mRNA_A-nodosum_M_contig996.14.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: D8LRM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM8_ECTSI) HSP 1 Score: 360 bits (923), Expect = 3.140e-117 Identity = 167/223 (74.89%), Postives = 189/223 (84.75%), Query Frame = 2
Query: 92 YTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFG 760
YTGHFAQT++AHP+D GV+I VG+LLV G I D HQQHLLRGHDMEISAL VS G+LIATGQ GST+ KGYP+PVFLWDY TRT L++ QGL+E VCHLSFSPD RFLLGCGGD LVYVWDTSTGELVTGKQYAE +TLGEW AV +GRR +Y ICLC G D++ALEL FDP+RRQW +SGGPM TPS GLRR+Y C +LL GG FL+CGTDVGD+VVFG
Sbjct: 15 YTGHFAQTIIAHPEDKGVMIKSVGALLVTGSISDPHQQHLLRGHDMEISALTVSSSGALIATGQRGSTKVKGYPAPVFLWDYKTRTSLFVYQGLTECVCHLSFSPDARFLLGCGGDGLVYVWDTSTGELVTGKQYAEPSTLGEWTAVNLAGRRPVYEICLCTGNDVLALELRFDPSRRQWAISGGPMATPSSGLRRQYKCSALLPGGGFLLCGTDVGDMVVFG 237
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A835ZHC1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC1_9STRA) HSP 1 Score: 332 bits (850), Expect = 2.380e-100 Identity = 171/340 (50.29%), Postives = 227/340 (66.76%), Query Frame = 2
Query: 65 MLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYI-LQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQY-----AESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLD-----GGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTD-HATGAVLCGGGNGVLRKIIGSDMVWQQERETK--LDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
+LELEH+IGYTGH A+TV+AHP D+GV++T +GSLLVV ++ D H+Q LLRGHD EISALA S G LIATGQ GSTR KG PSPV +W Y + T+ + L GL++GV L+FSPD +FL G D ++Y+WD +TGE+ + Y A + +W V RR Y LC+G D+VA + +FD RRQW + PM P+ GL+R Y C ++ G +L+CGT+VGDLVV+ V +++RASIPV +GG+LS+ TD G V CGGG+G +RK+ G+DM W+ + E LDG VISL+ A G EL+A T+ GSVYRLL DL+ V
Sbjct: 45 LLELEHVIGYTGHNARTVLAHPTDAGVLLTAMGSLLVVSLVSDPHRQELLRGHDEEISALASSPSGDLIATGQAGSTRAKGSPSPVIVWAYGSPTKARLKLAGLTQGVTLLAFSPDAQFLAGSANDGMLYIWDAATGEVAFCRPYVRRDGASALRFFQWCGVDAGARRRAYRALLCLGADVVAADFAFDAARRQWDVRTAPMAVPATGLQRTYLCSAVTTPETAAGASYLLCGTEVGDLVVYSVGPRVYRASIPVCAGGLLSLLTDAEEPGVVYCGGGDGSVRKLRGADMEWRLDCEAAPLLDGAVISLTADAEGAELIAATRAGSVYRLLRGDLTPVLV 384
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA) HSP 1 Score: 317 bits (811), Expect = 2.100e-94 Identity = 157/331 (47.43%), Postives = 216/331 (65.26%), Query Frame = 2
Query: 50 AKGEGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
A+GE +LELEHMIG+TG T++AHP+ S V + VGS +VVG + D H Q LRGHDME++ALAVS G+ IA+GQ G+T RKG+ +PV +WD+ TR L LQG +E V L FSPD +FL CG D L+ +WD TGEL+ GK++ + + +W V Q GRR +Y I + ++ +L FDP R+QW L G M P+ G+ R Y C S G L+ GT VGDL+VF + + ++RAS+PV SGG+ ++ T + CGGG+G +RK+ G DM W E E LDG V S+S+++ G ELL GT+ G +YR+L+ DLS+ V
Sbjct: 101 AEGE-VLELEHMIGFTGKNLDTIIAHPRLSEVYVKSVGSAVVVGDLNDPHNQEFLRGHDMEVTALAVSATGAFIASGQAGTTHRKGFGAPVIVWDFETRRPLLTLQGHTEKVNILRFSPDEKFLAACGQDLLLQIWDLQTGELILGKKFKQVVAMFQWCDVNQKGRRNVYDIAIGSSNNVALDQLYFDPARQQWILDGTSMAMPTAGMTRDYLCSSRSADGDELLAGTSVGDLLVFKLTSHVYRASVPVCSGGLRAIVVCPTTFVIYCGGGDGTVRKLRGDDMRWTLEGEAALDGAVTSMSMVSNGTELLVGTESGRMYRMLVDDLSSQLV 430
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA) HSP 1 Score: 311 bits (797), Expect = 5.420e-93 Identity = 151/331 (45.62%), Postives = 222/331 (67.07%), Query Frame = 2
Query: 56 GEGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWV-AVKQSG-RRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
G+ ++ELEH++GYTGHF QT+ HP + V + +GS++V+G + D HQ LRGHDME+S LA+S G+LIA+GQ G+T KGY +PV +W+ ATR +L+IL+G++ V LSFSPD F+ G G D L+Y+W+ GE+V GK+YA ++ +W A ++G RR Y + L + ++ L+FDP+RRQW L PM P GL R Y +L + +F +CGT VGDL VF +++RAS+PVSSGG+ ++ T ++ +LCG G+G ++K++GSD WQ + E +LDG V S++ A E++ GT GSVYR+ +ADL+ T V
Sbjct: 25 GDDVMELEHVLGYTGHFLQTLACHPTEENVYVKSLGSIVVIGDLADPHQSSYLRGHDMEVSTLAISPSGNLIASGQMGTTHHKGYYAPVMIWEMATRRQLFILEGITGRVNSLSFSPDEAFVCGYGQDGLLYIWELQGGEVVFGKRYAAPVSIFQWCSAYNEAGNRRPKYQVILIIQSEVKVGTLAFDPSRRQWNLDLEPMNMPGSGLVRDYLVSALTEDRQFCMCGTAVGDLAVFRTSTRVYRASVPVSSGGLTALTTVGSS--LLCGAGDGTVKKLVGSDTQWQLQAEVQLDGRVTSIAPRASRQEVVVGTSRGSVYRVAVADLAATCV 353
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA) HSP 1 Score: 311 bits (797), Expect = 8.800e-93 Identity = 150/325 (46.15%), Postives = 212/325 (65.23%), Query Frame = 2
Query: 59 EGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLST 1033
E +LELEHMIG+TG +T++AHP+ + VGS +V+G + D HQQ LRGHDMEI+ LA+S GSL+A+GQ G+ KGY +PV +WD T+ ++ L G +EGV L FSPD +FL GCG D +V++WD TGE+V GK+ A+ +L W + GRR Y + L + EL FDP+R+QW L + P+ G+ R Y C + G L+ G+ VGD++VF V ++++RAS+PV SGG+ ++ D T V CGGG+G +++++G DM W E ET+L G V S+++LAGG ELL GT G VYR+ L DLS+
Sbjct: 49 EEVLELEHMIGFTGKHHETILAHPRLPEGFVKAVGSAVVIGDVNDPHQQEFLRGHDMEITCLAISGTGSLLASGQLGTVHHKGYGAPVIVWDLNTKRAVFTLHGHTEGVDLLRFSPDEKFLCGCGRDCVVHIWDMQTGEVVYGKKLAKPVSLFHWCDMHARGRRTSYDLALSTAQETTMNELFFDPSRQQWMLEPKQLSLPTAGMVREYCCSARSADGDELLAGSTVGDMLVFKVSSRVYRASVPVCSGGVRALVVDKKTFQVYCGGGDGSIKRLVGDDMRWVMEAETRLRGAVTSMTMLAGGRELLVGTSVGHVYRVALEDLSS 373
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S3ZQS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQS9_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.300e-77 Identity = 152/359 (42.34%), Postives = 217/359 (60.45%), Query Frame = 2
Query: 56 GEGMLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVG--CDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLL---------DGGKFLVCGTDVGDLVVFGV-----DAKI--------FRASIPVSSGGMLSVCTDHATG-----AVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKVL 1045
GEG L+LEH+IGYTG+ +T +A P +GS+ V+G + D H+Q LLR HD ISALA S+ GSL+A+GQ GSTR GY + V +WD T+T + L+GL++ V L FS D RFL G D ++Y+WDT++GE+V GK+Y + +L +WV + GRR +Y + + ++ ELSFD TR+QW L+ P+ P+ G+ R Y C +L + K+L+ GT GDL+V + +A++ +RAS+PV SGGML++ T AV GGG+G++RKI G DM W+ + +LDG +I+LS + GG ELLAGT G YRLL +L+ VL
Sbjct: 32 GEGPLDLEHVIGYTGNSPRTFLALPGGGSNFFKAMGSIAVIGDLTDPHKQKLLRAHDEPISALATSRDGSLLASGQLGSTRVPGYAALVVIWDTLTQTVAFRLRGLTQRVVILEFSDDMRFLAAAGEDCVLYIWDTASGEVVFGKRYIKQLSLFQWVGARDCGRRRVYRLATAMRGIAEVYHGELSFDATRQQWQLATVPVVMPAAGMARNYRCSTLATYAAEAPEEEPAKYLLAGTMEGDLLVLRLAGSRGEARLDTTRPGGAYRASVPVCSGGMLAMVLAPVTHGVDRPAVFAGGGDGIVRKITGYDMRWKLHSQAQLDGPIIALSCVDGGAELLAGTSNGQTYRLLADNLALPGVL 390
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S4DMK5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMK5_9EUKA) HSP 1 Score: 244 bits (623), Expect = 1.210e-69 Identity = 125/317 (39.43%), Postives = 185/317 (58.36%), Query Frame = 2
Query: 68 LELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQ--SGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRL 1012
LELEH+IG+TG + TV H Q++ ++ VG++LV + D H+Q RGHD +S AVS CG ++A+GQ STR KG +PV +W + + L GL+ V L+FSPD RFLLG G + ++YVWD TGE+ ++ + T W + + S R Y + C + L F+ Q+ L P + PS GL R YHC+ + + G+ + GT+VGDL+VF V + +FR IP+SS G+ S+C D V GG+G ++K+ G D W+ ETK+ G ++S+ + A G L+AGT GS+Y+L
Sbjct: 64 LELEHLIGFTGKYLNTVKYHSQENDAVVYTVGTVLVAADLADPHKQRFFRGHDANVSCFAVSPCGKMLASGQIASTRYKGQMAPVIVWGWGGKV-LGQFPGLTAAVVSLAFSPDSRFLLGSGANKMMYVWDLETGEVQVAQKVDKVITSATWGPMSRGKSRRHPTYSLITCPSPIVRYHILEFEAKSMQYVLKSYPCQFPSRGLTRTYHCVVMDEMGESAITGTEVGDLLVFNVRSTVFRTRIPISSNGISSICHDK-NNVVFVAGGDGTVKKLQGKDREWRILAETKIPGRIVSMDLSAKGDSLVAGTPHGSLYKL 378
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S1XWX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWX6_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.900e-69 Identity = 124/331 (37.46%), Postives = 189/331 (57.10%), Query Frame = 2
Query: 68 LELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHA-----TGAVLCGGGNGVLRKIIGSDMVWQQERE-TKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
LELEH++G + +VAHP D+ + + SL+++G + D H Q LRGHDM ++ALA+S G+LIA+GQ GS KG+ +PV +WDY TR+ L+ L G + V ++ FSPD RFL G D L+YVWD TGE+V K++ ++ W AV RR Y CV ++ A +FDP RRQW L G + P+ R YH ++ ++++ G+ +G++ VF +D ++F A++P+ +GG+ ++ D + CG G+G +R++ G DM W + L + SLS A LLA T G +Y L DL+ T +
Sbjct: 22 LELEHIVGGANNSLGALVAHPIDNDAYVQAMNSLVLIGSLSDPHAQVCLRGHDMPVTALAISPTGALIASGQEGSIHHKGFHAPVVIWDYETRSPLFTLLGHTRRVANVRFSPDERFLCATGEDSLLYVWDVGTGEVVFAKRFNSPVSIFRWTAVVDGPRRPHYMASYCVKQEVFAATFAFDPVRRQWNLDGQLVACPNKA-ERTYHDAAVTMDARYMLAGSALGEMAVFRIDTRVFCATLPLCTGGLTAIAIDESDHLDENAVAFCGAGDGTVRRLRGRDMQWADDGALVTLPAAITSLSFTAQRNRLLATTAAGELYALDALDLAPTLI 351
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A1V9ZFW2_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFW2_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.810e-68 Identity = 122/326 (37.42%), Postives = 184/326 (56.44%), Query Frame = 2
Query: 65 MLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHATGAVLCGGGNGVLRKIIGSDMVWQQERETKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
+LELEH+IGYTG TV+AHP+D V +T +G+ +V+ + D H Q LR HD EI++L +S+ G L+A+GQ ST+R G + + +W+ T+ LY L G + ++FSPD FLL G D V +WD T E+V + + T+ W V++ RR Y + L+ ELS+D Q+ L P PS G+ R Y ++ L+ GT G+LVVF VDA++F+ +IP+SS G+ S+ A G + G G+GVL+K++G+ W +L G + L + G +LAGT G +YR+ DLS ++
Sbjct: 8 LLELEHVIGYTGRAKDTVLAHPKDPDVYMTSMGAAVVISRVSDTHSQEFLRAHDEEITSLCISRSGLLLASGQLPSTKRNGTGAVIVVWELYTKAELYHLSGFFCKIAKMAFSPDDHFLLAAGHDGQVILWDLRTSEVVATRSFPSPVTVLNWGKVEEKTRRPKYTLTFAHSSQLIVSELSYDIASMQYKLESYPCSMPSTGMVREYLSAAMTQTNDTLLAGTFAGELVVFNVDARVFKCTIPISSNGVHSIVCCPAQGYLYVGAGDGVLKKLVGAQAEWNLVGHVQLIGAISGLCVSCDGATVLAGTAAGKIYRVHATDLSVEEL 333
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Match: A0A7S1UCE0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCE0_9STRA) HSP 1 Score: 245 bits (625), Expect = 4.390e-68 Identity = 124/331 (37.46%), Postives = 189/331 (57.10%), Query Frame = 2
Query: 68 LELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLRGHDMEISALAVSQCGSLIATGQCGSTRRKGYPSPVFLWDYATRTRLYILQGLSEGVCHLSFSPDHRFLLGCGGDHLVYVWDTSTGELVTGKQYAESATLGEWVAVKQSGRRAMYHICLCVGCDLVALELSFDPTRRQWTLSGGPMRTPSVGLRRRYHCLSLLDGGKFLVCGTDVGDLVVFGVDAKIFRASIPVSSGGMLSVCTDHA-----TGAVLCGGGNGVLRKIIGSDMVWQQERE-TKLDGGVISLSILAGGCELLAGTQEGSVYRLLLADLSTTKV 1042
LELEH++G + +VAHP D+ + + SL+++G + D H Q LRGHDM ++ALA+S G+LIA+GQ GS KG+ +PV +WDY TR+ L+ L G + V ++ FSPD RFL G D L+YVWD TGE+V K++ ++ W AV RR Y CV ++ A +FDP RRQW L G + P+ R YH ++ ++++ G+ +G++ VF +D ++F A++P+ +GG+ ++ D + CG G+G +R++ G DM W + L + SLS A LLA T G +Y L DL+ T +
Sbjct: 22 LELEHIVGGANNSLGALVAHPIDNDAYVQAMNSLVLIGSLSDPHAQVCLRGHDMPVTALAISPTGALIASGQEGSIHHKGFHAPVVIWDYETRSPLFTLLGHTRRVANVRFSPDERFLCATGEDSLLYVWDVGTGEVVFAKRFNSPVSIFRWTAVVDGPRRPHYMASYCVKQEVFAATFAFDPVRRQWNLDGQLVACPNKA-ERTYHDAAVTMDARYMLAGSALGEMAVFRIDTRVFCATLPLCTGGLTAIAIDESDHLDENAVAFCGAGDGTVRRLRGRDMQWADDGALVTLPAAITSLSFTAQRNRLLATTAAGELYALDALDLAPTLI 351 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig996.14.2 >prot_A-nodosum_M_contig996.14.2 ID=prot_A-nodosum_M_contig996.14.2|Name=mRNA_A-nodosum_M_contig996.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=333bp MLELEHMIGYTGHFAQTVVAHPQDSGVIITCVGSLLVVGVIGDHHQQHLLback to top mRNA from alignment at A-nodosum_M_contig996:20460..24646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig996.14.2 ID=mRNA_A-nodosum_M_contig996.14.2|Name=mRNA_A-nodosum_M_contig996.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4187bp|location=Sequence derived from alignment at A-nodosum_M_contig996:20460..24646- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig996:20460..24646- >mRNA_A-nodosum_M_contig996.14.2 ID=mRNA_A-nodosum_M_contig996.14.2|Name=mRNA_A-nodosum_M_contig996.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=999bp|location=Sequence derived from alignment at A-nodosum_M_contig996:20460..24646- (Ascophyllum nodosum dioecious)back to top |