prot_A-nodosum_M_contig103.37.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig103.37.1
Unique Name	prot_A-nodosum_M_contig103.37.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	211

Homology

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI00053F8DEF (ATP-dependent DNA helicase PIF1-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8DEF)

HSP 1 Score: 119 bits (298), Expect = 6.420e-28
Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLPGDF-LPVSGDVKTDVCLDEA--SVFSPSG-------RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTIGDPDITVLY 202
            W EAPMT+RY  + V+R+L   MGN+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA L RSPLW  ++VL+   NMR       A  L  + +G+GDE       + LP +  +P   D   D  +D+   ++    G       R I+   N +   +N +++ERF   G    S D++ D D   LY
Sbjct:  126 WDEAPMTHRYQFEAVDRSLKDLMGNDLPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASLIRSPLWNHISVLQLRENMRSRHDNGFANFL--LSIGNGDEPTISDDMIKLPSNMVIPTVADTSIDGLIDQIFPNLNEHIGDGNFMVERAIITPLNENADRINDKVIERFLGEGRTYYSFDSVPD-DTRNLY 313

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI0009010F48 (uncharacterized protein LOC109135721 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0009010F48)

HSP 1 Score: 119 bits (298), Expect = 2.010e-27
Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLPGDF-LPVSGDVKTDVCLDEA--SVFSPSG-------RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTIGDPDITVLY 202
            W EAPMT+RY  + V+R+L   MGN+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA L RSPLW  ++VL+   NMR       A  L  + +G+GDE       + LP +  +P   D   D  +D+   ++    G       R I+   N +   +N +++ERF   G    S D++ D D   LY
Sbjct: 1164 WDEAPMTHRYQFEAVDRSLKDLMGNDLPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASLIRSPLWNHISVLQLRENMRSRHDNGFANFL--LSIGNGDEPTISDDMIKLPSNMVIPTVADTSIDGLIDQIFPNLNEHIGDGNFMVERAIITPLNENADRINDKVIERFLGEGRTYYSFDSVPD-DTRNLY 1351

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI000B8B39A8 (ATP-dependent DNA helicase PIF1-like n=2 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B39A8)

HSP 1 Score: 110 bits (276), Expect = 1.540e-24
Identity = 69/183 (37.70%), Postives = 98/183 (53.55%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLP-GDFLPVSGDVKTDVCLDEA--SVFSPSG-------RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTI 193
            W EAPMT+RY  + V+R+L   MGN+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA   RSP+W  + +L    NMR       A  L  + VG+G+E       + LP G  +P   D   +  +D+   S+    G       R I+   N     +N +++E+F   G    S D++
Sbjct:  369 WDEAPMTHRYQFEAVDRSLKDLMGNDLPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASFVRSPMWRHIRILHLRENMRSIDDNGFANFL--LSVGNGNEPTVSDQMIRLPTGMIIPTVADSSIEALIDQVFPSLSEHVGDGNFIVERAIITPLNEDADRINNKVVEKFLGEGKTYYSFDSV 548

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI00053F4E4A (uncharacterized protein LOC104883934 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F4E4A)

HSP 1 Score: 110 bits (276), Expect = 1.760e-24
Identity = 70/183 (38.25%), Postives = 101/183 (55.19%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLPGDF-LPVSGDVKTDVCLDEA----SVFSPSG-----RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTI 193
            W EAPMT+RY  + V+R+L   M N+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA   +SP+W  V++L    NMR     A A  L  + +G+GDE       + LP    +P + DV  ++ +D+     S     G     R I+   N     +N +++E+F   G    SID++
Sbjct: 1194 WDEAPMTHRYHFEAVDRSLKDLMENDLPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASFVKSPIWRHVSILHLRENMRTRDDSAFATRL--LSIGNGDEPTVSDHMIKLPNHMVIPSTDDVSIEMLIDQVFPNLSQHVGEGKYMVERAIITPLNEDADKINDKVVEKFLGEGKTYYSIDSV 1373

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI000B8B69EB (uncharacterized protein LOC110780336 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B69EB)

HSP 1 Score: 109 bits (273), Expect = 4.320e-24
Identity = 69/183 (37.70%), Postives = 98/183 (53.55%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLP-GDFLPVSGDVKTDVCLDEA--SVFSPSG-------RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTI 193
            W EAPMT+RY  + V+R+L   MGN+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA   RSP+W  + +LR   NMR       A  L  + VG+G+E       + LP    +P   D   +  +D+   S+    G       R I+   N     +N +++E+F   G    S D++
Sbjct:  640 WDEAPMTHRYQFEAVDRSLKDLMGNDLPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASFFRSPMWRHIRILRLRENMRSIDDNGFANFL--LSVGNGNEPTVSDQMIRLPTAMIIPTVADSSIEALIDQIFPSLSEHVGDGNFIVERAIITPLNEDADRINNKVVEKFLGEGKTYYSFDSV 819

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI000B8AD2F7 (uncharacterized protein LOC110799600 n=5 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AD2F7)

HSP 1 Score: 109 bits (273), Expect = 4.520e-24
Identity = 69/183 (37.70%), Postives = 98/183 (53.55%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLP-GDFLPVSGDVKTDVCLDEA--SVFSPSG-------RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTI 193
            W EAPMT+RY  + V+R+L   MGN+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA   RSP+W  + +LR   NMR       A  L  + VG+G+E       + LP    +P   D   +  +D+   S+    G       R I+   N     +N +++E+F   G    S D++
Sbjct: 1226 WDEAPMTHRYQFEAVDRSLKDLMGNDLPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASFVRSPMWRHIRILRLRENMRSIDDNGFANFL--LSVGNGNEPTVSDQMIRLPTAMIMPTVADSTIEALIDQIFPSLSEHVGDGNFIVERAIITPLNEDADRINNKVVEKFLGEGKTYYSFDSV 1405

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI00053FEE25 (uncharacterized protein LOC104903349 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FEE25)

HSP 1 Score: 108 bits (271), Expect = 7.450e-24
Identity = 69/183 (37.70%), Postives = 102/183 (55.74%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLPGDF-LPVSGDVKTDVCLDE--ASVFSPSG-------RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTI 193
            W EAPMT+RY  + V+R+L   M N LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA   +SP+W  V++L    NMR     A A  L  + +G+GDE       + LP    +P + DV  ++ +D+  +++    G       R I+   N     +N +++E+F   G    SID++
Sbjct:  478 WDEAPMTHRYHFEAVDRSLKYLMENELPFGG-KIIVFGGDFRQVLPVVRNGTRAQMIDASFVKSPIWRHVSILHLRENMRTRDDSAFATRL--LSIGNGDEPTVSDHMIKLPKHMVIPSTDDVSIEMLIDQDFSNLSQHVGEGKYMVERAIITPLNEDADKINDKVVEKFLGEGKTYYSIDSV 657

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI000D62A1C5 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62A1C5)

HSP 1 Score: 106 bits (264), Expect = 2.690e-23
Identity = 69/194 (35.57%), Postives = 100/194 (51.55%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMR----PALAGLLWQMRVGDGDEAQHGYGEVNLPGDFLPVSGD-----------VKTDVCLDEASVFSPSGRIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTIGDPDITVLYP 203
            W EA M  R + + ++RT+    G  LP+GG KI+VMGGDF+QV+PVVRRGTR Q+ D+ L+ SPLW  +  +R  +NMR    P  +  L  +RVGDGDE       + +P D      D           +   + ++EA       R I+  +N +V  +N ++++RF        S D   D DI   YP
Sbjct:   89 WDEASMAKRQTVEALDRTMQDITGVTLPFGG-KIMVMGGDFRQVLPVVRRGTRAQIVDSSLRMSPLWSSIKKIRLTLNMRARSDPWFSDFL--LRVGDGDEEMMEESFIRIPDDMAIAYADKDKSKHDLIDAIFPSLQINEADSNYIVSRAILSTKNENVDEINDQLIDRFCGDEKVYYSFDEAED-DINNFYP 278

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: UPI00053FF0F2 (uncharacterized protein LOC104901240 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FF0F2)

HSP 1 Score: 106 bits (264), Expect = 5.840e-23
Identity = 68/183 (37.16%), Postives = 98/183 (53.55%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRP----ALAGLLWQMRVGDGDEAQHGYGEVNLPGDF-LPVSGDVKTDVCLDEA----SVFSPSG-----RIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTI 193
            W EAPMT+RY  + V+R+L   M N+LP+GG KIIV GGDF+QV+PVVR GTR Q+ DA   +SP+W  V +L    NMR       A  L+   +G+GDE       + LP    +P   DV  ++ +D+     S     G     + I+   N     +N +++E+F   G    SID++
Sbjct:  286 WDEAPMTHRYQFEAVDRSLRDLMENDLPFGG-KIIVFGGDFRQVLPVVRNGTRTQMIDASFVKSPIWRHVNILHLRENMRSRDDNTFATRLFS--IGNGDEPTVSDQMIKLPNHMVIPSIDDVSIEMLIDQVFPNLSQHVGEGNYMVDKAIITPLNEDADKINDKVVEKFLGEGKTYYSIDSV 465

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BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Match: C6JRY2_SORBI (ATP-dependent DNA helicase n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRY2_SORBI)

HSP 1 Score: 105 bits (262), Expect = 7.880e-23
Identity = 75/186 (40.32%), Postives = 99/186 (53.23%), Query Frame = 0

Query:   25 WSEAPMTYRYSHKVVERTLAGFMGNNLPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFLINMRPALAGLLWQ--MRVGDGDEAQHGYGEVNLPGDFLPVSGDVKTDVCLDEA--SVFSP-----------SGRIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTIGD 195
            W E  MT R   + ++R+L   M  +LP+GG K++V GGDF+QV+PVV RGTR QV DA L+RS LW+ +  +R   NMR        Q  +R+G+G E   G   V LP D   V G   TDV ++    SVF             SGR I+  +N HV  LNA ++ERF        S DT+ D
Sbjct:  320 WDEVAMTKRQCVETLDRSLQDIMECSLPFGG-KVMVFGGDFRQVLPVVPRGTRAQVTDATLQRSYLWDKIKKIRLSQNMRAQSDPWFSQYLLRIGNGTEETIGDDYVRLPVDI--VIGYTNTDVAVNTLIFSVFPSLGEHATSAAYMSGRAILSTKNEHVDRLNAMMIERFPSEEKVYHSFDTVVD 502

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig103.37.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI00053F8DEF	6.420e-28	39.58	ATP-dependent DNA helicase PIF1-like n=1 Tax=Beta ...	[more]
UPI0009010F48	2.010e-27	39.58	uncharacterized protein LOC109135721 n=2 Tax=Beta ...	[more]
UPI000B8B39A8	1.540e-24	37.70	ATP-dependent DNA helicase PIF1-like n=2 Tax=Spina...	[more]
UPI00053F4E4A	1.760e-24	38.25	uncharacterized protein LOC104883934 n=1 Tax=Beta ...	[more]
UPI000B8B69EB	4.320e-24	37.70	uncharacterized protein LOC110780336 n=1 Tax=Spina...	[more]
UPI000B8AD2F7	4.520e-24	37.70	uncharacterized protein LOC110799600 n=5 Tax=Spina...	[more]
UPI00053FEE25	7.450e-24	37.70	uncharacterized protein LOC104903349 n=1 Tax=Beta ...	[more]
UPI000D62A1C5	2.690e-23	35.57	ATP-dependent DNA helicase PIF1-like n=1 Tax=Cynar...	[more]
UPI00053FF0F2	5.840e-23	37.16	uncharacterized protein LOC104901240 n=1 Tax=Beta ...	[more]
C6JRY2_SORBI	7.880e-23	40.32	ATP-dependent DNA helicase n=1 Tax=Sorghum bicolor...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010285	DNA helicase Pif1-like	PFAM	PF05970	PIF1	coord: 24..193 e-value: 7.1E-18 score: 64.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 52..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig103	contig	A-nodosum_M_contig103:392160..392812 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig103.37.1	mRNA_A-nodosum_M_contig103.37.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig103 391982..393134 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig103.37.1 ID=prot_A-nodosum_M_contig103.37.1|Name=mRNA_A-nodosum_M_contig103.37.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=211bp
MRRASWTNVAILPSSSTVWTPPTCWSEAPMTYRYSHKVVERTLAGFMGNN
LPWGGNKIIVMGGDFQQVIPVVRRGTRGQVFDAYLKRSPLWEMVTVLRFL
INMRPALAGLLWQMRVGDGDEAQHGYGEVNLPGDFLPVSGDVKTDVCLDE
ASVFSPSGRIIVVARNAHVRLLNAEILERFSWPGTPSVSIDTIGDPDITV
LYPPPPAQIS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010285	DNA_helicase_pif1-like
IPR027417	P-loop_NTPase