase n=1 Tax=Methanoculleus the... [more]
UPI001AE5ECDA2.740e-1136.44methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
A0A1F8JXF2_9BACT3.730e-1138.46Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
A0A2H0VUE8_9BACT6.860e-1133.81Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
L0AB28_CALLD7.380e-1134.95Protein containing C-terminal region/beta chain of... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 110..193
e-value: 6.0E-7
score: 29.5
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 103..217
score: 16.132702
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 96..216
e-value: 5.0E-19
score: 70.3
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 99..215
NoneNo IPR availablePANTHERPTHR11586TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBERcoord: 95..216
NoneNo IPR availablePANTHERPTHR11586:SF35METHIONYL-TRNA SYNTHETASE N-TERM HOMOLOG (METS-LIKE)coord: 95..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig103contigA-nodosum_M_contig103:399512..412521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig103.38.1mRNA_A-nodosum_M_contig103.38.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig103 398855..412658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig103.38.1 ID=prot_A-nodosum_M_contig103.38.1|Name=mRNA_A-nodosum_M_contig103.38.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=220bp
MKKISSGIAGVLSCTALFIGTALVTTPTTCHAFAAYHFPRRPFEAPVAAA
RQRPGLHGSNGSRGLRFRDRGGAPVMAISQAAVEEIENADEVPTLKDPVA
ISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSA
VRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTL
RTVLLGGGGVPPGSAISGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold