prot_A-nodosum_M_contig1.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1.17.1
Unique Nameprot_A-nodosum_M_contig1.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length642
Homology
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BLAST of mRNA_A-nodosum_M_contig1.17.1 vs. uniprot
Match: D7FU78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU78_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 2.200e-57
Identity = 161/442 (36.43%), Postives = 223/442 (50.45%), Query Frame = 0 
Query:   16 VPSITKAAETLSWVSEALRKEMQDDLEADS--DGVLKNADIDVSSMKLVTNRAFLTNKIKRALSHWEELSDRIPLRKQRPTGIARGRVGGVDDMVEDFNINEHEIPLEPPDRSDPSTNDVDVYRYHVQRLFCSVPKKASLTGRLAEGSVPLRTLQVKQHLEDNPNMRPTGDAHLLKEINYAAENQPALADETVHFTASTNPAAAAAPKSTVG-ATIAASGGSGD-------------------------------------------------------------AGRYAG-RILPSFSRPSRAVVTFALYRAPAREGTSDSLSSVSLVGPLQERRMYEVEALEHNTLQQVM-------------------EVMPSCLGDRASDLERRKMSWSLVG------PSTGTQGRGRLSLGGGFIFIRGVFYMTKPSPGEDTREALP 367
            VPS+ +  ET +W+ EAL++++Q D+E+D      L++ DID+SS++++ NR  L +KI+ AL+ W++L+  IPL++QRP G+  GR+ G DDM  DF+I+E  +PLEPP       +DV +Y+Y+VQR+  +VP+  SL GR  EG VPLR  +VK  L D    +P GD HLLKE N+ +E +     E     A +  AA  AP S  G A  A + GS                                                                G  +G RI  SFS PSRAVVTFALYR+ A+         + L G L E+R++EVEALEHNTLQQ+M                   + MP CL DR  +  R+       G      P  G+  +  L+L  GF+FIRGVFY+TKP+ GED  +  P
Sbjct:   23 VPSVGETVETCAWLGEALKRDLQQDVESDDAQGQALRDTDIDLSSLRILPNRELLHSKIREALTCWDKLAQCIPLKRQRPEGLV-GRMAGSDDMYLDFDIDETTVPLEPPQ----GVSDVQLYQYYVQRIMSAVPRANSLKGRTTEGPVPLRICRVKNQL-DIALSKPYGDIHLLKETNHISEEKRHRVAEE----AFSRSAAGEAPNSRDGVAAEAVANGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGALSGQRIFQSFSGPSRAVVTFALYRSAAKG------KGLRLPGHLPEKRLFEVEALEHNTLQQIMGGWIIKESKNLMTNEWDERQAMPPCLTDRIMEERRQGCCGDAQGKVLMPPPEPGSSRQKGLALARGFVFIRGVFYVTKPTAGEDVSDVPP 448
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BLAST of mRNA_A-nodosum_M_contig1.17.1 vs. uniprot
Match: A0A6H5KJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 6.520e-23
Identity = 61/152 (40.13%), Postives = 96/152 (63.16%), Query Frame = 0 
Query:   16 VPSITKAAETLSWVSEALRKEMQDDLEA-DSDG-VLKNADIDVSSMKLVTNRAFLTNKIKRALSHWEELSDRIPLRKQRPTGIARGRVGGVDDMVEDFNINEHEIPLEPPDRSDPSTNDVDVYRYHVQRLFCSVPKKASLTGRLAEGSVPLR 165
            VPS+ +  ET +W+ EAL +++Q D+E+ D+ G  L+ ADID+SS++++ NR  L +KI+ AL+ W++        +Q  T +A     G DDM  D++I+E  +P EPP       +DV +Y+Y+VQR+  +VP+  SL GR  EG +PLR
Sbjct:   23 VPSVRETVETCAWLGEALTRDLQQDMESNDAQGQALREADIDLSSLRILPNRELLHSKIREALTCWDKA-------RQNRTMMA-----GSDDMYLDYDIDETTVPPEPPQ----GVSDVQLYQYYVQRIMSAVPRAHSLKGRTTEGPIPLR 158
[Close]
BLAST of mRNA_A-nodosum_M_contig1.17.1 vs. uniprot
Match: A0A6H5KW97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW97_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.300e-8
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:  244 ILPSFSRPSRAVVTFALYRAPAREGTSDSLSSVSLVGPLQERRMYEVEALEHNTLQQVM 302
            +  SFS PSRAVVTFALYR+ A+         + L G L E+R++EVEALEHNTLQQVM
Sbjct:    1 MFQSFSGPSRAVVTFALYRSAAKG------KGLRLPGHLPEKRLFEVEALEHNTLQQVM 53
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FU78_ECTSI2.200e-5736.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJY6_9PHAE6.520e-2340.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW97_9PHAE2.300e-859.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..642
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:310492..320623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.17.1mRNA_A-nodosum_M_contig1.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1 310142..320623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1.17.1 ID=prot_A-nodosum_M_contig1.17.1|Name=mRNA_A-nodosum_M_contig1.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=642bp
MSKKKCAKNSCKIAKVPSITKAAETLSWVSEALRKEMQDDLEADSDGVLK
NADIDVSSMKLVTNRAFLTNKIKRALSHWEELSDRIPLRKQRPTGIARGR
VGGVDDMVEDFNINEHEIPLEPPDRSDPSTNDVDVYRYHVQRLFCSVPKK
ASLTGRLAEGSVPLRTLQVKQHLEDNPNMRPTGDAHLLKEINYAAENQPA
LADETVHFTASTNPAAAAAPKSTVGATIAASGGSGDAGRYAGRILPSFSR
PSRAVVTFALYRAPAREGTSDSLSSVSLVGPLQERRMYEVEALEHNTLQQ
VMEVMPSCLGDRASDLERRKMSWSLVGPSTGTQGRGRLSLGGGFIFIRGV
FYMTKPSPGEDTREALPPPPNVTVKTLHAKTKKSRALLTEHMNLQRSREK
ALEQKQERLLRKKSRQKGPETAGVNGVRDSDPDATIQTIDGSDVSTRPSF
AHPPTNPSQDFEIPSCTGEGEMYVTSPAVDTSNVSNSLPWRSLSRILLTR
SVEDSRPCPPHPWIKRWLEIGGKTWSTRKLELLEDAGKFKHAEELNAAAE
EALLVSAASRSGNVASAQDEEVELEVEAKAVAAAGAALWAATEAVQSLLS
RRTERVGSLTGEARGVIEREDSATAVEARERGERGRGSGLPR
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