prot_A-nodosum_M_contig103.35.7 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig103.35.7
Unique Nameprot_A-nodosum_M_contig103.35.7
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1802
Homology
BLAST of mRNA_A-nodosum_M_contig103.35.7 vs. uniprot
Match: A0A6H5KMP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP5_9PHAE)

HSP 1 Score: 1103 bits (2854), Expect = 0.000e+0
Identity = 758/1745 (43.44%), Postives = 955/1745 (54.73%), Query Frame = 0
Query:  145 GGYAKREILLAQMKMPKTRRQGLVAMWESDLRLRAHEYSALLTAACQLGWTAMASTIMEEMVEDGFPLDAKTYGQAIKAACRADNVRLALLLIMDQYVRWQEGAFAEQKEAS--ATSGSGVTVPRSRG----------AMRMSDIKQHFPKVLAVTMRTGDMEGSLETLQYMSAMGVEATPGICQILLSTAFKAGGDHVRRVPAILRAMGEMNVTPDTSLLEVLKMLYEADSPESALDLLLEVSR-GDGSTGLTKCW---WPVSCGPEAFAFLMKHSQKMGRLDVVSMAIHALLTDLPRALYENASPAVLVVDGGVIISNK----GAQGSSKIISEVALVKEDSGGINGNGQPVTS-GDGRANKIGVSDGTEASPTGKSEKTGVDGLRFRDLEKIQEARK-----------------VMGKGRIELQPRVVYAYTMNNELVTLREQSGLDAIAHSRAIPLDQKAAAIEFYGFNFLFDFPGSPARSPPLDFDSFETLARRRSPM-STQASTVLDSMLAVLAKSSS---GHTAAALLDQWRAITLGGVLA--EGGGVETEAGTGDDDSAEDARTLARYGKPTEVSYSLTMAALVRSGQWGRARSLLEVMKADGVRPSTECFSTLLTLLLERV-----EPTSTTRAPTAPGGSSIDAHNSASFPYDSYLWAEPTYDWEEVVSLVGDARNAEGV--TVSPEMYLTALSVLPPIAGRPKPTGLGVASSAPPPP----ARIFLEKAERLLDWAREDGVAMTATLLYPVVLLAHVARDASKVLENFERMLEIDVPHN--SSLPLYADAYKMALDACAFGKDPERALSYVHGMRSRSNLGPRAPHYEKAVSAMAAAGRFRDAYQLLAAAVEAGSASVEVYDAAIKAAALEGNSGQAETILRVMVDMGVTPGSETIRRGPGQVILTYGACGDVDGLCSIMDRATNRAFPGSVLNALVYETLLRVLIPLEAWQEAEAFVKEAERLLPGSLTYRTYGYLMVAYAVESQWGAAIDLATGIGRWPES-STDPGGRAHPPELRETACAVALEWLLAPRMDAEDGASVSGVDGEKEGDIGGEGAGALGEGLAE---RALRYRCCGRELFVRLLAAGGPLNSVRVIEAALGALGGAGLEEEEGADSRPSSAAAQGLDSF--PTIQLWRDVEDGFSGKEATSTPGR-CPGFSDDWLVSSLPKDDAEREISAQALHVSTVLEVLLRAYATCDQSAVSGFHSPAGVGLLQQGISAACAADDPDLAERLFEAWLRRANIDQPWNTRLRTELRVSLSEVLAGFFAEGGGKQGVFRGLALIGRCRDTGLSPDPRDLLAAMQACNAAGLFSLALKLFDELS------------------------------DATDPDAARSESAGVPGT--------PDSETQIESSARDKE-----GRNREGTAAGRQESGKGGESLAVKEEGDAGEDVM-GVLAAGMAGERGPSMYMEGLRQDIPDGELLPAAAATVALESCFLGGNRDRTMSIVWQ--LIRRRHPLTESCRNRAIVALTEGGKPDMALSMARGMEIDGHYTDRATLEFVEKFQERAFEAAAAAAEKLKTADATGAAAVDDDIFNPSDKLLEKDRQCPERGSEAIDLVVDEEEQELDGAWVGDGVSDVSNNAVAAEIAAGHGKGGRPDGDGQGKTSGLVGVVEEAQVAEEEYDTL-ECEATEGMGAAATDIAVSGKIEEDGRPPEFVLRFLPLLSEALRNRLRPEEDAANVGGVDD 1778
            G +AK+E LL QMK PKTRR+ L+AMWESD+ L+  EY ALLTA+CQLGW AMAS IMEEM+  G P+   TY  AIKAAC+A+  RLALLLI+DQ+   ++G     KEA   A  G G                   +  S  + +  KVL VT RTG++EGSL+ L+YM AMG+ A PG+C +LL+TA KAG  H  RVP ILRAMGE  + PD  LL+ L+ML +A SPE ALDLL+EV+  G    G+ K W     VS   EA++F++K ++K GR D+V  +IHA+L DLP++LY N    V  V      +      G +G +   +  A     +      G P T  G G  +   +++                     DL+     R                  V+G G        V     +  L   R   G +        P                    G   +   L         R  +     Q+ ++L+ +LA LA SSS   GHTAA +LD+WR+ITLGG  A  E GGV           AE     ARY +PT+ SY  TM+ALV+SGQWGRARSL+EVMKADG+ P   C+S LLTLL  R+     +P        +   SS+   + A+F     LW+EPTY+W+EVVSL+GDAR+ E     ++ +MY TAL VL  I+ RP    LGV   A        A++FL++AE LL+WA + G  MT  +L+P++ L+H ARDA KV + FE +LE D P    +    +A+AY MA+ AC FG + ERAL+YV  M S S L P A  YE A+ AM +A RFRDAYQLLA AVE G+ +V VYD A++A ALEGN  QAET++RVM+D G  PGS  +     Q++L YG  GDV+G+ S+M RA N  F G V+NALVYE++L+ L PLEAWQ+AE FVKE E +LPGSLTYRTYGYLMVAYAVE QWGA ++LA G GRWPE  S  P GR HPPELRET CAVAL+WLL   +   D  +  GV         G G+G +GE  AE   RAL YR CGRELF RLLA+G PL SVRVI+AALG +G      E G  S  S   ++    F   T+  W D E   S   +TSTP +     S DWL+SSLP+++AEREI+AQALHV TV+EV LR Y+TC+Q   +G HSP  VGLLQQ ISAAC  DDPDLA+RL  AWL RA++ Q    RLR+ LR+SLSEVLA FFAEG G++GV+RGL+LIG+CRD GL P P D L AM+ACN AGL++ AL+LFD+L                               +  D   + +ES   PG+        P S  Q  S  +          N  G     Q  G   +  +   +G  G+D   G    G  GE   +M  E L  DIPDGELLPAAAAT+ALESCFLGG RD+ M IVWQ  LIRRRHPLTE+CRNRAIVALT  G PDMAL MARGME D HY DRAT+EFVE+F++ AF+AA                    + ++ + K  E                                      N    EIAA             G++              E   +     A+    A          +    RP E VLRFLPLLSEALR++LRP ED      VDD
Sbjct:  155 GDFAKKEDLLHQMKWPKTRRKALIAMWESDMVLKREEYFALLTASCQLGWAAMASMIMEEMLASGVPVTTATYDAAIKAACKANKDRLALLLIVDQWQAEKQG----DKEALPLADGGQGAKAATXXXXXXXXXXXXKVLSNSYFRTNLSKVLQVTSRTGNVEGSLDVLKYMGAMGISANPGVCHLLLATACKAGRGHSARVPGILRAMGECGLRPDMGLLDALEMLLDAGSPEVALDLLVEVANIGREKKGIGKFWRFDTNVSAA-EAYSFILKWAEKAGRPDIVGSSIHAILRDLPQSLYYNRGSEVEKVSAATATAGPVPATGGKGDADTPAAGAFSCATAASDVVEGLPPTGFGAGDDDHDPLTNXXXXXXXXXXXXXXXXXXXALDLDADSVKRSSXXXXXXXVXXXXXXXXVLGSGSASKLSSAV-----SGALTGARGGKGTEEGRDGEEGPGGXXXXXXXXXXXXXXXKKKGKNKQWTRLGQKELNRQRRNEAIYRQKQSVSILNHILADLADSSSFTSGHTAAEVLDRWRSITLGGAGAGGEAGGV-----------AE----TARYSRPTQASYMFTMSALVQSGQWGRARSLVEVMKADGMPPKVGCYSHLLTLLHTRLASRLPDPDKNVHVEESLSMSSLSPVDQAAF-----LWSEPTYEWDEVVSLLGDARSTERAKYAITEDMYHTALDVLQMISERPVDVSLGVVGGAATXXXXXXAKVFLDRAECLLEWALDAGTEMTVEILFPLLKLSHTARDAEKVFKYFEALLETDTPRQGWAYAATFAEAYDMAIHACEFGGESERALAYVRTMGSASGLKPAAKQYEAAIKAMVSARRFRDAYQLLAEAVENGAETVSVYDEALRACALEGNPAQAETLVRVMLDTGCDPGSNAM----SQLLLAYGNAGDVEGIQSVMARAGNEVFTGGVMNALVYESVLKTLAPLEAWQDAEMFVKEGEMVLPGSLTYRTYGYLMVAYAVEKQWGAVVELALGTGRWPERISGGPEGRFHPPELRETTCAVALKWLLTQGVRGCDSVARGGV---------GVGSGEVGEQQAEAVERALEYRKCGRELFTRLLASGAPLRSVRVIKAALGGIGA-----EPGQSSSDSPEGSEDATIFWKQTMPFWGDPEKPPSST-STSTPAKDWKPLSSDWLLSSLPEEEAEREIAAQALHVCTVVEVFLRLYSTCEQPGANGLHSPMAVGLLQQAISAACLVDDPDLADRLLMAWLERAHVTQLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGQCRDAGLLPYPFDFLGAMRACNTAGLYATALRLFDQLMAPASGDPSPAMEYXXXXXXXXXXXXXXXXXNGADSSLSAAESEPDPGSDAVMGGSLPASPEQSASGEQXXXXXXXXSANNSGRQGKPQPEGTPTDDGSSNRKGCEGDDEREGQAGTGETGEGSNTMRFENLN-DIPDGELLPAAAATIALESCFLGGRRDQAMEIVWQASLIRRRHPLTEACRNRAIVALTSAGHPDMALDMARGMEQDRHYADRATVEFVERFEKWAFDAA--------------------ESYDQAHKETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXEGNEEGREIAA------------VGESDAXXXXXXXXXXXXEMVSSQPSLSASSSFTARDRXXXXXXXVGSSDRPEELVLRFLPLLSEALRSKLRPGEDGEKTPQVDD 1814          
BLAST of mRNA_A-nodosum_M_contig103.35.7 vs. uniprot
Match: D7G8W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W2_ECTSI)

HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0
Identity = 718/1774 (40.47%), Postives = 912/1774 (51.41%), Query Frame = 0
Query:  142 RDHGGYAKREILLAQMKMPKTRRQGLVAMWESDLRLRAHEYSALLTAACQLGWTAMASTIMEEMVEDGFPLDAKTYGQAIKAACRADNVRLALLLIMDQYVRWQEGAFAEQKEASATSGSGVTVPRSRG---------------AMRMSDIKQHFPKVLAVTMRTGDMEGSLETLQYMSAMGVEATPGICQILLSTAFKAGGDHVRRVPAILRAMGEMNVTPDTSLLEVLKMLYEADSPESALDLLLEVSR-GDGSTGLTKCW---WPVSCGPEAFAFLMKHSQKMGRLDVVSMAIHALLTDLPRALYEN------------ASPAVLVVDGGVIISNKGAQGSSKIISEVALVKEDSGGINGNGQPVTSGDGRANKIGVSDGTEASPTGKSEKTGVDGLRFR---------------------------------------------------------DLEKIQEARK-----------------VMGKGRI-ELQPRVVYAYTMNNELVTLREQSGLDAIAHSRAIPLDQKAAAIEFYGFNFLFDFPGSPARSPPLDFDSF---ETLARRRSPMSTQASTVLDSMLAVLAKSSS---GHTAAALLDQWRAITLGGVLA--EGGGVETEAGTGDDDSAEDARTLARYGKPTEVSYSLTMAALVRSGQWGRARSLLEVMKADGVRPSTECFSTLLTLLLERV-----EPTSTTRAPTAPGGSSIDAHNSASFPYDSYLWAEPTYDWEEVVSLVGDARNAEGV--TVSPEMYLTALSVLPPIAGRPKPTGLGVASSAPPPP----ARIFLEKAERLLDWAREDGVAMTATLLYPVVLLAHVARDASKVLENFERMLEIDVPHN--SSLPLYADAYKMALDACAFGKDPERALSYVHGMRSRSNLGPRAPHYEKAVSAMAAAGRFRDAYQLLAAAVEAGSASVEVYDAAIKAAALEGNSGQAETILRVMVDMGVTPGSETIRRGPGQVILTYGACGDVDGLCSIMDRATNRAFPGSVLNALVYETLLRVLIPLEAWQEAEAFVKEAERLLPGSLTYRTYGYLMVAYAVESQWGAAIDLATGIGRWPES-STDPGGRAHPPELRETACAVALEWLLAPRMDAEDGASVSGVDGEKEGDIGGEGAGALGEGLAE---RALRYRCCGRELFVRLLAAGGPLNSVRVIEAALGALGGAGLEEEEGADSRPSSAAAQGLDSF--PTIQLWRDVEDGFSGKEATSTPGRCPGFSDDWLVSSLPKDDAEREISAQALHVSTVLEVLLRAYATCDQSAVSGFHSPAGVGLLQQGISAACAADDPDLAERLFEAWLRRANIDQPWNTRLRTELRVSLSEVLAGFFAEGGGKQGVFRGLALIGRCRDTGLSPDPRDLLAAMQACNAAGLFSLALKLFDELSDATDPDAARSESAGVPGTPDSETQIESSARDKEGRNREGTAAGRQESGKGGESLAVKEEGDAGEDVMGVLAAGMAGERGPSMYMEGLRQDIPDGELLPAAAATVALESCFLGGNRDRTMSIVWQLIRRRHPLTESCRNRAIVALTEGGKPDMALSMARGMEIDGHYTDRATLEFVEKFQERAFEAAAAAAEKLKTADATGAAAVDDDIFNPSDKLLEKDRQCPERGSEAIDLVVDEEEQELDGAWVGDGVSDVSNNAVAAEIAAGHGKGGRPDGDGQGKTSGLVGVVEEAQVAEEEYDTLECEATEGMGAAATDIAVSGKIEEDGRPPEFVLRFLPLLSEALRNRLRPEEDAANVGGVDDRRGE 1782
            R +G +AK+E LL QMK PKTRR+ L+AMWESD+ L+  EY ALLTA+CQLGW AMAS IMEEM+  G P+   TY  AIKAAC+A+  RLALLLI+DQY RWQ     + KEA   +G+G     +                  +  S  + +  KVL VT RTGD+EGSL+ L+YM AMG+ A PG+C +LL+TA KAG  H  RVP ILRAMG+  + PD +LL+ L+ML +A SPE ALDLL+EV+  G    G+ K W     VS   EA+ F++K ++K GR D+V  +IHA+L DLP++LY N            A+ A +   GG   ++  A G++   +  + V E   G+   G  V++GD   + +                                                                                  DL+     R                  V+G G   +L   V  A T         E SG +                                AR    + +     E + R++     Q+ ++L+ +LA LA SSS   GHTAA +LD+WR+ITLGG  A  E GGV   A TG            RY +PT+ SY  TM ALV+SGQWGRAR L+EVM ADG+ P   C+S LLTL+  R+     +P        +   SS+   + A+F     LW+EPTY+W+EVVSL+GDAR+ E     ++  MY TAL VL  I+ RP    LGV   A        A++FL++AE LL+WA + G  MT  +L+P++ L+H ARDA KV + FE +LE D P    +    +A+AY MA+ AC FG + ERAL+YV  M S S L P A  YE A+ AM +A RFRDAYQLLA AVE G+ +V VYD A++A ALEGN  Q                              YG  GDV+G+ S+M RA N  F G V+NALVYE++L+ L PLE WQ+AE FVKE E +LPGSLTYRTYGYLMVAYAVE QWGA ++LA G GRWPE  S  P GR HPPELRET CAVAL+WLL           VSG D    G +G  G+G +GE  AE   RAL YR CGRELF RLLA+G PL SVRVI+AALG +G      E G  S  S   ++    F   T+  W D E   S    +         S DWL+SSLP+++AERE++AQALHV TV+EV LR Y+TC+Q   +G HSP  VGLLQQ ISAAC  DDPDLA+RL  AWL RA++ Q    RLR+ LR+SLSEVLA FFAEG G++GV+RGL+LIGRCRD GL P P D L AM+ACN AGL++ AL+LFD+L+                  PDS                                                      G+  P++            E   AAAAT+ALESCFLGG RD+ M IVWQLIRRRHPLTE+CRNRAIVALT  G PDMAL MARGME D HY DRAT+EFVE+F++ AF+AA                    + ++ + +  E++                             G  D    A   E  A                          ++   +       +                +    RP E VLRFLPLLSEALR++LRPEED      VD    E
Sbjct:   26 RKNGDFAKKEDLLHQMKWPKTRRKALIAMWESDMVLKREEYFALLTASCQLGWAAMASMIMEEMLASGVPVTTATYDAAIKAACKANKDRLALLLIVDQYARWQAEKQGD-KEALPAAGTGQGSKATSAXXXXXXXXXXXXXXKVLSKSYFRTNLSKVLQVTSRTGDVEGSLDVLKYMGAMGIPANPGVCHLLLATACKAGRGHSARVPGILRAMGDCGLRPDMALLDALEMLLDAGSPEVALDLLVEVADIGREKKGIGKFWRFDTNVSAA-EAYLFVLKWAEKAGRPDIVGSSIHAILRDLPQSLYYNRGSEGEEVSAATAAAAPVSATGGKGDADTPAAGTASSATAASDVVE---GLPPTG--VSAGDDDPDPLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDLDAGSVTRSXXXXXXXXXXXXXXXXXVLGSGSASKLSSAVSGALTGARGGKGTEESSGGEQGQXGXXXXXXXXXXXXXXXXXXXXXGKNKQWARLGQKELNRQRRNEAIYRQK-----QSVSILNHILADLADSSSFTSGHTAAEVLDRWRSITLGGAGAGGEAGGV---AETG------------RYSRPTQASYMFTMWALVQSGQWGRARFLVEVMTADGIPPKVGCYSHLLTLMHTRLASRLPDPDKDVHVEESLSMSSLSPVDQAAF-----LWSEPTYEWDEVVSLLGDARSTERAKYAITEGMYHTALDVLQMISERPVDVSLGVVGGAATXXXXXXAKVFLDRAECLLEWALDAGTEMTVEILFPLLKLSHTARDAEKVFKYFEALLETDTPRQGWAYATTFAEAYDMAIHACEFGGESERALAYVRTMGSASGLKPAAKQYEAAIKAMVSARRFRDAYQLLAEAVENGAETVSVYDEALRACALEGNPSQP-----------------------------YGNAGDVEGIQSVMARAGNEVFTGGVMNALVYESVLKTLAPLEVWQDAEMFVKEGEMVLPGSLTYRTYGYLMVAYAVEKQWGAVVELALGTGRWPERISGGPEGRFHPPELRETTCAVALKWLLTQ--------GVSGCDSVAHGGVG-VGSGEVGEQQAEAVERALEYRKCGRELFTRLLASGAPLRSVRVIKAALGGIGA-----EPGPSSSDSPEGSEDAPIFWKQTMPFWGDPEKPSSSTSTSPLAKDWKPLSSDWLLSSLPEEEAEREVAAQALHVCTVVEVFLRLYSTCEQPGANGLHSPMAVGLLQQAISAACLVDDPDLADRLLIAWLERAHVTQLSQARLRSALRISLSEVLAAFFAEGQGEEGVYRGLSLIGRCRDAGLLPYPFDFLGAMRACNTAGLYATALRLFDQLT-----------------APDS------------------------------------------------------GDPSPAI------------EYPEAAAATIALESCFLGGRRDQAMEIVWQLIRRRHPLTEACRNRAIVALTSAGHPDMALDMARGMEQDRHYADRATVEFVERFEKWAFDAA--------------------ESYDQAQE--EREEXXXXXXXXXXXXXXXXXXXWXXXXXXXXGHEDERETAAVGESDA--------------XXXXXXXXXXXXELVSSQPSLSASSSFTARDRHGXXXXXXXXVSSSDRPAELVLRFLPLLSEALRSKLRPEEDGEKTAQVDSAEAE 1605          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig103.35.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMP5_9PHAE0.000e+043.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8W2_ECTSI0.000e+040.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1701..1721
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1681..1700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1765..1785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1443..1460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1422..1480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1765..1801
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 613..1589
coord: 170..402
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1308..1646
e-value: 2.3E-7
score: 32.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 599..737
e-value: 7.5E-9
score: 37.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 825..997
e-value: 5.8E-15
score: 57.5
coord: 153..274
e-value: 8.1E-8
score: 34.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 182..210
e-value: 0.092
score: 13.0
coord: 682..712
e-value: 0.12
score: 12.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 680..714
score: 10.566751

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig103contigA-nodosum_M_contig103:360792..389097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig103.35.7mRNA_A-nodosum_M_contig103.35.7Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig103 360608..389196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig103.35.7 ID=prot_A-nodosum_M_contig103.35.7|Name=mRNA_A-nodosum_M_contig103.35.7|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1802bp
MTAPSACSSRRRSLRRHRRRLEKLATLALYTLGMHLGGAHGFDYGLHQLP
RSSRARADGASRRGCRRAPWLDPLERQARATGERYVVGPNGFGTEVVEST
SAGDSRKRGRSGRGGHSEGGKRRGRSASDRQPQQQQQQHRQRDHGGYAKR
EILLAQMKMPKTRRQGLVAMWESDLRLRAHEYSALLTAACQLGWTAMAST
IMEEMVEDGFPLDAKTYGQAIKAACRADNVRLALLLIMDQYVRWQEGAFA
EQKEASATSGSGVTVPRSRGAMRMSDIKQHFPKVLAVTMRTGDMEGSLET
LQYMSAMGVEATPGICQILLSTAFKAGGDHVRRVPAILRAMGEMNVTPDT
SLLEVLKMLYEADSPESALDLLLEVSRGDGSTGLTKCWWPVSCGPEAFAF
LMKHSQKMGRLDVVSMAIHALLTDLPRALYENASPAVLVVDGGVIISNKG
AQGSSKIISEVALVKEDSGGINGNGQPVTSGDGRANKIGVSDGTEASPTG
KSEKTGVDGLRFRDLEKIQEARKVMGKGRIELQPRVVYAYTMNNELVTLR
EQSGLDAIAHSRAIPLDQKAAAIEFYGFNFLFDFPGSPARSPPLDFDSFE
TLARRRSPMSTQASTVLDSMLAVLAKSSSGHTAAALLDQWRAITLGGVLA
EGGGVETEAGTGDDDSAEDARTLARYGKPTEVSYSLTMAALVRSGQWGRA
RSLLEVMKADGVRPSTECFSTLLTLLLERVEPTSTTRAPTAPGGSSIDAH
NSASFPYDSYLWAEPTYDWEEVVSLVGDARNAEGVTVSPEMYLTALSVLP
PIAGRPKPTGLGVASSAPPPPARIFLEKAERLLDWAREDGVAMTATLLYP
VVLLAHVARDASKVLENFERMLEIDVPHNSSLPLYADAYKMALDACAFGK
DPERALSYVHGMRSRSNLGPRAPHYEKAVSAMAAAGRFRDAYQLLAAAVE
AGSASVEVYDAAIKAAALEGNSGQAETILRVMVDMGVTPGSETIRRGPGQ
VILTYGACGDVDGLCSIMDRATNRAFPGSVLNALVYETLLRVLIPLEAWQ
EAEAFVKEAERLLPGSLTYRTYGYLMVAYAVESQWGAAIDLATGIGRWPE
SSTDPGGRAHPPELRETACAVALEWLLAPRMDAEDGASVSGVDGEKEGDI
GGEGAGALGEGLAERALRYRCCGRELFVRLLAAGGPLNSVRVIEAALGAL
GGAGLEEEEGADSRPSSAAAQGLDSFPTIQLWRDVEDGFSGKEATSTPGR
CPGFSDDWLVSSLPKDDAEREISAQALHVSTVLEVLLRAYATCDQSAVSG
FHSPAGVGLLQQGISAACAADDPDLAERLFEAWLRRANIDQPWNTRLRTE
LRVSLSEVLAGFFAEGGGKQGVFRGLALIGRCRDTGLSPDPRDLLAAMQA
CNAAGLFSLALKLFDELSDATDPDAARSESAGVPGTPDSETQIESSARDK
EGRNREGTAAGRQESGKGGESLAVKEEGDAGEDVMGVLAAGMAGERGPSM
YMEGLRQDIPDGELLPAAAATVALESCFLGGNRDRTMSIVWQLIRRRHPL
TESCRNRAIVALTEGGKPDMALSMARGMEIDGHYTDRATLEFVEKFQERA
FEAAAAAAEKLKTADATGAAAVDDDIFNPSDKLLEKDRQCPERGSEAIDL
VVDEEEQELDGAWVGDGVSDVSNNAVAAEIAAGHGKGGRPDGDGQGKTSG
LVGVVEEAQVAEEEYDTLECEATEGMGAAATDIAVSGKIEEDGRPPEFVL
RFLPLLSEALRNRLRPEEDAANVGGVDDRRGETCTRGELSCQGDSGQLGG
E*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat