mRNA_A-nodosum_M_contig996.14.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig996.14.2
Unique NamemRNA_A-nodosum_M_contig996.14.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: D8LRM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM8_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 3.140e-117
Identity = 167/223 (74.89%), Postives = 189/223 (84.75%), Query Frame = 2
Query:   92 YTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFG 760
            YTGHFAQT++AHP+D GV+I  VG+LLV G I D HQQHLLRGHDMEISAL VS  G+LIATGQ GST+ KGYP+PVFLWDY TRT L++ QGL+E VCHLSFSPD RFLLGCGGD LVYVWDTSTGELVTGKQYAE +TLGEW AV  +GRR +Y ICLC G D++ALEL FDP+RRQW +SGGPM TPS GLRR+Y C +LL GG FL+CGTDVGD+VVFG
Sbjct:   15 YTGHFAQTIIAHPEDKGVMIKSVGALLVTGSISDPHQQHLLRGHDMEISALTVSSSGALIATGQRGSTKVKGYPAPVFLWDYKTRTSLFVYQGLTECVCHLSFSPDARFLLGCGGDGLVYVWDTSTGELVTGKQYAEPSTLGEWTAVNLAGRRPVYEICLCTGNDVLALELRFDPSRRQWAISGGPMATPSSGLRRQYKCSALLPGGGFLLCGTDVGDMVVFG 237          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A835ZHC1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC1_9STRA)

HSP 1 Score: 332 bits (850), Expect = 2.380e-100
Identity = 171/340 (50.29%), Postives = 227/340 (66.76%), Query Frame = 2
Query:   65 MLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYI-LQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQY-----AESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLD-----GGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTD-HATGAVLCGGGNGVLRKIIGSDMVWQQERETK--LDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
            +LELEH+IGYTGH A+TV+AHP D+GV++T +GSLLVV ++ D H+Q LLRGHD EISALA S  G LIATGQ GSTR KG PSPV +W Y + T+  + L GL++GV  L+FSPD +FL G   D ++Y+WD +TGE+   + Y     A +    +W  V    RR  Y   LC+G D+VA + +FD  RRQW +   PM  P+ GL+R Y C ++       G  +L+CGT+VGDLVV+ V  +++RASIPV +GG+LS+ TD    G V CGGG+G +RK+ G+DM W+ + E    LDG VISL+  A G EL+A T+ GSVYRLL  DL+   V
Sbjct:   45 LLELEHVIGYTGHNARTVLAHPTDAGVLLTAMGSLLVVSLVSDPHRQELLRGHDEEISALASSPSGDLIATGQAGSTRAKGSPSPVIVWAYGSPTKARLKLAGLTQGVTLLAFSPDAQFLAGSANDGMLYIWDAATGEVAFCRPYVRRDGASALRFFQWCGVDAGARRRAYRALLCLGADVVAADFAFDAARRQWDVRTAPMAVPATGLQRTYLCSAVTTPETAAGASYLLCGTEVGDLVVYSVGPRVYRASIPVCAGGLLSLLTDAEEPGVVYCGGGDGSVRKLRGADMEWRLDCEAAPLLDGAVISLTADAEGAELIAATRAGSVYRLLRGDLTPVLV 384          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA)

HSP 1 Score: 317 bits (811), Expect = 2.100e-94
Identity = 157/331 (47.43%), Postives = 216/331 (65.26%), Query Frame = 2
Query:   50 AKGEGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
            A+GE +LELEHMIG+TG    T++AHP+ S V +  VGS +VVG + D H Q  LRGHDME++ALAVS  G+ IA+GQ G+T RKG+ +PV +WD+ TR  L  LQG +E V  L FSPD +FL  CG D L+ +WD  TGEL+ GK++ +   + +W  V Q GRR +Y I +    ++   +L FDP R+QW L G  M  P+ G+ R Y C S    G  L+ GT VGDL+VF + + ++RAS+PV SGG+ ++     T  + CGGG+G +RK+ G DM W  E E  LDG V S+S+++ G ELL GT+ G +YR+L+ DLS+  V
Sbjct:  101 AEGE-VLELEHMIGFTGKNLDTIIAHPRLSEVYVKSVGSAVVVGDLNDPHNQEFLRGHDMEVTALAVSATGAFIASGQAGTTHRKGFGAPVIVWDFETRRPLLTLQGHTEKVNILRFSPDEKFLAACGQDLLLQIWDLQTGELILGKKFKQVVAMFQWCDVNQKGRRNVYDIAIGSSNNVALDQLYFDPARQQWILDGTSMAMPTAGMTRDYLCSSRSADGDELLAGTSVGDLLVFKLTSHVYRASVPVCSGGLRAIVVCPTTFVIYCGGGDGTVRKLRGDDMRWTLEGEAALDGAVTSMSMVSNGTELLVGTESGRMYRMLVDDLSSQLV 430          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA)

HSP 1 Score: 311 bits (797), Expect = 5.420e-93
Identity = 151/331 (45.62%), Postives = 222/331 (67.07%), Query Frame = 2
Query:   56 GEGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWV-AVKQSG-RRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
            G+ ++ELEH++GYTGHF QT+  HP +  V +  +GS++V+G + D HQ   LRGHDME+S LA+S  G+LIA+GQ G+T  KGY +PV +W+ ATR +L+IL+G++  V  LSFSPD  F+ G G D L+Y+W+   GE+V GK+YA   ++ +W  A  ++G RR  Y + L +  ++    L+FDP+RRQW L   PM  P  GL R Y   +L +  +F +CGT VGDL VF    +++RAS+PVSSGG+ ++ T  ++  +LCG G+G ++K++GSD  WQ + E +LDG V S++  A   E++ GT  GSVYR+ +ADL+ T V
Sbjct:   25 GDDVMELEHVLGYTGHFLQTLACHPTEENVYVKSLGSIVVIGDLADPHQSSYLRGHDMEVSTLAISPSGNLIASGQMGTTHHKGYYAPVMIWEMATRRQLFILEGITGRVNSLSFSPDEAFVCGYGQDGLLYIWELQGGEVVFGKRYAAPVSIFQWCSAYNEAGNRRPKYQVILIIQSEVKVGTLAFDPSRRQWNLDLEPMNMPGSGLVRDYLVSALTEDRQFCMCGTAVGDLAVFRTSTRVYRASVPVSSGGLTALTTVGSS--LLCGAGDGTVKKLVGSDTQWQLQAEVQLDGRVTSIAPRASRQEVVVGTSRGSVYRVAVADLAATCV 353          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA)

HSP 1 Score: 311 bits (797), Expect = 8.800e-93
Identity = 150/325 (46.15%), Postives = 212/325 (65.23%), Query Frame = 2
Query:   59 EGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLST 1033
            E +LELEHMIG+TG   +T++AHP+     +  VGS +V+G + D HQQ  LRGHDMEI+ LA+S  GSL+A+GQ G+   KGY +PV +WD  T+  ++ L G +EGV  L FSPD +FL GCG D +V++WD  TGE+V GK+ A+  +L  W  +   GRR  Y + L    +    EL FDP+R+QW L    +  P+ G+ R Y C +    G  L+ G+ VGD++VF V ++++RAS+PV SGG+ ++  D  T  V CGGG+G +++++G DM W  E ET+L G V S+++LAGG ELL GT  G VYR+ L DLS+
Sbjct:   49 EEVLELEHMIGFTGKHHETILAHPRLPEGFVKAVGSAVVIGDVNDPHQQEFLRGHDMEITCLAISGTGSLLASGQLGTVHHKGYGAPVIVWDLNTKRAVFTLHGHTEGVDLLRFSPDEKFLCGCGRDCVVHIWDMQTGEVVYGKKLAKPVSLFHWCDMHARGRRTSYDLALSTAQETTMNELFFDPSRQQWMLEPKQLSLPTAGMVREYCCSARSADGDELLAGSTVGDMLVFKVSSRVYRASVPVCSGGVRALVVDKKTFQVYCGGGDGSIKRLVGDDMRWVMEAETRLRGAVTSMTMLAGGRELLVGTSVGHVYRVALEDLSS 373          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S3ZQS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQS9_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.300e-77
Identity = 152/359 (42.34%), Postives = 217/359 (60.45%), Query Frame = 2
Query:   56 GEGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVG--CDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLL---------DGGKFLVCGTDVGDLVVFGV-----DAKI--------FRASIPVSSGGMLSVCTDHATG-----AVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKVL 1045
            GEG L+LEH+IGYTG+  +T +A P         +GS+ V+G + D H+Q LLR HD  ISALA S+ GSL+A+GQ GSTR  GY + V +WD  T+T  + L+GL++ V  L FS D RFL   G D ++Y+WDT++GE+V GK+Y +  +L +WV  +  GRR +Y +   +    ++   ELSFD TR+QW L+  P+  P+ G+ R Y C +L          +  K+L+ GT  GDL+V  +     +A++        +RAS+PV SGGML++     T      AV  GGG+G++RKI G DM W+   + +LDG +I+LS + GG ELLAGT  G  YRLL  +L+   VL
Sbjct:   32 GEGPLDLEHVIGYTGNSPRTFLALPGGGSNFFKAMGSIAVIGDLTDPHKQKLLRAHDEPISALATSRDGSLLASGQLGSTRVPGYAALVVIWDTLTQTVAFRLRGLTQRVVILEFSDDMRFLAAAGEDCVLYIWDTASGEVVFGKRYIKQLSLFQWVGARDCGRRRVYRLATAMRGIAEVYHGELSFDATRQQWQLATVPVVMPAAGMARNYRCSTLATYAAEAPEEEPAKYLLAGTMEGDLLVLRLAGSRGEARLDTTRPGGAYRASVPVCSGGMLAMVLAPVTHGVDRPAVFAGGGDGIVRKITGYDMRWKLHSQAQLDGPIIALSCVDGGAELLAGTSNGQTYRLLADNLALPGVL 390          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S4DMK5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMK5_9EUKA)

HSP 1 Score: 244 bits (623), Expect = 1.210e-69
Identity = 125/317 (39.43%), Postives = 185/317 (58.36%), Query Frame = 2
Query:   68 LELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQ--SGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRL 1012
            LELEH+IG+TG +  TV  H Q++  ++  VG++LV   + D H+Q   RGHD  +S  AVS CG ++A+GQ  STR KG  +PV +W +  +  L    GL+  V  L+FSPD RFLLG G + ++YVWD  TGE+   ++  +  T   W  + +  S R   Y +  C    +    L F+    Q+ L   P + PS GL R YHC+ + + G+  + GT+VGDL+VF V + +FR  IP+SS G+ S+C D     V   GG+G ++K+ G D  W+   ETK+ G ++S+ + A G  L+AGT  GS+Y+L
Sbjct:   64 LELEHLIGFTGKYLNTVKYHSQENDAVVYTVGTVLVAADLADPHKQRFFRGHDANVSCFAVSPCGKMLASGQIASTRYKGQMAPVIVWGWGGKV-LGQFPGLTAAVVSLAFSPDSRFLLGSGANKMMYVWDLETGEVQVAQKVDKVITSATWGPMSRGKSRRHPTYSLITCPSPIVRYHILEFEAKSMQYVLKSYPCQFPSRGLTRTYHCVVMDEMGESAITGTEVGDLLVFNVRSTVFRTRIPISSNGISSICHDK-NNVVFVAGGDGTVKKLQGKDREWRILAETKIPGRIVSMDLSAKGDSLVAGTPHGSLYKL 378          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S1XWX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWX6_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.900e-69
Identity = 124/331 (37.46%), Postives = 189/331 (57.10%), Query Frame = 2
Query:   68 LELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHA-----TGAVLCGGGNGVLRKIIGSDMVWQQERE-TKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
            LELEH++G   +    +VAHP D+   +  + SL+++G + D H Q  LRGHDM ++ALA+S  G+LIA+GQ GS   KG+ +PV +WDY TR+ L+ L G +  V ++ FSPD RFL   G D L+YVWD  TGE+V  K++    ++  W AV    RR  Y    CV  ++ A   +FDP RRQW L G  +  P+    R YH  ++    ++++ G+ +G++ VF +D ++F A++P+ +GG+ ++  D +          CG G+G +R++ G DM W  +     L   + SLS  A    LLA T  G +Y L   DL+ T +
Sbjct:   22 LELEHIVGGANNSLGALVAHPIDNDAYVQAMNSLVLIGSLSDPHAQVCLRGHDMPVTALAISPTGALIASGQEGSIHHKGFHAPVVIWDYETRSPLFTLLGHTRRVANVRFSPDERFLCATGEDSLLYVWDVGTGEVVFAKRFNSPVSIFRWTAVVDGPRRPHYMASYCVKQEVFAATFAFDPVRRQWNLDGQLVACPNKA-ERTYHDAAVTMDARYMLAGSALGEMAVFRIDTRVFCATLPLCTGGLTAIAIDESDHLDENAVAFCGAGDGTVRRLRGRDMQWADDGALVTLPAAITSLSFTAQRNRLLATTAAGELYALDALDLAPTLI 351          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A1V9ZFW2_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFW2_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.810e-68
Identity = 122/326 (37.42%), Postives = 184/326 (56.44%), Query Frame = 2
Query:   65 MLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
            +LELEH+IGYTG    TV+AHP+D  V +T +G+ +V+  + D H Q  LR HD EI++L +S+ G L+A+GQ  ST+R G  + + +W+  T+  LY L G    +  ++FSPD  FLL  G D  V +WD  T E+V  + +    T+  W  V++  RR  Y +       L+  ELS+D    Q+ L   P   PS G+ R Y   ++      L+ GT  G+LVVF VDA++F+ +IP+SS G+ S+    A G +  G G+GVL+K++G+   W      +L G +  L +   G  +LAGT  G +YR+   DLS  ++
Sbjct:    8 LLELEHVIGYTGRAKDTVLAHPKDPDVYMTSMGAAVVISRVSDTHSQEFLRAHDEEITSLCISRSGLLLASGQLPSTKRNGTGAVIVVWELYTKAELYHLSGFFCKIAKMAFSPDDHFLLAAGHDGQVILWDLRTSEVVATRSFPSPVTVLNWGKVEEKTRRPKYTLTFAHSSQLIVSELSYDIASMQYKLESYPCSMPSTGMVREYLSAAMTQTNDTLLAGTFAGELVVFNVDARVFKCTIPISSNGVHSIVCCPAQGYLYVGAGDGVLKKLVGAQAEWNLVGHVQLIGAISGLCVSCDGATVLAGTAAGKIYRVHATDLSVEEL 333          
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S1UCE0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCE0_9STRA)

HSP 1 Score: 245 bits (625), Expect = 4.390e-68
Identity = 124/331 (37.46%), Postives = 189/331 (57.10%), Query Frame = 2
Query:   68 LELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHA-----TGAVLCGGGNGVLRKIIGSDMVWQQERE-TKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
            LELEH++G   +    +VAHP D+   +  + SL+++G + D H Q  LRGHDM ++ALA+S  G+LIA+GQ GS   KG+ +PV +WDY TR+ L+ L G +  V ++ FSPD RFL   G D L+YVWD  TGE+V  K++    ++  W AV    RR  Y    CV  ++ A   +FDP RRQW L G  +  P+    R YH  ++    ++++ G+ +G++ VF +D ++F A++P+ +GG+ ++  D +          CG G+G +R++ G DM W  +     L   + SLS  A    LLA T  G +Y L   DL+ T +
Sbjct:   22 LELEHIVGGANNSLGALVAHPIDNDAYVQAMNSLVLIGSLSDPHAQVCLRGHDMPVTALAISPTGALIASGQEGSIHHKGFHAPVVIWDYETRSPLFTLLGHTRRVANVRFSPDERFLCATGEDSLLYVWDVGTGEVVFAKRFNSPVSIFRWTAVVDGPRRPHYMASYCVKQEVFAATFAFDPVRRQWNLDGQLVACPNKA-ERTYHDAAVTMDARYMLAGSALGEMAVFRIDTRVFCATLPLCTGGLTAIAIDESDHLDENAVAFCGAGDGTVRRLRGRDMQWADDGALVTLPAAITSLSFTAQRNRLLATTAAGELYALDALDLAPTLI 351          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM8_ECTSI3.140e-11774.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHC1_9STRA2.380e-10050.29Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A7S2BHX7_9STRA2.100e-9447.43Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UWQ1_9STRA5.420e-9345.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SRF7_9STRA8.800e-9346.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZQS9_9STRA1.300e-7742.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4DMK5_9EUKA1.210e-6939.43Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S1XWX6_9STRA1.900e-6937.46Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1V9ZFW2_9STRA1.810e-6837.42ANAPC4_WD40 domain-containing protein n=1 Tax=Achl... [more]
A0A7S1UCE0_9STRA4.390e-6837.46Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig996contigA-nodosum_M_contig996:20460..24646 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRM8
PFAMsWD40
Model size2033
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue1.39e-122
EggNOG OGsKOG0266@1|root,KOG0266@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-12_000390.1
DescriptionWD repeat-containing protein
Cds size999
COG categoryB
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig996.14.2prot_A-nodosum_M_contig996.14.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig996 21430..24582 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870538.0133684-UTR-A-nodosum_M_contig996:20459..214291680870538.0133684-UTR-A-nodosum_M_contig996:20459..21429Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig996 20460..21429 -
1680870538.1496754-UTR-A-nodosum_M_contig996:24582..246461680870538.1496754-UTR-A-nodosum_M_contig996:24582..24646Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig996 24583..24646 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870538.0312543-CDS-A-nodosum_M_contig996:21429..216121680870538.0312543-CDS-A-nodosum_M_contig996:21429..21612Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 21430..21612 -
1680870538.0450137-CDS-A-nodosum_M_contig996:21828..219491680870538.0450137-CDS-A-nodosum_M_contig996:21828..21949Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 21829..21949 -
1680870538.0561733-CDS-A-nodosum_M_contig996:22131..222491680870538.0561733-CDS-A-nodosum_M_contig996:22131..22249Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 22132..22249 -
1680870538.0693405-CDS-A-nodosum_M_contig996:22520..225991680870538.0693405-CDS-A-nodosum_M_contig996:22520..22599Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 22521..22599 -
1680870538.0819836-CDS-A-nodosum_M_contig996:22981..231641680870538.0819836-CDS-A-nodosum_M_contig996:22981..23164Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 22982..23164 -
1680870538.0980492-CDS-A-nodosum_M_contig996:23397..234981680870538.0980492-CDS-A-nodosum_M_contig996:23397..23498Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 23398..23498 -
1680870538.1086721-CDS-A-nodosum_M_contig996:23616..237151680870538.1086721-CDS-A-nodosum_M_contig996:23616..23715Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 23617..23715 -
1680870538.1235287-CDS-A-nodosum_M_contig996:24137..242261680870538.1235287-CDS-A-nodosum_M_contig996:24137..24226Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 24138..24226 -
1680870538.1387866-CDS-A-nodosum_M_contig996:24556..245821680870538.1387866-CDS-A-nodosum_M_contig996:24556..24582Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig996 24557..24582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig996.14.2

>prot_A-nodosum_M_contig996.14.2 ID=prot_A-nodosum_M_contig996.14.2|Name=mRNA_A-nodosum_M_contig996.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=333bp
MLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLL
RGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYIL
QGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATL
GEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPS
VGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGML
SVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAG
GCELLAGTQEGSVYRLLLADLSTTKVLRLFDI*
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mRNA from alignment at A-nodosum_M_contig996:20460..24646-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig996.14.2 ID=mRNA_A-nodosum_M_contig996.14.2|Name=mRNA_A-nodosum_M_contig996.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4187bp|location=Sequence derived from alignment at A-nodosum_M_contig996:20460..24646- (Ascophyllum nodosum dioecious)
GAGCGGAGTGCTGAATGAAAATATAAGTGACGGGGGAAAGGAATACCAAG CCAAGGGAGAAGGCATGCTTGAGCTGGAGCATATGATCGGGTGAGGACCA AAGTTCCAACCCGAAGTTCGTAGGTCCATTTTTGTCAAGAATAGGTTAGT TTACAAGTGAAAAATATTGTTTCTTTCATTTAGACAGAATTAAATATGTT GTTTGTTTTTTTCACTTTTTGGTATGTTTTCCTTGCAATAGGCTAAAAAA TAGAACATTTCGTTTGTTATTTGAGTCAACAAGGATTTCGATGCCTCAGG GGTTCTGGGATGTTCAGGTAAGGACAGCGAACCCGAGAGACCACAATTTC ATAAAATTCATCTTCAATGTTTTGTTACTTGATGGAATCTGAGCATCATG GCTCAATGCGTCTCGGCTAGGTACACTGGCCATTTCGCACAGACCGTGGT TGCTCATCCCCAAGATAGCGGTGTGATAATCACCTGCGTGGGTTCCCTTT TGGTCGTTGGTGAGTGGCCTCTAGTCGGTCTGAGTTGCAGGTTGATTCTC AGACGCTGGGGAGCTTTGTGTCGCATCCATAAAGCACCGTTGAAGCGCGA GAAGGGGTGAATTTGGATGGACACTTAAAACCCCGATTGATAGGATTAGT CACTCTGGCCAACATCAACAGCCATAAAGCCCCTCTTATGAATAATATGT TGTCCGATGCGCTCATCATGGCATACGAGCGGCGAGATGGAAGATAGTAA TTCGTCGTCTGGACATCGTGGGGTTATGAACAATGTATTCGCGTTATTAT CAAAAGAAGACGTGTGGCCCAACGCACTATGTTGACCCCTACCAACGCTT CATGCTGGTGCAATCCATAACCATCCTCTGACGAAACCTTTACATCTCGA TAATGAAGATATCGTTTCACGTGATGACCAGGGGTAATCGGAGATCATCA CCAGCAGCATCTGCTTCGAGGCCACGACATGGAGATAAGCGCTTTAGCCG TGTCTCAGTGCGGGTCCCTGATAGCTACAGGTATGTCTTACGGCGTTGTG GTGTTCTACCTTGGATCGCGCCACCGAAAATCTCGACCAGACAAGACCCC AGCGGTAGAAATCCTTCACCCAGTGACTATCGCTCTTGATTTTTGAAGGT CAGTGCGGGTCGACGCGGCGAAAAGGCTACCCCTCTCCGGTTTTTTTGTG GGACTACGCAACGCGAACGAGATTATACATACTTCAAGGCTTGTCGGAGG TGAAGGCATTGTTGAACTGAGGCTGCAGGGCGTGTTTGCTCCTCCATGCT TCGCGCTTGGATATATCTAAGCTTACCCGCTTGCCTAAATAAATAAGATT GGTTCTTGAATTACCTTGAACTATGATATTTAGCCAGGAAAAGTGAGACG CATCAAGTTCCCGGGATTGCGTCTCTTCCGCTCCTCTCAGTGAGTATGTC ATTCTCCAATAATGGCCTCCTCGTCTGTCCAGGGCGTTTGTCACCTGTCG TTCAGTCCCGACCACAGGTTCCTCCTCGGTTGCGGTGGAGACCACCTAGT GTACGTTTGGGACACCAGCACGGGGGAACTTGTCACCGGAAAGCAGTACG CTGAGTCTGCTACGCTTGGAGAATGGGTAGCGGTCAAACAGTCGGGTAGA AGAGCCATGTACCACGTGAGGTTGATTCGTTAACCCTTCCCAGGGTCGGG GCTGACCGGCCGCGATAGATGGTGTGACGATTTTTCTACGTATCCTTGCA CTAGGGCTCTATGCGAGCCCCCAATAACGTCGTGTCGGCATATGACCGGA AAATGACCAAGCTTTGTGGTTTGGCCCTCACTCACACTTTGTACTTATCC CGGACGCTTTCAGGGTGCTAGCCTCAAGCGTATAATATGTATTTTTTTAT ACCAGCCACGCTCCAAGAGAACATTCAGTTGTTGTACGTGAGTCTCATAT TCTGTTTTGTGAAGTGTTCGAAGGGCCGTCTCAAGTGAACGATCTCATTG GTGTTGCCTGCACATTATCCGACCCTCGCACCGCTTTGCACGTGCAGATT TGCTTGTGCGTTGGATGTGACCTCGTCGCCTTGGAGCTTAGTTTTGATCC CACCCGACGTCAGTGGACCTTGTCAGGTACTATTCCAAACACGAACGGCG CATTTTTAATGCACTGTCAATTCAGGGGCCTGAGTTTTCAGGGACTACAA TCGGTGTGGAAGAAATACGATCCGCTGCAAGGATATTAAAGCCAAGGTTC ACGTCTATCGCACAATGTACTTTTATTCGATCGAGCCCATCGCTTCCTTC GGGTTGGACTACATGGTTAGGCGTAACAGCTTGTTGCAAGAGTCTTTTAT GTAGAACCATCGCTCAAATACCCTGAGCGGTTCGCTAACTTTTGCAGGAG GGCCGATGAGGACACCGAGCGTGGGACTCCGTCGCCGCTACCACTGCTTA TCTCTTCTTGATGGGGGGAAATTTCTCGTCTGTGGCACTGACGTGGGCGA CCTTGTGGTATTCGGGTAGGTAAATTAAAGGATACGGTGTAACTTGCGTC GTTTCTCTTATCCCATCTCGTTTTGTTTTATTTTGCGGGACAAACGTTAT GCTTGTGCGACGATGGGTGCCTGAGAGCATTCGATTACGCACTACTAGCG TTTCGCTCGAATTTTCCGATCAATCGTAATAATATTTCCTATCACAGGGT CGACGCGAAGATTTTCCGCGCAAGTATACCGGTATCTTCGGGTGGGATGC TCTCTGTATGCACCGACCATGCCACCGGCGCGGTGTTGTGTGGCGGTGGC AATGGCGTACTTCGAAAGGTATCTAAAATCCGTACCATCGACATCCAACT TGCGGCCGTTACAGGTACTAAGAGCATTTAGGGGTTTAGGTGCGTGGATT ATATAGCAGCAATGTCCTTTAGTCTAGCCTTATTACTCAGCAAGAAGCTT TTTGCTCTTGCGCTACTGATAGTGTGAGCTAAGAGAGTCATTTACGCCGT TTGGCCCTCGTTGTTCTTATCGGCCAACTAACAGATAATAGGTTCTGACA TGGTTTGGCAGCAGGAGAGGGAGACCAAGCTAGATGGCGGGGTGATTTCA CTAAGCATACTAGCAGGTGGCTGTGAACTGCTCGCGGGAACCCAGGAGGG CTCCGTGTACCGCCTTCTACTCGCCGACCTCTCTACGACAAAGGTACTGA GACTCTTCGATATATAGACAGCACAGGGAAGCTCATCCATCGGTTTCCCT ACAAGCTCAGTTTTCCAGCTGCTTGTGGACACTACAAAACCTTCGATCCT AACTTCGCTGAAAGTATTATTTCTTCGTTATAAAGGGACAGGCTTGAAAA TATCTATAATGGTGGAACTCCCTTTCCTTCGGGTTGCCCACTAATGTAGT GGAATGTCTCTGGGAGGATTGGTCTAATACGGGAGAGTGAAGCTTTGCGA GGGGTTGGTACCGCAGGCTCGAGATGATCACATGTAACAGACGAATGTAA AGCCGGTATATCATTATCTCATGTGGCGCCCCAAATTTCCATGGGTAACA CCTGGCTAAATAGAGAGACAAACAGAAAGCAATGGTACCTCAAAGCTAAC TGAACCGGTGGGACTCTACACTATAGAAAGACGGGGATCACTAAACACGT CCCCTGTGAATAGACCTACTCTAATGCTGATGTCACTCCCTCATCAGTGT ATATCACCCGCACGTTACCAATCACTGACTGAGTAACGCTCTTCATCCTG CCTTTAGTCAATAATTTTTTAACGTCTAAATTTCACCAAATATCCAGACT CTCCGCTTTTTAGAATGCATCTCTCAAAGCTATCATACTGACCCTTCAAA AAAACATGTTATACTTTTGTTATCGGTGAATATTTTAGTCCAGGCATCAT GTGCTTTTAAACAATTGGCAGTTGAAATGTCATCAAAAACTACTCGTCGA TATGCCACAGCGAAATTGCTCTTCTTGCAGACTAAAATAATAATCCCCTA CCTAGGTACACAAAATTTTGCATTGAAGTTGGCATAAAATACTCGGTAAG TTATCTCTGTAAAACCCGACGACTTGATCGAACAGCTCAGTATTTTTGCA TACGAAAAATCGACACGTGTTTTGAATCAATTAAATTCCAAAAATCGAAA GACGAATATCTCGTCCTAGAGTTCTCTAGAAAACCAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig996:20460..24646-

>mRNA_A-nodosum_M_contig996.14.2 ID=mRNA_A-nodosum_M_contig996.14.2|Name=mRNA_A-nodosum_M_contig996.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=999bp|location=Sequence derived from alignment at A-nodosum_M_contig996:20460..24646- (Ascophyllum nodosum dioecious)
ATGCTTGAGCTGGAGCATATGATCGGGTACACTGGCCATTTCGCACAGAC
CGTGGTTGCTCATCCCCAAGATAGCGGTGTGATAATCACCTGCGTGGGTT
CCCTTTTGGTCGTTGGGGTAATCGGAGATCATCACCAGCAGCATCTGCTT
CGAGGCCACGACATGGAGATAAGCGCTTTAGCCGTGTCTCAGTGCGGGTC
CCTGATAGCTACAGGTCAGTGCGGGTCGACGCGGCGAAAAGGCTACCCCT
CTCCGGTTTTTTTGTGGGACTACGCAACGCGAACGAGATTATACATACTT
CAAGGCTTGTCGGAGGGCGTTTGTCACCTGTCGTTCAGTCCCGACCACAG
GTTCCTCCTCGGTTGCGGTGGAGACCACCTAGTGTACGTTTGGGACACCA
GCACGGGGGAACTTGTCACCGGAAAGCAGTACGCTGAGTCTGCTACGCTT
GGAGAATGGGTAGCGGTCAAACAGTCGGGTAGAAGAGCCATGTACCACAT
TTGCTTGTGCGTTGGATGTGACCTCGTCGCCTTGGAGCTTAGTTTTGATC
CCACCCGACGTCAGTGGACCTTGTCAGGAGGGCCGATGAGGACACCGAGC
GTGGGACTCCGTCGCCGCTACCACTGCTTATCTCTTCTTGATGGGGGGAA
ATTTCTCGTCTGTGGCACTGACGTGGGCGACCTTGTGGTATTCGGGGTCG
ACGCGAAGATTTTCCGCGCAAGTATACCGGTATCTTCGGGTGGGATGCTC
TCTGTATGCACCGACCATGCCACCGGCGCGGTGTTGTGTGGCGGTGGCAA
TGGCGTACTTCGAAAGATAATAGGTTCTGACATGGTTTGGCAGCAGGAGA
GGGAGACCAAGCTAGATGGCGGGGTGATTTCACTAAGCATACTAGCAGGT
GGCTGTGAACTGCTCGCGGGAACCCAGGAGGGCTCCGTGTACCGCCTTCT
ACTCGCCGACCTCTCTACGACAAAGGTACTGAGACTCTTCGATATATAG
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