prot_A-nodosum_M_contig10.99.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.99.1
Unique Nameprot_A-nodosum_M_contig10.99.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1366
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.99.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1139..1166
NoneNo IPR availableCOILSCoilCoilcoord: 1212..1253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 584..601
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1312..1332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1291..1365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 949..1087
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..601
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1297..1311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 954..980
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1053..1067
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:971909..982841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.99.1mRNA_A-nodosum_M_contig10.99.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 971862..984200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.99.1 ID=prot_A-nodosum_M_contig10.99.1|Name=mRNA_A-nodosum_M_contig10.99.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1366bp
MPLPGFKMANELKVAESVTTMTNNGVGEARPKLARKQPSRCKKDDADQGS
SPSSGKRPTCCGGDDEDNKKARAGTQSSPGKNNNNKGSRRDDAVVRDGNT
IISSAVDAAAGGLDHITVGGNGGRDMYKNKNESASADRERAPVEAGRSSP
VSTRTEDSGVHASCPVSNDSAIVDRGSIIISSSVCTGTRDKPTTGLLRSL
MIGPTQDRRSTMELYRQTLSSSSPVSSSSSTLQSSRRKAQRNQPEDGGGE
DTHNQGRPRARGMSPPDTTTADAPNSDQDASSGSDRVTTAPSIRSKLPSA
AAVAAAAAIFPSDQGDGNSEVPCDHADGAERRAGEGPTAERSGERWQPAR
SPGGSGGLKEGTSDEGRRRENSGSADVDGGGRTETFVRNCAPFPAPLDGR
RGAWTRTIGTTQEGGFLGQSSFGEEDEEWRRLQSSTGSRAPGLPEGGSTG
LVRTVTEEPWQEGAFGREDEKGREQSDHLPGGGNCGSTMGTTGTAEGNYV
EHHLVRQFQGWDGHRKRQLNMRQEEHQFTRWQQQQLQQQRLLEKQLDMLR
TSHLQLRRDQQRSGSLGSGLRDSRGECSEPTVPSYRPPTLSSRAPTSLEK
QQQQLVQRHQLVDGGRDVPSDVAACLPHSEESHSVYLSVPPDGCDNRALA
MPTPPGPDSRLDRLPSPGRSRLPFFPDPQAQEHCQQQEQHHVCVEHSHPH
PQRYHPTPSFAFSQTASLGYPSPLQEAGQPFLPSQNLHTQWPREEVGGMP
HPASVGPKAVNDRSCAGAGDFRGGTQDGNCSGGVGDHTDTTLAMRPIKLD
RSVTTLDGVYAKAGEEGAHNRQVVQVLKNEMDATRSELVMARTASSDPNA
DTANAAPENPIVYLDGTSPSSTAGSTPKFTAARQTEETRVSLGRSVGRAG
VVHPSPVPFTEASRVDSMPIGAMDPQPPIVTSVEAPAATETMETSTGFLG
EGKTAAEEGDEAVIESRDHIAQEGRGLSKRPRRASPTPVGSGNGNGNCRE
DRQEAAPPEPLTARSTIAAVVSARDTVPLADQPPSVPALQAPGGERPGYV
RDCISSGSSSDTTDLAESTPPARAIPGSPAATAAHSPIVPTASSSVDVVS
LALDAPPSERPPGGRVGAKGRRRPRGRFSWGDGAGLELIVEASTKLSELE
SGYNRQQENARALDLERRRSRDLEACLEGARSSLRDRDIALKDRDLTITR
LSVEVAQNTDRAEAMRGQLASLKAAIQCMEEQLEAKDTENKRLANEIAQQ
RHSAHIPSVRSAASPAFSFGLCGGGGGGTAASVAPGGALPRDILSFGSTQ
HHPQDYPSRQQQPPLQLPPPLLNLPLAPPRQVQHPHPYHHQHSHPHHQLQ
HDREYQHQQQQGYRF*
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