prot_A-nodosum_M_contig1.116.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1.116.1
Unique Nameprot_A-nodosum_M_contig1.116.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length655
Homology
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: D8LTV2_ECTSI ((R)-citramalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV2_ECTSI)

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 470/600 (78.33%), Postives = 526/600 (87.67%), Query Frame = 0
Query:   51 VSSTRTTSTSITPEVDGVQRQEVA-NSIHVNNKQSHAAKLVDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVGEHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQSCSIEKGS 649
            V ++  T+  +  +V    RQ  +  ++ ++  +    + V++YDTTLRDGTQMEG+SASV DKLKI  +LH+FGMHYIEGGWPGSNPKDVEFFERA++ELP EAW +VVAFGSTRRK+K C EDKQLESLISAGT CVTIVAKAWDLHVDHILEVPREENLAMVRESV HLKMAGKEVMLDLEHFFDG KAN +YTMQVC+AAV A VDVLV+CDTNGG+LPWE+DE V+ VKAAYP  RLGIHCHNDQGLAVANSLQAVRSG DVVQGTVNGIGERTGNANL+TIIPTLQLKMGM GVGEHLTNLTALSRFT EQ NMA  SGAPFTG+S+FAHKGGIHVSAVNKIPDSYQHIDPA VGN +RVLVSELSGQSNI++KVE+SGMAS  E+KAS VWR+R+GQVLKTVK LE +GY++EGADASVNLLVRRTMSGYVPPF L+DYLVQ WDS+ T GGLEF S PTTA+ATVKVRVPS +S   + IE E+PGVRLEVAEGNGPV+ALAK LFRALLPTFP+L +V LSDYKVRILDQESAT+A TRVLIEF++K SDV WSTVGVNTNIISASM AL+DG EYA+VEFGQSCSI+ G+
Sbjct:    5 VPTSTVTTHGVNGDVGKGDRQATSPGALVMDQPEGEVLRTVEMYDTTLRDGTQMEGISASVLDKLKIALQLHHFGMHYIEGGWPGSNPKDVEFFERARKELPAEAWERVVAFGSTRRKFKACAEDKQLESLISAGTGCVTIVAKAWDLHVDHILEVPREENLAMVRESVEHLKMAGKEVMLDLEHFFDGWKANREYTMQVCEAAVGAKVDVLVLCDTNGGSLPWEIDEIVRDVKAAYPGTRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGEHLTNLTALSRFTDEQFNMAHTSGAPFTGISAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNMKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPSGPTTARATVKVRVPSMDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESATQAKTRVLIEFYEKSSDVGWSTVGVNTNIISASMSALMDGFEYALVEFGQSCSIDAGT 604          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A836CCG4_9STRA ((R)-citramalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG4_9STRA)

HSP 1 Score: 707 bits (1825), Expect = 3.700e-247
Identity = 392/649 (60.40%), Postives = 452/649 (69.65%), Query Frame = 0
Query:   82 KQSHAA--KLVDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVV-----------AFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIG--------------ERTGNANLVTIIPTLQLKMGMQGVGEHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLL------------------VRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPT--------TAQATVKVRVPSGES---TLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYK---------------------------VRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQSCSIEK 647
            +Q HAA  +LVD+YDTTLRDGTQMEG+S SV+DKLKI R L NFGMHYIEGGWPGSNPKD EFFERAK E P + W ++            AFGSTRRK  TCE+DKQL +LI+AGT+CVTIVAKAWDLHVDHILEVPREENLAMV ESVA LK AGKEVM+DLEHFFDG KAN  YTMQVC+ AV+AG DVLV+CDTNGGTL WEVD++V+ V +A+P VRLGIHCHNDQ LAV+NSLQAV+SG  V                       ERTGNANL +I+PTLQLKMG  GVGE L  LTAL RF  EQLN   DS AP+ G S+FAHKGGIHVSAVNKIPDSYQHIDPA VGN RR LVSELSG+SNI++KVEE GM S  E  +S  W+ R+ +VL  VK LEK+G TFEGADA+VNL+                  +RR M GY  PF LMDY V   D   T G    R + T        + +ATVKV++P+G S   +LA   ++ D   RLE AEGNGPVNALAKAL +ALLPTFP+L +VVL DYK                           VRILDQESAT ANTRV+IEF D   + QW+TVGV+TNIISASM AL+DG EYA+VE+   CS+++
Sbjct:   24 RQQHAAPPRLVDIYDTTLRDGTQMEGISVSVDDKLKIARVLSNFGMHYIEGGWPGSNPKDAEFFERAKAEPPPDVWSRIAEXXXXXXXXXAAFGSTRRKNSTCEQDKQLATLIAAGTNCVTIVAKAWDLHVDHILEVPREENLAMVGESVAFLKAAGKEVMIDLEHFFDGFKANPAYTMQVCERAVEAGADVLVLCDTNGGTLGWEVDQAVRTVASAFPGVRLGIHCHNDQELAVSNSLQAVQSGATVXXXXXXXXXXXXXXXXXXXXXXXERTGNANLASIVPTLQLKMGCAGVGERLPELTALCRFVDEQLNRLPDSKAPYVGQSAFAHKGGIHVSAVNKIPDSYQHIDPAAVGNVRRTLVSELSGRSNILSKVEEFGMGSKEEF-SSPEWQDRMNRVLTAVKTLEKRGSTFEGADATVNLIEPLRXXXXXXXXXXXXXMIRRLMPGYTAPFRLMDYTVTAAD---TMGSDALRGEETGTPGSVMPSVRATVKVKLPAGVSQMESLASFWDNGDRTQRLESAEGNGPVNALAKALNKALLPTFPSLQHVVLKDYKASRRPAQLPELRVFVGEVVQELKFQLKVRILDQESATAANTRVMIEFMDSHHNQQWATVGVDTNIISASMCALMDGFEYALVEYAPCCSLDR 668          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A7S2UWY3_9STRA ((R)-citramalate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY3_9STRA)

HSP 1 Score: 630 bits (1624), Expect = 3.800e-217
Identity = 335/577 (58.06%), Postives = 421/577 (72.96%), Query Frame = 0
Query:   90 VDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVGEHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPT---------TAQATVKVRVPS---GESTLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQ---ESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQ-SCSIEKGSE 650
            V++YDTTLRDGTQ E +S SV  KL+I   L  FG+HYIEGGWPGSNPKD EFFERAK EL  EA  K+ AFGSTRRK+K   ED Q+ +L+ +G  C+ +V K+ D HVD ILEVPREENLAMV +S+ +LK  GKEVMLDLEHF DG K+N QY+M VC+AAVDAGVDVLVMCDTNGG+LPWEV    + V+  +P+VRLGIHCHNDQ LAVAN+L+AVR G  VVQGT+NG+GERTGNANL ++IP LQLKMG  GVG+ L +LT++SRF+ E +N + +  APF G S+FAHKGGIHVSA+ K P SYQHI+P  VGN +RVLVSEL+G+SNI+TKVEE G+    +    NVW++R  Q+L  VK LEK GYTFEGA+ASVNL++RR+   Y PPF + DY++Q WD +  S  + F SDP+         +A+ATVKV V      E  L            LEVAEGNGPVNALA AL + L+PTFP L  + LSDYKVRILD    +S T +  RV+++F     D +++TVG ++NIISAS+ AL+DGLEYA++  G+ +C+++  +E
Sbjct:   92 VEIYDTTLRDGTQAESISVSVEGKLRIAERLAEFGVHYIEGGWPGSNPKDKEFFERAKTELSPEARTKLTAFGSTRRKFKKAAEDSQIAALVDSGVDCICLVGKSSDFHVDKILEVPREENLAMVHDSIHYLKGLGKEVMLDLEHFIDGFKSNPQYSMSVCQAAVDAGVDVLVMCDTNGGSLPWEVAHVTREVRKMFPEVRLGIHCHNDQELAVANTLEAVREGATVVQGTINGLGERTGNANLCSVIPNLQLKMGYHGVGDKLKDLTSVSRFSDELMNRSPNPAAPFVGASAFAHKGGIHVSAIAKNPLSYQHIEPEEVGNLKRVLVSELAGRSNIMTKVEEYGLI--GQDSDLNVWKERSVQILNKVKALEKSGYTFEGAEASVNLMLRRSSDMYTPPFAIQDYMLQIWDQDVDSV-MRF-SDPSVVEPYYFHGSARATVKVLVMEHTCNEKQL------------LEVAEGNGPVNALANALMKGLVPTFPVLEELELSDYKVRILDMSCGKSGTSSVVRVMMDFKKSNGD-KYTTVGADSNIISASLNALVDGLEYALI--GELNCAVDYDTE 649          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A6V1Q1T2_HETAK ((R)-citramalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1T2_HETAK)

HSP 1 Score: 619 bits (1595), Expect = 7.040e-213
Identity = 344/634 (54.26%), Postives = 432/634 (68.14%), Query Frame = 0
Query:   15 LVGAFVHPVQHLGCSRPNSRAGGFRKTHIQVR-VPRMVSSTRTTSTSITPEVDGVQRQEVANSIHVNNKQSHAAKLVDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVGE-HLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDED----PGVR--LEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESA--TRANTRVLIEF--HDKVSDV--QWSTVGVNTNIISASMIALLDGLEY 634
            +VGA+   V  L CS         R+T   ++ +  +  ST   S  +T E+D V   +  +    N     +AK +D+YDTTLRDGTQ E VS +V+ KL I + L  FGM YIEGGWPGSNPKD EFF RA+ ELP   W +VVAFGSTRRK+   E+DKQ+  L+ +   CV IV K+WDLH+D ILEVPREENLAMV +SVAHLK AG+EVMLDLEHFFDG+ ++   T+ VC+AAVDAGVDVLV+CDTNGG LPWE++  V+ V A +P VRLGIHCHNDQ LAVANSL A+R+G  +VQGTVNG+GERTGNANL +++PTLQLKMG  GVG   L  LT LSRF  E +N    +  P+ G S+FAHKGGIHVSA+ K P SYQH+DP  VGNTRRVLVS+L+G+SNI+ KV+E G+    +++ +  W     Q+L  +K LEK GY+FEGA+ASV L++RR +  Y PPFN++DY  Q  D   TS  +  R     A A +   + SG++   V +E  D     G R  LEVAEGNGPV+AL +AL R L P FP L  V LSDYKVRILD + A  T + TRV+IEF  H++ + +   W+TVGV++NIISAS  AL DG EY
Sbjct:    9 IVGAWAILVLALFCSGFVPSPHQTRQTRTLIKSISSLRMSTMDNSKEVTSEMDDVLSSQRTS----NMPDGLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLC-VTDVECA-AWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGL---LASGQARATVKMEVSDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEY 633          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A1Z5JTT2_FISSO ((R)-citramalate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTT2_FISSO)

HSP 1 Score: 558 bits (1438), Expect = 1.830e-189
Identity = 314/618 (50.81%), Postives = 411/618 (66.50%), Query Frame = 0
Query:   51 VSSTRTTSTS-------ITPEVDGVQRQEVANSIHVNNKQSHAAKLVDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDE-SVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQ-GVGEHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSG-------GLEFRSDPTTAQATVKVRVPSGES-------TLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQSCSI 645
            +SST+T+S         +TP  DGV          V  K  HA     +YDTTLRDGTQ E VSAS +DKLKI R L  FG+ YIE GWPGSNPKD EFF RA+ ELP+ A  K+VAFGSTRRK  + ++D Q++ LI +    V IVAK+    V  IL+   +ENL M+R++V HL  AG++VM+D+EHFFDG  A+  Y +Q C+AA DAG   LV+CDTNGGT+PW V + S ++V+     V +GIHCHND G+AVANS+ A ++G+ ++QGT+NGIGERTGNA+L +IIPTL L MG      + L NLT++SR+  E LN + +  AP+ G+S+FAHKGG+HV+A+ + P SYQHIDPA VGN  RVL+SELSG+ NI++K+E +G+   +E   ++    R   +L  VK LE  GYTFEGA+ASV+L++     GY PPF ++DY  Q +DS   S        G+   S   TA+AT+KVR  SG S       T     ED     RLEV +GNGPV+ALA AL RA+ P+ P L N+ L DYKVRILD +SAT+A TRV+IEF D   D +W+TV V+TN+ISAS+ AL+DG EYA++E  QSC +
Sbjct:   32 LSSTKTSSDQWVQKAFQVTPTTDGV----------VGPK--HAI----IYDTTLRDGTQGESVSASADDKLKICRRLAEFGVDYIEAGWPGSNPKDAEFFRRAQTELPETARAKLVAFGSTRRKNTSADQDTQVQLLIDSKAPTVCIVAKSHSWQVQEILKADLQENLDMIRDTVQHLTNAGRQVMVDMEHFFDGYAADPAYALQCCEAAADAGATCLVLCDTNGGTMPWTVGQVSQRVVRHFDRYVTIGIHCHNDCGMAVANSVSACQNGIGLIQGTINGIGERTGNADLCSIIPTLALHMGSNIACKKQLLNLTSVSRYVDEILNRSPNVAAPYVGISAFAHKGGLHVAAMERSPLSYQHIDPALVGNEMRVLISELSGRQNILSKMEAAGV-DISETGTND----RALAILNRVKELEAVGYTFEGAEASVHLMILHATRGYCPPFRVLDYSAQVYDSNIDSATRVMKKHGISSSSLAPTARATIKVRTVSGSSDDDDCDTTNRPPFED-----RLEVGDGNGPVDALAAALTRAVTPSHPYLKNIELVDYKVRILDPQSATQAATRVMIEFRDTQKDTKWTTVSVDTNVISASLNALVDGFEYALIEHSQSCPL 623          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: R7QGZ5_CHOCR ((R)-citramalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGZ5_CHOCR)

HSP 1 Score: 555 bits (1431), Expect = 2.100e-189
Identity = 296/570 (51.93%), Postives = 384/570 (67.37%), Query Frame = 0
Query:   87 AKLVDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVGEHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAE-MKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSE----PTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDEDPG------VRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQSCSI 645
            ++ + +YDTTLRDG Q EG+S SV DKLKI   L  FG HYIEGGWPGSNPKD  FFE  + +L +    K+VAFGSTR K  TCE+D+ ++ L +A T  VT+V KAWD+ V  +LE   EENL M+RESVA+ K  G+EVMLD EHF+DG KA  +Y +   +AAVD GVDVLV+CDTNGG++PW++ +    V   +P  R+G+HCHND  LAVANS+ AV +G  +VQGTVNG GERTGNANL++I+PTLQLK+G   VG+ L+ LT+LSRF  E       SG PF G+SSFAHKGG+HV+AV K  D+YQHIDP+ VGN +R+LVSEL+G+ N+++K EE G+  A +   A   W  R  QVL  VK LE +GY+FEGA+AS+ L++RR++ GY PPF L+D+ V T +      P S G  F    T  QATVK+ +          +  +D G      + LEVAEGNGP++A+  AL + L   +  L  V L+DYKVRILD ESAT A TRV+++F D  S  QW+TV  + NII AS+ AL+DG E A+ +    C I
Sbjct:    5 SRCIQVYDTTLRDGAQGEGISLSVADKLKIATRLDEFGAHYIEGGWPGSNPKDAAFFENCRGKLKR---AKLVAFGSTRYKNTTCEKDRNVQMLANADTLVVTLVGKAWDMQVQVVLEASLEENLDMIRESVAYFKRLGREVMLDAEHFYDGYKAAPEYAIACLQAAVDGGVDVLVLCDTNGGSVPWDLQKVTATVVHRFPATRVGVHCHNDMELAVANSISAVNAGASLVQGTVNGYGERTGNANLMSIVPTLQLKLGYACVGDALSKLTSLSRFVDEIACQKPVSGQPFVGVSSFAHKGGLHVAAVLKNEDTYQHIDPSLVGNEKRILVSELAGRRNVLSKAEELGLVPAGDDAGARQEWGNRAKQVLGQVKDLENKGYSFEGAEASLELMLRRSVEGYRPPFELLDFSVTTDNKRIHYGPNSEGPPFNESVT--QATVKIAL----------LGPKDGGEACPTKICLEVAEGNGPIDAVNGALGKVLFSMYQPLQTVALTDYKVRILDSESATAATTRVVVDFEDSASGRQWTTVYAHPNIIVASVNALMDGFEVAMWDSLPQCCI 559          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A2V3IHB1_9FLOR ((R)-citramalate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB1_9FLOR)

HSP 1 Score: 551 bits (1421), Expect = 1.440e-187
Identity = 297/562 (52.85%), Postives = 382/562 (67.97%), Query Frame = 0
Query:   88 KLVDLYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVGEHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDP---TTAQATVKVRVPSGESTLAVSIEDEDPG-VRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQSCSI 645
            K V +YDTTLRDG+Q EG+S +V DKLK+ + L  FG HYIEGGWPGSNPKD  FF + K  L      K+VAFGSTR K  TCE DK +++L+ A T  VT+V KAWD  V  +LE   +ENLAM+ ++VA  K  G+EVMLD EHF+DG KA+  Y +    AAV AGVDVLV+CDTNGGTLPWE+DE  ++V A +P VR+GIHCHND  LAV+N++ AV +G  +VQGT+NG GERTGNANL++I+PTLQLKMG   VG+ L  LT LSR+T E  N       P+ G SSFAHKGG+HV+AV K  ++YQHIDP  VGN RR+LVSELSG+ NI+TK EE G+  A E K    W  R+  VL+ VK LE +GY+FEGA+AS+ L++RRT+ GY PPF L+D+ V T D++    G    + P   +  QA+VK+ +   E        D+ P  +  E+AEGNGPV+A+  AL + LLP +  L +V L DYKVRILD  S T A TRV++EF +  +  +W+TV  + NII AS+ AL+DG E A+ +    C I
Sbjct:   29 KTVQIYDTTLRDGSQGEGISLTVPDKLKLAQRLDEFGAHYIEGGWPGSNPKDESFFAQCKG-LDN---AKLVAFGSTRYKGTTCEHDKNVQALMKADTPVVTLVGKAWDHQVSVVLEATLDENLAMISDTVAFFKRKGREVMLDAEHFYDGYKASPAYALSCLHAAVKAGVDVLVLCDTNGGTLPWEIDEITRVVVAEFPTVRIGIHCHNDMELAVSNTIAAVHAGATLVQGTINGFGERTGNANLMSIVPTLQLKMGHDCVGDRLQQLTDLSRYTDEITNQPHVPNRPYVGASSFAHKGGLHVAAVLKDENTYQHIDPVLVGNERRILVSELSGRRNILTKAEELGLHPADESKDGVEWNVRVKAVLEQVKELENKGYSFEGAEASLELMLRRTVHGYRPPFELLDFSVST-DNKRVVYGNVLNATPNNESVTQASVKLALLGPEDG-----GDQCPTKICFEIAEGNGPVDAVNGALQKCLLPVYAPLRSVSLVDYKVRILDNASGTAAITRVMVEFEESSNGKRWTTVYAHPNIIVASVNALMDGFEVAMWDQLPQCII 580          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A7C5E488_9CHLR ((R)-citramalate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E488_9CHLR)

HSP 1 Score: 535 bits (1379), Expect = 4.250e-182
Identity = 293/547 (53.56%), Postives = 367/547 (67.09%), Query Frame = 0
Query:   92 LYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVG-EHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVV 637
            LYDTTLRDGTQ EG+S S NDKLKI ++L  FG HYIEGGWPGSNPKD EFF R  +   K A  K+ AFGSTR K  TC++D  +++L+ A T  VT+V K+WDLHV HILE   EENL M+ ESVA+ K  GKEV+ D EHFFDG KAN  Y +   +AA+ +G D +V+CDTNGG+ PWEV+E  + V A +   RLGIH HND  L VAN+L  VR G   VQGTVNG GER GNANL++IIP LQLKMG + V  E L  LTALSR+  E  NM  +   PF G S+FAHKGGIHV+A+ K+ +SYQH+DP  VGN +R +VSELSG+ NI+ K  E G+ ++         R+   QVL+ +K LE QGYTFEGA+ASV++++RR  SGY PPF ++D++V T   E   G   F       +ATVKV+V            DE   +R  VAEGNGPVNAL  AL RAL   FP L  V L+D+KVRILD ++ T A TRV+I+F  + +   W+TVG + NII AS  AL+D +EYA++
Sbjct:    6 LYDTTLRDGTQGEGISLSCNDKLKIAQKLDEFGAHYIEGGWPGSNPKDAEFFARQGELKLKHA--KIAAFGSTRYKNTTCDKDANIQALVEANTPVVTLVGKSWDLHVRHILETDLEENLEMIAESVAYFKERGKEVIYDAEHFFDGYKANPDYALLTLQAAIKSGADCVVLCDTNGGSTPWEVEEITKQVAARFEGQRLGIHPHNDCELGVANALAGVRGGARHVQGTVNGYGERVGNANLISIIPDLQLKMGYECVKPEQLAGLTALSRYVDELANMTPNPHQPFVGYSAFAHKGGIHVAAILKVEESYQHMDPTVVGNEKRAVVSELSGRGNILYKAAERGLDTS---------REEARQVLEQIKELENQGYTFEGAEASVDMMLRRANSGYKPPFEVIDFMVIT---ENRQGRGLF------TEATVKVKVG-----------DE---IRHTVAEGNGPVNALNLALRRALYQDFPQLQRVHLTDFKVRILDSDAGTAATTRVMIDFQQEGTTEFWTTVGAHPNIIEASWRALIDSMEYALL 518          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A3M1GUB2_9CHLR ((R)-citramalate synthase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1GUB2_9CHLR)

HSP 1 Score: 533 bits (1372), Expect = 5.960e-181
Identity = 280/547 (51.19%), Postives = 364/547 (66.54%), Query Frame = 0
Query:   92 LYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVG-EHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVV 637
            +YDTTLRDGTQ EG+S S NDKLKI ++L  FG+HYIEGGWPGSNPKD EFF R  +   K A  K+ AFGSTR K  TC+ D  +++L++A T  VT+  K+WDLHV H+LE   EENL M+ ESV + K  GKEV+ D EHFFDG KAN +Y M   KAAV+ G D LV+CDTNGGT+PWEV+E    V+  +P+V++GIH HND  L VAN+L  VR G   +QGTVNG GER GNANLV+IIP LQ+KMG + V  E L  LT L+ +  E  N+  +S  P+ G S+FAHKGG+H +A+ K+ +SYQHIDP+ VGN RR +VSEL+G+ NI+   E  G+ +  E            Q+++ +K LE +GY FEGA+ASV +++RR   GY PPF ++D++V T   E   G   F       +ATVKV+V  G+             +R  V+EGNGPVNAL  AL +AL   FP L ++ LSDYKVRILD +S T A TRV+I+F+D+     W+TV  + NII AS  AL+D +EYA++
Sbjct:    6 IYDTTLRDGTQGEGISLSCNDKLKIAKKLDEFGVHYIEGGWPGSNPKDAEFFARQGELNLKHA--KIAAFGSTRYKGNTCDNDPNIQALLAANTPVVTLFGKSWDLHVTHVLETDLEENLDMILESVRYFKNRGKEVIYDAEHFFDGYKANPEYAMLTLKAAVNGGADCLVLCDTNGGTMPWEVEEITATVQKQFPEVQIGIHAHNDAELGVANTLAGVRGGAVHIQGTVNGYGERVGNANLVSIIPDLQIKMGYRCVSDEQLAKLTELAHYVDEIANLTPNSHQPYVGQSAFAHKGGVHAAAIRKVEESYQHIDPSLVGNRRRTIVSELAGRGNILDMAEALGLKTTKE---------EARQIVQQIKDLEAEGYAFEGAEASVQMMIRRASEGYKPPFEVIDFMVVT---ENRQGRGLF------TEATVKVKV--GDK------------IRHTVSEGNGPVNALNLALRQALYEDFPQLRHIHLSDYKVRILDSDSGTAATTRVMIDFYDETRPKTWTTVAAHPNIIEASWRALIDSMEYALL 518          
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Match: A0A369BWZ1_9GAMM ((R)-citramalate synthase n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369BWZ1_9GAMM)

HSP 1 Score: 532 bits (1370), Expect = 1.620e-180
Identity = 292/547 (53.38%), Postives = 366/547 (66.91%), Query Frame = 0
Query:   92 LYDTTLRDGTQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQELPKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVDHILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVCKAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQGLAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVG-EHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDSYQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQRLGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTWDSEPTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDEDPGVRLEVAEGNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLIEFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVV 637
            +YDTTLRDGTQ E +S S +DKL + R L  FG+HYIEGGWPGSNPKD EFF R +    ++A  KV AFGSTRRK+  CE+D  L++L+ A T  VT+VAK+WD HVD +L+  REENLAMVR+SVA++K  G+EV LD EHFFDG KAN  Y + V  AA +AG D LV+C+TNGG LPWEV+  V  V+A    V LGIH HND G AVAN+L AVR+G   VQGT+NG GER GNANL TIIP LQLKMG+Q V  E L  LT LSRF AE  N+  DS AP+ G S+FAHKGGIHV+AV K  D+YQHIDP  VGN  R +VSELSG+ N+V +    G+          + R+   +VL  +K LE +G+TFE A+ASV+L++ R    Y PPF L+D++V T   +    GL        ++ATVKVR+              +  ++L  AEGNGPV+ALA AL +AL   +P L  V L+DYKVRILD +  T A TRVLI+FHD   +  W+TVG + NII AS  AL D +E+A++
Sbjct:   14 IYDTTLRDGTQGEEISLSCDDKLTLARRLDEFGVHYIEGGWPGSNPKDAEFFTRVRSLGLRQA--KVAAFGSTRRKHGRCEDDANLQALLDAETPVVTLVAKSWDYHVDAVLDTTREENLAMVRDSVAYMKARGREVFLDAEHFFDGYKANPAYALAVLLAAEEAGADALVLCETNGGALPWEVESVVAEVRAR-TRVPLGIHVHNDSGCAVANTLAAVRAGCTQVQGTLNGYGERVGNANLTTIIPNLQLKMGLQVVSAEQLRGLTTLSRFAAELANLKHDSHAPYVGASAFAHKGGIHVAAVLKAVDTYQHIDPERVGNETRAVVSELSGRGNLVYQARSRGL---------EINREDAQRVLHQIKRLEHEGFTFEAAEASVDLMLYRVSRDYTPPFELVDFMVLT--EQRHGRGL-------LSEATVKVRI--------------EGALKLTAAEGNGPVDALAHALSKALCDVYPELATVRLTDYKVRILDSDKGTAATTRVLIDFHD--GERGWTTVGASPNIIEASWRALSDSMEFALL 523          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTV2_ECTSI0.000e+078.33(R)-citramalate synthase n=1 Tax=Ectocarpus silicu... [more]
A0A836CCG4_9STRA3.700e-24760.40(R)-citramalate synthase n=1 Tax=Tribonema minus T... [more]
A0A7S2UWY3_9STRA3.800e-21758.06(R)-citramalate synthase n=1 Tax=Fibrocapsa japoni... [more]
A0A6V1Q1T2_HETAK7.040e-21354.26(R)-citramalate synthase n=1 Tax=Heterosigma akash... [more]
A0A1Z5JTT2_FISSO1.830e-18950.81(R)-citramalate synthase n=1 Tax=Fistulifera solar... [more]
R7QGZ5_CHOCR2.100e-18951.93(R)-citramalate synthase n=1 Tax=Chondrus crispus ... [more]
A0A2V3IHB1_9FLOR1.440e-18752.85(R)-citramalate synthase n=1 Tax=Gracilariopsis ch... [more]
A0A7C5E488_9CHLR4.250e-18253.56(R)-citramalate synthase n=1 Tax=Anaerolineae bact... [more]
A0A3M1GUB2_9CHLR5.960e-18151.19(R)-citramalate synthase (Fragment) n=1 Tax=Chloro... [more]
A0A369BWZ1_9GAMM1.620e-18053.38(R)-citramalate synthase n=1 Tax=Thioalbus denitri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0137092-isopropylmalate synthase LeuA, allosteric (dimerisation) domainSMARTSM00917LeuA_dimer_2coord: 469..636
e-value: 2.5E-23
score: 93.5
IPR0137092-isopropylmalate synthase LeuA, allosteric (dimerisation) domainPFAMPF08502LeuA_dimercoord: 470..635
e-value: 2.4E-20
score: 72.8
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 87..373
e-value: 5.0E-72
score: 244.8
IPR0362302-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamilyGENE3D3.30.160.270coord: 512..635
e-value: 1.7E-17
score: 65.5
IPR0362302-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamilySUPERFAMILY1109212-isopropylmalate synthase LeuA, allosteric (dimerisation) domaincoord: 544..632
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 90..344
e-value: 2.4E-49
score: 168.2
IPR000891Pyruvate carboxyltransferasePROSITEPS50991PYR_CTcoord: 90..357
score: 34.820393
IPR005675Citramalate synthaseTIGRFAMTIGR00977TIGR00977coord: 90..637
e-value: 3.4E-184
score: 611.0
IPR005675Citramalate synthasePANTHERPTHR43538ALPHA-IPM SYNTHASE/HOMOCITRATE SYNTHASEcoord: 88..644
NoneNo IPR availableGENE3D1.10.238.260coord: 374..481
e-value: 6.1E-17
score: 63.9
NoneNo IPR availablePIRSRPIRSR001594-3PIRSR001594-3coord: 242..343
e-value: 4.9E-8
score: 29.0
NoneNo IPR availableCDDcd07941DRE_TIM_LeuA3coord: 92..365
e-value: 1.20055E-169
score: 483.109
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 90..379
IPR002034Alpha-isopropylmalate/homocitrate synthase, conserved sitePROSITEPS00815AIPM_HOMOCIT_SYNTH_1coord: 97..113
IPR002034Alpha-isopropylmalate/homocitrate synthase, conserved sitePROSITEPS00816AIPM_HOMOCIT_SYNTH_2coord: 291..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:1765190..1789027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.116.1mRNA_A-nodosum_M_contig1.116.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1 1764110..1789441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1.116.1 ID=prot_A-nodosum_M_contig1.116.1|Name=mRNA_A-nodosum_M_contig1.116.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=655bp
MRLRITLLVTYQACLVGAFVHPVQHLGCSRPNSRAGGFRKTHIQVRVPRM
VSSTRTTSTSITPEVDGVQRQEVANSIHVNNKQSHAAKLVDLYDTTLRDG
TQMEGVSASVNDKLKITRELHNFGMHYIEGGWPGSNPKDVEFFERAKQEL
PKEAWGKVVAFGSTRRKYKTCEEDKQLESLISAGTSCVTIVAKAWDLHVD
HILEVPREENLAMVRESVAHLKMAGKEVMLDLEHFFDGLKANAQYTMQVC
KAAVDAGVDVLVMCDTNGGTLPWEVDESVQIVKAAYPDVRLGIHCHNDQG
LAVANSLQAVRSGVDVVQGTVNGIGERTGNANLVTIIPTLQLKMGMQGVG
EHLTNLTALSRFTAEQLNMALDSGAPFTGMSSFAHKGGIHVSAVNKIPDS
YQHIDPAHVGNTRRVLVSELSGQSNIVTKVEESGMASAAEMKASNVWRQR
LGQVLKTVKGLEKQGYTFEGADASVNLLVRRTMSGYVPPFNLMDYLVQTW
DSEPTSGGLEFRSDPTTAQATVKVRVPSGESTLAVSIEDEDPGVRLEVAE
GNGPVNALAKALFRALLPTFPTLLNVVLSDYKVRILDQESATRANTRVLI
EFHDKVSDVQWSTVGVNTNIISASMIALLDGLEYAVVEFGQSCSIEKGSE
AADD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0137092-isopropylmalate_synth_dimer
IPR013785Aldolase_TIM
IPR036230LeuA_allosteric_dom_sf
IPR000891PYR_CT
IPR005675Citramal_synthase
IPR002034AIPM/Hcit_synth_CS