prot_A-nodosum_M_contig103.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig103.3.1
Unique Nameprot_A-nodosum_M_contig103.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length551
Homology
BLAST of mRNA_A-nodosum_M_contig103.3.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.160e-30
Identity = 198/553 (35.80%), Postives = 235/553 (42.50%), Query Frame = 0
Query:   62 GSDLGSAGSPQYGSKR-GSGLLGGDIWT-AFPPQDLTLSPQAR--SDHNEDV----ERYTSEHSLFGSSPWRGALGDGGGRGERVRNGQTSF---------------------------------GTPVPGHHEAPRSSTPPGIGTIVAGTIAGGDGGGRSLASGEVGGG-QVHPHLDELHDGGRNRSFEQRASPEGRGAMGYIHSPFQVSPSQQRRHAQQRQQXQYQKPQGFT-------QSSVHRREASTGSSHAARSPP-----FENSIPGEPPSFSGGIPESPSTAAPRSSGIGGLPR------------------ETSPRQAGDHQRRYSLPGPPQANAGTAPRPNHAQLPAYSSHGPQQGSPPLQPQRHRPDHQSFG---RRSSSPAAVSLGGPGDGGGYGGGDSPVLLGVTSHRSPPSTLPTAFSXXXXXXXXXXXXXXXASSIFSSNVSGHSNXXXXXXXXXXXXXGGGSDLGSVGGRXXXXXXXXXXXXXSGNVAVPWRTPPLGSSKADFSGVEEGSSGVAGLYAAAHGSTGGALGWGAVMGTG 539
            GSDLGSAGSPQ+GS R GSGLLGG I++ AF  QDL LSPQ    SDH +D     ER+   HSLFGS+ WRG LG  G                                              G P      + RSS+PP      AG    G  GG +  +G VGGG +   H  +     R  SFE   S +    +GY+ +PFQ  PS+Q         X                 +S HRR+ S+GS  ++RS P       N+   EPP FSG IP SPST+AP S G GG                       SP QAG      SL G          +          SH   Q SPPLQ  R R +   +G   RRSSSP                GD+ V  G T             S XXXXXXXXXXX   +S+IF SNVSGHS+             GG S+LG+                 SGN    WRTPPLGS K D  G E G+         AHGSTGGALGWG++MG+G
Sbjct: 1228 GSDLGSAGSPQFGSSRNGSGLLGGGIFSGAFHAQDLALSPQQAPPSDHKDDGGSGGERFA--HSLFGSASWRGPLGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVP------SSRSSSPP------AGL---GGSGGMARTNGNVGGGLEGSEHRQQRQGHHRRASFEHPPSTDE--GLGYLDNPFQ--PSRQXXXXXXXXXXXXXXXXXXXXXYGVALSASSHRRQGSSGSIRSSRSSPPTAFDHRNTNVSEPPGFSGVIPGSPSTSAPGSGGRGGSGALQWGSXXXXXXXXXFRADNVSPGQAGSXXXXXSLSG----------QXXXXXXXXQVSHS-SQVSPPLQAMRQRHEQPVYGSCSRRSSSP----------------GDASVPGGRTFS-----------SAXXXXXXXXXXXPDDSSTIFGSNVSGHSSYSGFSAMSSMHAFGG-SELGNSSSGGMAGGNAPADGSSSGNNLATWRTPPLGSQKGD-PGDESGNP-------PAHGSTGGALGWGSIMGSG 1712          
BLAST of mRNA_A-nodosum_M_contig103.3.1 vs. uniprot
Match: D7FXG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG3_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.910e-7
Identity = 50/108 (46.30%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  434 ASSIFSSNVSGHSNXXXXXXXXXXXXXGGGSDLG--SVGGRXXXXXXXXXXXXXSGNVAVPWRTPPLGSSKADFSGVEEGSSGVAGLYAAAHGSTGGALGWGAVMGTG 539
            +S+IF SNVSGHS+             GG S+LG  S GG           XXX  N    WRTPPLGS K D  G E G+         AHGSTGGALGWG++MG+G
Sbjct:   56 SSTIFGSNVSGHSSYSGFSAMSSMHAFGG-SELGNSSGGGGMAGVNAAADGXXXXNNNPATWRTPPLGSQKGD-PGDESGNP-------PAHGSTGGALGWGSIMGSG 154          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig103.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3L2_9PHAE1.160e-3035.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXG3_ECTSI2.910e-746.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 404..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig103contigA-nodosum_M_contig103:126722..130008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig103.3.1mRNA_A-nodosum_M_contig103.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig103 126433..130026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig103.3.1 ID=prot_A-nodosum_M_contig103.3.1|Name=mRNA_A-nodosum_M_contig103.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=551bp
MDQRGSFRSEPASGDDGEVPAFTTPSFGQSNRRRSTGGGGGPVVIVGGIR
GDDGGGFHGRGGSDLGSAGSPQYGSKRGSGLLGGDIWTAFPPQDLTLSPQ
ARSDHNEDVERYTSEHSLFGSSPWRGALGDGGGRGERVRNGQTSFGTPVP
GHHEAPRSSTPPGIGTIVAGTIAGGDGGGRSLASGEVGGGQVHPHLDELH
DGGRNRSFEQRASPEGRGAMGYIHSPFQVSPSQQRRHAQQRQQQQYQKPQ
GFTQSSVHRREASTGSSHAARSPPFENSIPGEPPSFSGGIPESPSTAAPR
SSGIGGLPRETSPRQAGDHQRRYSLPGPPQANAGTAPRPNHAQLPAYSSH
GPQQGSPPLQPQRHRPDHQSFGRRSSSPAAVSLGGPGDGGGYGGGDSPVL
LGVTSHRSPPSTLPTAFSSAANNHSNNNHNHDDASSIFSSNVSGHSNYSG
FSGYSAFNAFGGGSDLGSVGGRDGGREGGGGGNGGSGNVAVPWRTPPLGS
SKADFSGVEEGSSGVAGLYAAAHGSTGGALGWGAVMGTGGGGGGRGADQR
*
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