prot_A-nodosum_M_contig10248.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10248.3.1
Unique Nameprot_A-nodosum_M_contig10248.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length59
Homology
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BLAST of mRNA_A-nodosum_M_contig10248.3.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 2.880e-8
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = 0 
Query:   23 APPRTASVFACVTTLTNTLLGVSVVGVAGGFSRAG 57
            A PRTA++FACVTTL+NTLLGVSVVGVAGGF+RAG
Sbjct:   19 AAPRTATMFACVTTLSNTLLGVSVVGVAGGFARAG 53
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10248.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1F5_ECTSI2.880e-885.71Amino acid/polyamine transporter n=2 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10248contigA-nodosum_M_contig10248:7087..7263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10248.3.1mRNA_A-nodosum_M_contig10248.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10248 7087..7263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10248.3.1 ID=prot_A-nodosum_M_contig10248.3.1|Name=mRNA_A-nodosum_M_contig10248.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=59bp
MTLTGSASSPVVPSDAVGATIPAPPRTASVFACVTTLTNTLLGVSVVGVA
GGFSRAGCA
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