mRNA_A-nodosum_M_contig992.21.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5JSX7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX7_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 4.130e-18 Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 364 KEEHGKGKLKFHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRK 672
K + KG+L+ LE P F IP+FGGG +R+RYP KFK+DAV YS++ V+G +GP G++G++YA++ LGIRD S++ W ++ EA L ++ KG +K
Sbjct: 25 KNKRKKGQLE--LEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAALAKMDTYKGGAKRKK 125
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5JVS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS4_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 9.080e-17 Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 364 KEEHGKGKLKFHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRK 672
K + KG+L+ LE P F IP+FGGG +R+RYP KFK+DAV YS++ V+G +GP G++G++YA++ LGIRD S++ W ++ EA L ++ KG +K
Sbjct: 249 KNKRKKGQLE--LEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAALAKMDTYKGGAKRKK 349
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5JJ80_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ80_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-16 Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 364 KEEHGKGKLKFHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRK 672
K + KG+L+ LE P F IP+FGGG +R+RYP KFK+DAV YS++ V+G +GP G++G++YA++ LGIRD S++ W ++ EA L ++ KG +K
Sbjct: 219 KNKRKKGQLE--LEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAALAKMDTYKGGAKRKK 319
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5JA43_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA43_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.130e-16 Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 364 KEEHGKGKLKFHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRK 672
K + KG+L+ LE P F IP+FGGG +R+RYP KFK+DAV YS++ V+G +GP G++G++YA++ LGIRD S++ W ++ EA L ++ KG +K
Sbjct: 249 KNKRKKGQLE--LEPPGFPIPEFGGGSQRKRYPLKFKVDAVRYSQRRVKGAQGPDGTVGITYASRVLGIRDKSTLALWVKEIDKYEAALAKMDTYKGGAKRKK 349
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5K8J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J2_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.210e-16 Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 379 KGKLK---FHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRKRKEGKVSSRKRPRAAHVKDALSLGRPRTQGRTREA 777
KGK K LE PDFEIP+FGGG +R+RYP +FK++AV YS+K V+G +GPGG++G+SYAT+ L I D +++ W + EA L A +G GK K + A + +L+ GR RT +A
Sbjct: 140 KGKRKKGQLELEPPDFEIPNFGGGSQRKRYPLQFKVNAVRYSQKRVKGAQGPGGTVGISYATRVLNIPDKATLAEWVRKVPEYEAAL----AAEG---------GKFKGLKSKKNAKNRMSLNTGRVRTNREAEQA 262
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5J6V1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6V1_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 2.380e-16 Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 379 KGKLK---FHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRKRKEGKVSSRKRPRAAHVKDALSLGRPRTQGRTREA 777
KGK K LE PDFEIP+FGGG +R+RYP +FK++AV YS+K V+G +GPGG++G+SYAT+ L I D +++ W + EA L A +G GK K + A + +L+ GR RT +A
Sbjct: 140 KGKRKKGQLELEPPDFEIPNFGGGSQRKRYPLQFKVNAVRYSQKRVKGAQGPGGTVGISYATRVLNIPDKATLAEWVRKVPEYEAAL----AAEG---------GKFKGLKSKKNAKNRMSLNTGRVRTNREAEQA 262
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5K0R7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0R7_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 1.280e-14 Identity = 46/122 (37.70%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 328 HDATPQRGTKRKKEEHGKGKLKFHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRKRKEGKVS 693
H TP + ++K KG+L+ LE P+F IP+ GGG +R+RYP KFK+DAV YS++ ++G +GP G++G+ YAT+ L I D +++ W ++ +A L + KG +K+ ++S
Sbjct: 188 HVGTPAQNRSKRK----KGQLE--LEPPNFPIPELGGGSQRKRYPLKFKVDAVRYSQRKIKGAQGPNGTVGIIYATRILKIPDKATLAAWFKNVAEYDAALAEADTYKGGAKRKKKANNRLS 303
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5KQE0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE0_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.400e-14 Identity = 44/105 (41.90%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 379 KGKLKFHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRKRKEGKVS 693
KG+L+ LE PDF IP+ GGG +R+ +P KFK+DAV YS+K ++G +GPGG++G+SYA++ L I + +++ W +D EA L + KG +K+ ++S
Sbjct: 30 KGQLE--LEPPDFAIPELGGGRQRKHHPLKFKVDAVRYSQKRLKGAQGPGGTVGISYASRILNIPNKATLAAWVRDVAKYEAALAKQDTYKGGGKRKKKANNRLS 132
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5JEJ4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ4_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 1.420e-14 Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 379 KGKLK---FHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRKRKEGKVSSRKRPRAAHVKDALSLGRPRT 756
KGK K LESPDF IPD GGG +R+RY +FK++AV YS++ ++G +GPGG++GV+YA++ L I D +++ W +D EA L+ E K V RK+ + ++S L++GR RT
Sbjct: 220 KGKRKKGRLELESPDFPIPDHGGGTQRKRYTLQFKVNAVRYSQRKLKGAQGPGGTVGVTYASRILKIPDKATLAAWVKDVDKYEA-ALAEETKYSRVKGRKKAKHRMS-------------LNVGRTRT 334
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Match: A0A6H5KPB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB6_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.610e-14 Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 379 KGKLK---FHLESPDFEIPDFGGGVRRRRYPTKFKLDAVAYSEKVVEGGKGPGGSIGVSYATKRLGIRDCSSIVRWKQDRRNLEAELLSVEAKKGVVTTRKRKEGKVS---SRKRPRAAHVKDALS-LGRPRTQG 762
KGK K LE P+F IP+ GGG +R RYP KFK+DAV YS++ ++G +GP G++GV+YA++ L I D +++ W ++ EA L + KG + R ++S R R A ++ + + PR++G
Sbjct: 273 KGKRKKGQLELEPPNFPIPELGGGSQRNRYPLKFKVDAVRYSQRKIKGVQGPNGTVGVTYASRILKIPDKATLAAWFKNVAKYEAALAEADTYKGGAKRKNRANNRLSLNAGRIRTHTAAEREVMDWVNEPRSEG 407 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig992.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig992.21.1 >prot_A-nodosum_M_contig992.21.1 ID=prot_A-nodosum_M_contig992.21.1|Name=mRNA_A-nodosum_M_contig992.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=373bp MNSACERRAVVGESRSLSNGGVGGSALTIIAASEAASTPSDGVEDGVEDGback to top mRNA from alignment at A-nodosum_M_contig992:256569..263565+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig992.21.1 ID=mRNA_A-nodosum_M_contig992.21.1|Name=mRNA_A-nodosum_M_contig992.21.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6997bp|location=Sequence derived from alignment at A-nodosum_M_contig992:256569..263565+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig992:256569..263565+ >mRNA_A-nodosum_M_contig992.21.1 ID=mRNA_A-nodosum_M_contig992.21.1|Name=mRNA_A-nodosum_M_contig992.21.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1119bp|location=Sequence derived from alignment at A-nodosum_M_contig992:256569..263565+ (Ascophyllum nodosum dioecious)back to top |