prot_A-nodosum_M_contig1024.6.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1024.6.2
Unique Nameprot_A-nodosum_M_contig1024.6.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length808
Homology
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: D8LM99_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM99_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.190e-65
Identity = 125/173 (72.25%), Postives = 147/173 (84.97%), Query Frame = 0
Query:   42 EDCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENIT 214
            ++CSEA LRR++GEEDL  VR LA+ VDT  TQVDHLG ++P LTELRL+RGS L+SFRDLGSSL  LRVLWLSACGV HLDGVGAL+GLEELYLAFND++DLTSIALHD LEVLDLESN ++DA+Q +HLGTC  L SLTL ANPL RD  YRR +V+AVP L SLDE++++
Sbjct:   18 DECSEASLRRITGEEDLRDVRHLALAVDTKTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCLKDAEQAIHLGTCSRLWSLTLTANPLCRDHNYRRRMVEAVPQLASLDEKDVS 190          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A6H5JTQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ1_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 7.210e-65
Identity = 124/171 (72.51%), Postives = 146/171 (85.38%), Query Frame = 0
Query:   44 CSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENIT 214
            CSEA LR ++GEEDL  VR LA+ VDT  TQVDHLG+++P L+ELRL+RGS L+SFRDLGSSL  LRVLWLSACGVRHLDGVGAL+GLEELYLAFND++DLTSIALHD LEVLDLESN V+DA+Q +HLGTC  L SLTL ANP+ RD  YRR +V+AVP L SLDE++++
Sbjct:   20 CSEASLRIITGEEDLRDVRHLALAVDTNTTQVDHLGIVLPLLSELRLERGSVLASFRDLGSSLPNLRVLWLSACGVRHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDAEQAIHLGTCSHLWSLTLTANPVCRDLHYRRRMVEAVPQLASLDEKDVS 190          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A1V9ZB88_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB88_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.380e-38
Identity = 88/176 (50.00%), Postives = 118/176 (67.05%), Query Frame = 0
Query:   43 DCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDR 218
            D +   LR++SG++DL+ V  L +TVDT    V+ LG L+PSL +LRL   S L SFRDLG+SL  L+VLWL +CGV  LDG+GAL+GL ELYL  N I D++ +++HD L V+DLE N V D  Q+  LG CP L +L L  NP++   +YR  V   +PHL SLD++ +T  DR
Sbjct:   68 DLTHDKLRQLSGKQDLTKVTFLQLTVDTAKQSVEALGELLPSLLQLRLHE-SHLHSFRDLGTSLHSLQVLWLQSCGVTDLDGIGALTGLRELYLQHNAIADISPLSMHDELAVVDLEGNAVLDIVQIEQLGLCPQLSALKLQGNPVAAIPQYRSIVASYIPHLASLDDKPVTAADR 242          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A1V9YPU2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YPU2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 4.620e-38
Identity = 94/210 (44.76%), Postives = 135/210 (64.29%), Query Frame = 0
Query:    8 PKPASPKMKKGATIGSVSERSKTHWDEEEYSFDEEDCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDD 217
            P P SP   K      +S+       EE+  F   D ++  LR++SG++DL+ V  L +T+DT    V+ LG L+PSL +L+L + S L SFRDLG+SL  L+VLW+   GV+ LDG+GAL+GL ELYL  N+I D++ +++HD L ++DLE+N V D  Q+  LG CP L +L L  NP++R  +YR  VV+ +PHL SLD++ IT  D
Sbjct:  645 PVPVSPSKVKAPFYADISKS------EEDNPFG--DLTQDKLRQISGKQDLAKVTCLEMTIDTVKQSVEALGELLPSLLQLKLHQ-SVLHSFRDLGTSLHSLQVLWVECSGVKDLDGIGALTGLRELYLKGNEIVDISPLSMHDELSIVDLENNQVFDIIQIEQLGLCPQLSALKLLGNPVARIPQYRPIVVNYIPHLKSLDDKAITSID 845          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A485KIX1_9STRA (Aste57867_7880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIX1_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.600e-37
Identity = 92/201 (45.77%), Postives = 127/201 (63.18%), Query Frame = 0
Query:   34 EEEYSFDEEDCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQV-------------MHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDRRVL 221
            E++  FD  D +E  LR++SG++DL+ V  L +TVDT    V+ LG L+PS+T+LRL + S L SFRDLG+SL  L+VLWL   GV+ LDG+GAL+GL ELYL FN+I D++ +++HD L V+DL+ N VED  Q+              H G CP L SL LA NP++   +YR  V   +PHL  LDE  +   D+  +
Sbjct:   53 EDDNPFD--DITEEKLRQISGKQDLNKVNYLQLTVDTQKQSVEALGELLPSMTQLRLHQ-SILHSFRDLGTSLHGLQVLWLMRSGVKDLDGIGALTGLRELYLQFNEIADISPLSMHDELHVIDLQGNCVEDIVQLEQLGRSIQVLSTNYHSGLCPHLASLNLADNPVASIPQYRPIVCSYIPHLEKLDERAVADADKMTI 250          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: T0SCL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SCL0_SAPDV)

HSP 1 Score: 160 bits (404), Expect = 3.210e-37
Identity = 97/213 (45.54%), Postives = 134/213 (62.91%), Query Frame = 0
Query:    8 PKPASP-KMKKGA-TIGSVSERSKTHWDEEEYSFDEEDCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDR 218
            P PASP K+ + A  +GS+         EE+  F   D +   LR++SG+ DL+ V  L +++DT    V+ LG L+PSL +LRL   S L SFRDLG+SL  L+VLWL  CGV  LDG+GAL+GL ELYL  N I D++ +++HD L V+DL+ N V D  Q+  LG CP L +L L  NP++   +YR  V+  +PHL +LD++ IT  DR
Sbjct:   40 PVPASPVKLSRYADALGSI---------EEDNPFG--DLTHDKLRQLSGKSDLTKVTFLQLSIDTGKQSVEALGELLPSLLQLRLHE-SKLHSFRDLGTSLHSLQVLWLERCGVTDLDGIGALTGLRELYLNGNCISDISPLSMHDELSVVDLQGNAVMDIVQIEQLGLCPQLTALKLVENPVASIPQYRAIVISYIPHLTALDDKPITAADR 240          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: W4G0V7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0V7_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.010e-36
Identity = 88/185 (47.57%), Postives = 123/185 (66.49%), Query Frame = 0
Query:   34 EEEYSFDEEDCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDR 218
            E++  FD  D ++  LR++SG++DL+ V  L +TVDT    V+ LG L+PSL++LRL + S L SFRDLG+SL  L++LWL + GV+ LDG+GAL+GL ELYL FNDI D++ ++LHD L +LDL+ N V+D  Q+  LG C  L  L LAANP++    YR      +P L +LD   +   DR
Sbjct:   56 EDDNPFD--DITDEKLRQISGKQDLNRVTYLQLTVDTHKQSVEALGELLPSLSQLRLHQ-SVLHSFRDLGTSLHGLQILWLMSSGVKDLDGIGALTGLRELYLQFNDIVDVSPLSLHDELHILDLQGNRVQDIVQIEQLGMCVQLTVLNLAANPVAAIPNYRPIACSYIPQLQTLDTAPVAPCDR 237          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A7S3BZ52_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BZ52_9VIRI)

HSP 1 Score: 145 bits (365), Expect = 1.810e-35
Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   48 LLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDR 218
            +LR +SG+EDL  V  L + VD     ++ +G ++PSL EL+L  GS+L++ RDLG+ L  LRVLW+  C V HLDG+GAL  L ELY +FNDI D+  +A  + L  LDLE N VE ADQ+  L  C SL +LTL  NP++  + YR  V   VP L  +D+E +T  DR
Sbjct:    1 MLRLLSGKEDLQGVSYLELAVDAEQMPINEMGAMLPSLRELKLT-GSSLATLRDLGTQLTALRVLWIGRCAVAHLDGLGALPALRELYASFNDIADVGGVAELEELHTLDLEGNRVE-ADQLEWLAACASLRALTLEGNPVAVRQDYRSAVAGTVPQLEYIDDEPVTEADR 169          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A5D6YP06_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YP06_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.160e-35
Identity = 79/177 (44.63%), Postives = 122/177 (68.93%), Query Frame = 0
Query:   42 EDCSEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDR 218
            +D +E  L+++SG++DL+ V  L I+VD+    V+ +G L+PSL +L+L+  STL SFRDLG+SL  L++LW+   G+  LDG+GAL+GL+ELYL +NDI DL+ + LH+ ++V+DLE N +ED  QV  L  C  L +L L ANP+ R   YR+ + + +P L +LD++ +   +R
Sbjct:   97 DDITEDKLQKLSGKQDLARVTYLQISVDSGKQSVEAIGELLPSLQQLKLQN-STLHSFRDLGTSLHSLQILWVIRSGISDLDGIGALTGLQELYLQYNDISDLSPLTLHEEIQVIDLEGNCIEDIGQVEQLAFCAQLTTLNLEANPVCRIAHYRQIIANFLPQLTTLDDKPVADGER 272          
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Match: A0A7S1XUL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.360e-34
Identity = 82/175 (46.86%), Postives = 113/175 (64.57%), Query Frame = 0
Query:   45 SEALLRRVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFRDLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALHDHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVDAVPHLVSLDEENITGDDRR 219
            S+  L+ ++G +DL  V +L+I+VD +  Q+D +G  +P+L  LR    ST+S+FRDLG+SL  L VLW    GV  LDG+ A+  LEELY+AFND+ D  +IA HD L V+DLE N V+D  QV  L TCP L SL+L   P+S    YRR +   +P L  LDE ++TG D++
Sbjct:  255 SQKSLQDITGCDDLDVVTSLSISVDASDCQLDLIGHWLPNLERLRFL-SSTISTFRDLGTSLRNLVVLWAPRAGVAELDGLSAMPCLEELYVAFNDVWDCNAIAFHDSLSVVDLEGNCVDDLTQVKLLSTCPKLSSLSLDGCPISSHPEYRRHICSVLPELTFLDETSVTGSDQQ 428          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1024.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM99_ECTSI3.190e-6572.25Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JTQ1_9PHAE7.210e-6572.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9ZB88_9STRA2.380e-3850.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9YPU2_9STRA4.620e-3844.76Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A485KIX1_9STRA1.600e-3745.77Aste57867_7880 protein n=1 Tax=Aphanomyces stellat... [more]
T0SCL0_SAPDV3.210e-3745.54Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W4G0V7_9STRA1.010e-3647.57Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S3BZ52_9VIRI1.810e-3547.37Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A5D6YP06_9STRA2.160e-3544.63Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1XUL6_9STRA4.360e-3446.86Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 69..221
e-value: 1.6E-29
score: 104.1
NoneNo IPR availablePFAMPF14580LRR_9coord: 92..218
e-value: 9.5E-8
score: 31.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 784..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..270
NoneNo IPR availablePANTHERPTHR22708:SF0LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56coord: 25..568
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 75..216
IPR040091Leucine-rich repeat-containing protein 56PANTHERPTHR22708UNCHARACTERIZEDcoord: 25..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1024contigA-nodosum_M_contig1024:60818..70559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1024.6.2mRNA_A-nodosum_M_contig1024.6.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1024 60348..71664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1024.6.2 ID=prot_A-nodosum_M_contig1024.6.2|Name=mRNA_A-nodosum_M_contig1024.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=808bp
MCERTGPPKPASPKMKKGATIGSVSERSKTHWDEEEYSFDEEDCSEALLR
RVSGEEDLSAVRTLAITVDTTVTQVDHLGVLMPSLTELRLKRGSTLSSFR
DLGSSLARLRVLWLSACGVRHLDGVGALSGLEELYLAFNDIDDLTSIALH
DHLEVLDLESNNVEDADQVMHLGTCPSLCSLTLAANPLSRDKRYRRFVVD
AVPHLVSLDEENITGDDRRVLPLPGQEPQDVISAKPAQALPPTDLYCNRN
EPLPPQKRNSEDHKHHREVDASSPFEAHRDDAAPLECQAGPRARLPGMTD
IAAVCLRGGGGTVGDNCHTDVKLAWDLMSPLIVDKLSRKQLDGNTAADAV
NAQPLHDEGISCCDHQEHRRVFTGRDAARDPHKEVERVCQGIGGAGGERC
GGEGVGSTITPPRDVGVVDVGYDPPVVDEERVVSEAVKYFWRSAKYNRVG
RDTAEGCLDALGRGKANKIDMSDRQSIGEDGDYAAVRGGPGGYVAEVLRL
PGMTSANSRIYPEGENASSALTHGCEVSIAGNPAFGLRRRRVSERPTPTV
TGRNPSEKHAQQTQAVTKSVSPPGPLIQRPATTDGNLRRRANSCVVKLAF
GGCENPSKVDEATRVEKARVGLGKSAEGNSMFLEDRLAAPPTERDATVDR
GDRQVMDSETTATEEEGRTAAALGRIAFIQRKPCAVAHDNHSDGNRRWWS
EGQPEMLGSVDSDHSSSCADVCSYDEAGGGFEEVPESSPTTASASAGSNR
RCFVGSCCPDLCGVECNGDGTRPREMKTQIAHLFAKSGGGQPTKGLVEEK
PQLGRQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR040091LRRC56