mRNA_A-nodosum_M_contig9914.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig9914.1.1
Unique NamemRNA_A-nodosum_M_contig9914.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: D7G6Q0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q0_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 5.330e-157
Identity = 281/511 (54.99%), Postives = 337/511 (65.95%), Query Frame = 3
Query:  747 MSTDNRFVRSFLMLGKAAYAAVKSVPKVVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNAESTINAVGAEARALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLKKHVLNEGLGVYMVQEHGLSMHANRVKIIKMPDADGRGGHITCTCCVPSRWRLLCCDALAVLKHIGRLDASMAFVDSGYTLALFRRYT-----PIPTILWRCLSGQSWRGSLLSP---VR*KAKLVLLRRPQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAPVHGMSSVRSYIGDLGVGGHAGAERPPARVWGPLAAQRYGTQDTSQRGHATGVGGXXXXXXSNATPSLSQGA 2255
            MS DNRFVRSFLMLGKAAY A  SVPK+V+MDAGHLKGSW+GVMY+L M +SNNK+IHV+TVLADKEN TNY FLL QTC+NE M+ L +SG+ TFY DGH+GSP AL  V+P AP R C+RH ITN NM+ MG Q +S  +Y+AA  PT+ LFEE M+ +K+ +P NY  LMS+ L  WTHHAT S LV    +TSN+AES+I+AVG + R ++P+HL   IAE+T  +LA NAELKKDS  ILVPFA KFME+ER LSL KHV + GLG Y+VQEHG S + NRV I+ +PD +G+GG + CTC VPSR+ LLC D+LAVLK I RLD + A VD GYTLA +R        P+   +W  LS    +G LL P    R        R P+ R                     XXXXXXX                PVHGM SVRS++GDL VGG AG ERP  RVWG LA QRYG+QD S R H  G G       S+A  S SQG+
Sbjct:  134 MSPDNRFVRSFLMLGKAAYVAAHSVPKIVAMDAGHLKGSWHGVMYVLCMHDSNNKIIHVSTVLADKENATNYEFLLQQTCRNEHMQRLLSSGEVTFYIDGHKGSPAALRAVLPQAPWRACVRHFITNRNMKAMG-QAYSNAVYRAAVAPTKALFEEIMEPVKKDFPGNYGMLMSNDLKKWTHHATPSNLVNLKMSTSNSAESSISAVGHQTREMDPYHLHIGIAEKTAEQLATNAELKKDSSAILVPFAAKFMEDERLLSLHKHVKSLGLGTYLVQEHGKSQYGNRVTIV-LPDTEGKGGRVECTCSVPSRFHLLCQDSLAVLKSIDRLDCTRAHVDGGYTLASYRALHSHPDYPVVLPIWSELS----KGDLLPPRQVTRQAGAPKKKRGPRQRSRIPGRNDNCQRGRGNVAQGGXXXXXXXNAQP-----------VPVHGMGSVRSHVGDLNVGGSAG-ERPTGRVWGGLAVQRYGSQDASGRDHTAGAGAG-----SSAMLSQSQGS 621          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5L9F2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F2_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 1.110e-135
Identity = 268/508 (52.76%), Postives = 328/508 (64.57%), Query Frame = 3
Query:  747 MSTDNRFVRSFLMLGKAAYAAVKSVPKVVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNAESTINAVGAEARALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLKKHVLNEGLGVYMVQEHGLSMHANRVKIIKMPDADGRGGHITCTCCVPSRWRLLCCDALAVLKHIGRLDASMAFVDSGYTLALFR---RYTPIPTIL--WRCLSGQSWRGSLLSP---VR*KAKLVLLRRPQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAI-APVHGMSSVRSYIGDLGVGGHAGAERPPARVWGPLAAQRYGTQDTSQRGHATGVGGXXXXXXSNATPSL 2243
            +S DNRFVRSFLMLGKAAY A  S+   V+MDAGHLKGSW GVMY+L M +SNNK+IHV TVLADKEN TNY+FLL QTC+NE M  L +SG+ TF  DGH+GSP AL  VVP AP R C+RHLITN NM+ MG+  +S  +Y+AA MPT+VLFEEA++ +K+ +P NY  LM + L  WTHHAT + LV    +TSN+AESTI+AVG + R ++P+H    IAE+T  +LA NAEL KD   ILVPFA KFME+ER LSL   +        + +   +S + NRV I+ MPD +G+GG +  TC V +R+ LLC DALAVLK I RLD + A +DSGYTLA +R    +   P +L  W  LS    +G LL P    R        R P+ R                      XXXXXXXXXXXXXXXXX  +   PVHGM SVRS++GDL VGG AG ERP  R+WG LA QRYG+QD S   HA G G       S +  S+
Sbjct:   55 VSPDNRFVRSFLMLGKAAYVAAHSM---VAMDAGHLKGSWKGVMYVLCMHDSNNKIIHVTTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFVIDGHKGSPAALRAVVPQAPWRACVRHLITNKNMKAMGHA-YSVAVYRAAVMPTKVLFEEAIEPVKKDFPANYNLLMKNDLDKWTHHATPNNLVNLKMSTSNSAESTISAVGHQKREMDPYHFHIEIAEKTAEQLATNAELLKDCHAILVPFAAKFMEDERLLSLNTSIA-WAWAPTLFRSTAMSQYGNRVTIV-MPDTEGKGGRVESTCRVSARFHLLCQDALAVLKSIDRLDCTRALIDSGYTLASYRVLHTHPDYPVVLPIWSELS----KGDLLPPRQVTRQAGTPKKNRGPRQRSRFPGRNDNFQRGRGNVAQDGGXXXXXXXXXXXXXXXXXGNSRPVPVHGMGSVRSHVGDLNVGGSAG-ERPTGRLWGGLAVQRYGSQDASGNDHAAGAGAGSCSMLSQSQGSI 551          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5K7Q3_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q3_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 2.980e-117
Identity = 190/325 (58.46%), Postives = 240/325 (73.85%), Query Frame = 3
Query:  747 MSTDNRFVRSFLMLGKAAYAAVKSVPKVVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNAESTINAVGAEARALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLK-KHVLNEGLGVYMVQEHGLSMHANRVKIIKMPDADGRGGHITCTCCVPSRWRLLCCDALAVLK 1718
            MS DNRFV+SFLMLGKAAY A  S+   V+MDAGHLKGSW GVMY+L M +SNNK+IH +TV+ADKE+ TN++FLL QTC+NE M  L +SG+ TF+ DGH+GSP AL  VVP AP R C+R LITN NM+ MG+      +Y+AA MPT+ LFEEA++ +K+ +P NY+ LM   L  WTHHAT S LV    +TSN+AESTI+ VG + R ++P+H    IAE+T  +LA NAEL KD   ILVPFA KFM++ER LSL  KHV + GLG Y+VQ HG + + NRV I+ +PD +G+GG + CTC VP+R+ LLC DALAVLK
Sbjct:    1 MSPDNRFVKSFLMLGKAAYVAAHSM---VAMDAGHLKGSWKGVMYVLCMHDSNNKIIHFSTVIADKEHATNFKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVVPQAPWRACVRQLITNKNMKAMGHVSLLVAVYRAAVMPTKALFEEAIEPVKKDFPANYKLLMKDDLDKWTHHATPSNLVNLKMSTSNSAESTISVVGHQKREMDPYHFHIEIAEKTAEQLATNAELLKDCHAILVPFAAKFMKDERLLSLSNKHVKSMGLGTYLVQVHGKNQYGNRVTIV-LPDTEGKGGRVECTCRVPTRFHLLCQDALAVLK 321          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: D7FMJ7_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ7_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 1.850e-82
Identity = 207/487 (42.51%), Postives = 266/487 (54.62%), Query Frame = 3
Query:  828 VVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNAESTINAVGAEARALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLKKHVLNE---GLGVYMVQEHGLSMHANRVKIIKMPDADGRGGHITCTCCVPSRWRLLCCDALAVLKHIGRLDASMAFVDSGYTLALFRRYT-----PIPTILWRCLSGQSWRGSLLSP---VR*KAKLVLLRRPQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAPVHGMSSVRSYIGDLGVGGHAGAERPPARVWGPLAAQRYGTQDTSQRGHATGVGGXXXXXXSNATPSLSQGA 2255
            VV++DAGHL+GSWNGVMY+L M +SNNK+ HV+TVLADKEN  NY+FLL + C+NE M+ L +SG+ TFY DGH+GSP AL  V+P AP   C+RHLIT+ NM+ MG+    A +Y+AA MPT+ LFEE ++ +K+     Y  LM + L  WTHHAT S+    +                  +     HL     E     L++     +D  +      D+    E Q    + +  +   G  V    EHG S + NRV I+ +PD +G+GG + CTC +PSR+ LL  D LAVLK I RLD + A VDSG+TLA  R        P+   +W  LS    +G LL P    R        R P+ R                       XXXXXXXXXXXXXXX      PV+ M S RS++GDL VG  AG ERP  R+WG LA QRYG+QD S R HA G G       S+A  S SQG+
Sbjct:   17 VVALDAGHLRGSWNGVMYVLCMHDSNNKITHVSTVLADKENAANYKFLLQEICQNEHMQRLLSSGEVTFYIDGHKGSPAALRVVLPQAPWCACVRHLITDQNMKAMGHAFSDA-VYRAAVMPTKALFEEGIEPVKK-----YGILMKNDLEKWTHHATPSQPGQPED--------------VHLQLCGVHHLRGRPPETGNRPLSSP---HRDCGENCGATRDECRIEEGQACHTRSIRGQVHGGREVAQPSEHGKSQYGNRVTIV-LPDTEGKGGRVECTCSIPSRFYLLYQDTLAVLKSINRLDCTRALVDSGHTLASNRALHSHPDYPVVLPIWSELS----KGDLLPPRQVTRQAGAPKKKRGPRQRSRIPGRNNCQRGRGNVAQGGSGRXXXXXXXXXXXXXXXGNAQPVPVYEMGSARSHVGDLNVGVSAG-ERPTGRLWGWLAVQRYGSQDASGRDHAAGPGAG-----SSAMLSGSQGS 469          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5KCE5_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCE5_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 7.690e-61
Identity = 110/181 (60.77%), Postives = 134/181 (74.03%), Query Frame = 3
Query:  828 VVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNAESTINAVG 1370
            +V+MDAGHLKGSW GVMY L M +SNNK+IHV+TVLADKE  TNYRFLL QT +NE M  L +SG+ TF+ DGH+GSP AL  VVP AP R C+RHLITN NM+ MG+    A +Y+AA MPT+ LFEEA++ +K+ +P NY  LM   L  WTHHAT   LV    +TSN+ ESTI+AVG
Sbjct:    1 MVAMDAGHLKGSWKGVMYFLCMHDSNNKIIHVSTVLADKEIATNYRFLLQQTFRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVVPQAPWRACVRHLITNKNMKAMGHXXXVA-VYRAAVMPTKALFEEAIEPVKKNFPANYNFLMKSDLEKWTHHATPGNLVNLKMSTSNSTESTISAVG 180          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5K394_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K394_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 7.990e-59
Identity = 123/259 (47.49%), Postives = 156/259 (60.23%), Query Frame = 3
Query:  828 VVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNAESTINAVGAEA------------------------RALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLK 1532
            +V+MDAGHLKGSW GVMY+  M +SNNK+IHV+T                 TC+NE M  L +SG+ TF+ DGH+GSP AL  V+P A  R C+RHLITN NM+ MG+  +S  +Y+AA MPT+ LFEEA++ +K+ +  NY  LM + L  W HHAT S LV    +TSN+AESTI+AVG +                            N +H    I E+T  +LA NAEL KD   ILVPFA KFME+ER LSLK
Sbjct:    1 MVAMDAGHLKGSWKGVMYVHCMHDSNNKIIHVST-----------------TCRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVLPQALWRACVRHLITNKNMKAMGHA-YSVAVYRAAVMPTKALFEEAIEPVKKDFLANYNLLMKNDLEKWAHHATPSNLVNLKMSTSNSAESTISAVGHQRXQPGQPKDVHLQLCGVHHFRGRPPETGNAYHFHIEIEEKTAEQLATNAELLKDFHAILVPFAAKFMEDERLLSLK 241          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5K405_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K405_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.200e-54
Identity = 147/307 (47.88%), Postives = 181/307 (58.96%), Query Frame = 3
Query: 1350 STINAVGAEARALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLKKHVLNEGLGVYMVQEHGLSMHANRVKIIKMPDADGRGGHITCTCCVPSRWRLLCCDALAVLKHIGRLDASMAFVDSGYTLALFR---RYTPIPTIL--WRCLSGQSWRGSLLSP---VR*KAKLVLLRRPQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAI-APVHGMSSVRSYIGDLGVGGHAGAERPPARVWGPLAAQRYGTQDTSQRGHATGVGGXXXXXXSNATPSL 2243
            S ++   ++ R ++P+H    IAE+T  +LA NAEL KD    LVPFA KFME+ER LSL KHV + GLG Y+ QEHG S + NRV I+ +PD +G+GG + CTC VP+R+  LC DALAVLK I RLD + A +DS YTLA +R    +   P +L  W  LS    +G LL P    R        R P+ R                     XXXXXXXXXXXXXXXXXX  +   PVHGM SVRS++GDL VGG AG ERP  R+WG LA QRYG+QD S   HA G G       S +  S+
Sbjct:   18 SVVDVCCSQKREMDPYHFHIEIAEKTAEQLATNAELLKDCHANLVPFAAKFMEDERLLSLNKHVKSMGLGTYLAQEHGKSQYGNRVTIV-LPDTEGKGGRVECTCRVPTRFHHLCQDALAVLKSIDRLDCTRALIDSRYTLASYRVLHTHPDYPVVLPIWSELS----KGDLLPPRQVTRQAGAPKKHRAPRQRSRFPGRNDNCQRGRGNVAQDGXXXXXXXXXXXXXXXXXXGNSRPVPVHGMGSVRSHVGDLNVGGSAG-ERPTGRLWGGLAVQRYGSQDASGNDHAAGAGAGSCAMLSQSQGSI 318          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5JC04_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC04_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.190e-52
Identity = 100/154 (64.94%), Postives = 121/154 (78.57%), Query Frame = 3
Query:  747 MSTDNRFVRSFLMLGKAAYAAVKSVPKVVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPTRVLF 1208
            +S DNRFVRSFLMLGKAAY A  S+   V+MDAGHLKGSW GVMY+L M +SNNK+IHV+TVLADKEN TNY+FLL QTC+NE M  L +SG+ TF+ DGH+GSP AL  V+P AP R C+RHL TN  M+ MG+  +S  +Y+AA MPT+VLF
Sbjct:  223 VSPDNRFVRSFLMLGKAAYVAAHSM---VAMDAGHLKGSWKGVMYVLCMHDSNNKIIHVSTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVLPQAPWRACVRHL-TNKIMKAMGHA-YSVAVYRAAVMPTKVLF 371          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5KQH4_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH4_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 9.160e-42
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 3
Query:  828 VVSMDAGHLKGSWNGVMYILSMKNSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDGHRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGN 1151
            +V+MDAGHL+ SW GVMY L M NSNNK+IHV+TVLADKEN TNY+FLL QTC+NE M+ L +SG+ TFY DGH+GSP AL  V+P AP R C+RHL+TN NM+ MG+
Sbjct:    1 MVAMDAGHLRDSWKGVMYALCMHNSNNKIIHVSTVLADKENATNYKFLLQQTCRNEHMQRLLSSGEVTFYIDGHKGSPAALRPVLPQAPWRACVRHLVTNKNMKAMGH 108          
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Match: A0A6H5K7B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B6_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.310e-40
Identity = 90/163 (55.21%), Postives = 110/163 (67.48%), Query Frame = 3
Query: 1386 LNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFADKFMENERQLSLKKHVLNEGLGVYMVQEHGLSMHANRVKIIKMPDADGRGGHITCTCCVPSRWRLLCCDALAVLKHIGRLDASMAFVDSGYTLALFR---RYTPIPTIL--WRCLSGQSWRGSLLSP 1859
            ++P+H    IAE+T  +LA NAEL KD   ILVPFA KFME+ER +SL KHV + GLG Y+VQEHG S + NRV II +PD +G GG + CTC VP+R+ LLC DALAVLK I RLD + A +DSGYTLA FR    +   P +L  W  LS    +G LL P
Sbjct:    1 MDPYHFHIGIAEKTAEQLATNAELLKDGHAILVPFAAKFMEDERLISLNKHVKSMGLGTYLVQEHGKSQYGNRV-IIVLPDTEGNGGRVECTCRVPTRFHLLCQDALAVLKSIDRLDCTRALIDSGYTLASFRVLHTHPDYPVVLPIWSELS----KGDLLPP 158          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9914.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Q0_ECTSI5.330e-15754.99MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L9F2_9PHAE1.110e-13552.76MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K7Q3_9PHAE2.980e-11758.46MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FMJ7_ECTSI1.850e-8242.51MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KCE5_9PHAE7.690e-6160.77MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5K394_9PHAE7.990e-5947.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K405_9PHAE1.200e-5447.88Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC04_9PHAE1.190e-5264.94MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KQH4_9PHAE9.160e-4266.67MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K7B6_9PHAE1.310e-4055.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9914contigA-nodosum_M_contig9914:3017..9009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog29760.VIT_03s0088g01070.t01
PFAMsDBD_Tnp_Mut,MULE,SWIM
Model size1909
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.07e-09
EggNOG OGs2CM7T@1|root,2QPJK@2759|Eukaryota,37K4I@33090|Viridiplantae,3GA22@35493|Streptophyta
DescriptionMuDR family transposase
Cds size1122
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9914.1.1prot_A-nodosum_M_contig9914.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig9914 3404..8263 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870531.944288-UTR-A-nodosum_M_contig9914:3016..34031680870531.944288-UTR-A-nodosum_M_contig9914:3016..3403Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9914 3017..3403 -
1680870532.0380287-UTR-A-nodosum_M_contig9914:8609..90091680870532.0380287-UTR-A-nodosum_M_contig9914:8609..9009Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig9914 8610..9009 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870531.9602108-CDS-A-nodosum_M_contig9914:3403..35521680870531.9602108-CDS-A-nodosum_M_contig9914:3403..3552Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9914 3404..3552 -
1680870531.974098-CDS-A-nodosum_M_contig9914:4336..45241680870531.974098-CDS-A-nodosum_M_contig9914:4336..4524Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9914 4337..4524 -
1680870531.9886556-CDS-A-nodosum_M_contig9914:5150..53051680870531.9886556-CDS-A-nodosum_M_contig9914:5150..5305Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9914 5151..5305 -
1680870531.9989622-CDS-A-nodosum_M_contig9914:5659..58841680870531.9989622-CDS-A-nodosum_M_contig9914:5659..5884Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9914 5660..5884 -
1680870532.0107315-CDS-A-nodosum_M_contig9914:6685..70091680870532.0107315-CDS-A-nodosum_M_contig9914:6685..7009Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9914 6686..7009 -
1680870532.026134-CDS-A-nodosum_M_contig9914:8182..82631680870532.026134-CDS-A-nodosum_M_contig9914:8182..8263Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9914 8183..8263 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig9914.1.1

>prot_A-nodosum_M_contig9914.1.1 ID=prot_A-nodosum_M_contig9914.1.1|Name=mRNA_A-nodosum_M_contig9914.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=374bp
MSTDNRFVRSFLMLGKAAYAAVKSVPKVVSMDAGHLKGSWNGVMYILSMK
NSNNKLIHVATVLADKENETNYRFLLDQTCKNELMRTLFTSGQATFYTDG
HRGSPPALAQVVPLAPVRTCLRHLITNSNMRRMGNQDHSALIYKAAKMPT
RVLFEEAMKLIKELYPKNYQSLMSHPLHTWTHHATNSELVVQDSTTSNNA
ESTINAVGAEARALNPFHLMTTIAEQTVGKLAANAELKKDSPDILVPFAD
KFMENERQLSLKKHVLNEGLGVYMVQEHGLSMHANRVKIIKMPDADGRGG
HITCTCCVPSRWRLLCCDALAVLKHIGRLDASMAFVDSGYTLALFRRYTP
IPTILWRCLSGQSWRGSLLSPVR*
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mRNA from alignment at A-nodosum_M_contig9914:3017..9009-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig9914.1.1 ID=mRNA_A-nodosum_M_contig9914.1.1|Name=mRNA_A-nodosum_M_contig9914.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5993bp|location=Sequence derived from alignment at A-nodosum_M_contig9914:3017..9009- (Ascophyllum nodosum dioecious)
ATCAAAAACGGGTCATCAGCCGGAAGGGCAACGTTCCACGTCGTGTGCAA GACTTGTACGTCGTGGTTCGTCAAGGCCCAACGCCAGGCCAACAACGACT TCAAAGTCACACAAGTTGGCAAGACACATGTGAACTGCGTAGGGGGCGGG CGTCGCCCTTCCGCAAACGTCGTGCAACCTATGATTGATCAGCTTGTACG GCCAACCCGAAGATTGGCGGGCCGCTATCAAGCGAACTCTTAAGACCGCA GGCTTGGATATCTCGGACCGCACGTCACAGAGATCGAAACGACGCATCGC GACTGCTTCCAGAGCCGAGGAGGCGGAAGCAATTGCGCGGATTCCGTCCT GGTGCGAGGCGATTGAACGTGATTGCCCGGGTTCTGTCGCCACCGTGGAG GTGAAGTCGTGTTGCGTGGACAAGTAGGTTGTTCGTGCTTGAGCGCTTTA CCATGAGGGTCACCCCGGTAGCATCCATACCGTCCATTCATTTTCGAAAT TGAATGGCCCCGGTAGCATACATACAATTTCACCTTTGAAAGGCACGAAC CCAAAACCACTGCCGCTGTGGTCGCACGAGCCGTATAAACTTGTCTCAAC TCGTTCGCAGTGGCTGTCTCTACGGCACATCTCACCCGCGTTGCCATTAT GTTTGGGCGTTGATGGATAGGCAGCGTCATGTTTGCTCGTGCTCAGTTAT TTTCTTTCGTTCCGTGTATGTTCGTTCCCTGCGTGTGTATTTATAGATGA GCACCGACAACCGGTTCGTGAGGAGCTTTCTGATGCTGGGGAAGGCCGCT TACGCTGCCGTCAAGAGCGTCCCCAAGGTAAGCGATGCATAATATGCTGC TGTAGTACCCGGTATGATCACAAATGAACACGCGAGTGAGCGTAGGGGCT GACATGAGGGAACCGCAAAATTCTCCTAAAAGCGTTCGCCGATTTTTTTG CGAACGCTACAGCAGTCATCTCTACACAGCAGTAGCGGCAGACATTGCCT TTTTCACGCTCCTTCCCATGCTTGCCCGCCATTTTTCGGCGCTGAATTGA AATATGTATTCCTCTGTCGAATGTTGTTGTTCCCTTCTACTTCATACTGT TTTCTCTCCTACACGTAGTGTACTGGTTGTACTGGTTCAGTGTTGTCGTG CACCGGCTGCATCTTGTCTAGGTTGGACGTTTTGTTACGTTCGTTTAGGG AAGAAAGGAGCAGTGGGTCTGGCCCAGTCCCGGGCTGCAGACGGTGTAGT ACCTAAAACGAGTTTGATTGGAAAGTCGTACATACAGCGCAGTTGACTGC AACGTCTTGTTTTGTTTTGTTTTGTTTTTTTGCTTCGGTACAAATTGTAT ACGTAAAACGTCTAACAACTGCTCAGAAGGTCTAGGTGCATTCAGATTTT TCTTTAAACACGCGTTGCTGGCATAAGCGGTAAGGCGGTCACGAAGCTGC TTCGCGTGAGTATTCGGGATACTTATAAAAGTACACGAGCTTCGCGCGCG GGCAAAAGACACGCTATTATTATTGGAGAATTACCGGGATACCGGTACAG TACTACTGCTGTACTGACAATTCAGTCCTGAGGAATTAAGAAGGAGCGTT GCTACCCTCTGGCAACTATCACCTACAGCAGTTTATGAGTCTGCATAGAC TTGCCTTCCCTGAGAGAACACCATTTCAAGGAAAGAGGGAAGGCTACTTG AGCGAATCGCTAAACGCATAGAACGGCCATATGGCTTATTACAGTACTGC TACAGCAGCACACAAGTACACTTTCTCGAATGTTGTTTGAGGACGTCCTT TATACGTTTGTCCTCTACGCCCTTGCCAGCAATCGTTTCTCTAGGAAATG GCGTACTGGATGTCGCCATTTCGACTCCCTCACGTCCCTGTATTTGTCTT CAGGGGGTACCGGATATCACAGCAGCAGTGTAACTGCACCTGGACGCTCT CGCCATTGCCGCTCAACAAATTCCCAAATGTCCCTATTACAAATGCACAG GTCGTGTCTATGGACGCTGGCCATCTGAAGGGATCATGGAACGGGGTGAT GTACATCCTTTCCATGAAGAACAGTAACAATAAACTGATCCACGTCGCCA CGGTCCTCGCTGACAAGGAGAACGAGACCAACTACAGGTTCCTCCTAGAT CAGACTTGCAAGAACGAGCTTATGAGGACACTTTTTACCTCAGGCCAGGC GACGTTCTACACCGATGGCCACAGGGGATCACCCCCGGCGCTCGCCCAGG TCGTGCCCCTGGCACCGGTCCGTACGTGCCTAAGGCATCTCATAACGAAC TCCAACATGAGGAGGATGGGTAACGTGAGTAAACGTCTCTGCGTTTATGG CTTTTTGCAATGGGACATTTTTAGGACAGCACTGCCCCCCACTTCATAAC CTCTGTTTTGGCCTTGCCTCTAGTGTTGTTGCCTGCATATGTACTCCGTG GTGAACCAGCAGGAGCCGCCGGGATTACATGTAGCCGGATGATAAGCGAT AGAGGACGATAATGCAAGGCCCCACCCATAATATAATATGGGCCACATAA TATAAGGAAAGGTGTAGGCCTAATATTTGTGCTCCAGTTGAAACACCGTT TCCCCTAATTTGAAATTGATTTAAATTTGAAACTTGATTTTGGCCCTTGA ATTATTGACCTTCCACTAATCGCCTGCCAGATTCTTGAGTGAGAGCCGCT TCGGCAGCGCAGACGACCGCCCGATCAGTCTTGTGCATGTTGGCAGTCAT TGCGTATGTGATATGCGCCTTGCTCTATGCATCAATTGTCGTTCGAACCC TTTCGCGCTACCCAAGGGTTGGCACCAGCGCAGGGGGAAAATGTCATCGT GGGTTGCCAACGTTTTCAATGCCCCGTTCCTTTTCGCCGCCGCCTACACC ACCTTGTAACCTTTGTGCTCAGAATATCACTCCATGTAAGCACTCTCGCT GCAGTTGAAATTGGCGGCTGTGAGAACACTTGCTAACGCCTTGTAACCTT TGTGCTCAGAAAATCAATCCATGCAAGCCCTCTCAACGCAGTTGAAATTG GCGGCTGTGCGAACACTTGCTTACAAGGCACAGGCTTTTATTATGGCCCT TTGTTTATTGTTCTGACCTACCGAGCAGGATCACTCTGCCCTAATCTACA AAGCGGCGAAGATGCCGACAAGGGTGTTGTTCGAGGAGGCGATGAAACTC ATCAAGGAGCTCTACCCGAAGAACTACCAGTCACTCATGTCCCACCCCCT CCACACATGGACGCACCATGCCACGAATAGCGAACTAGTCGTGCAAGACT CCACTACATCCAACAACGCGGAATCGACCATCAACGCGGTTGGGGCAGAG GTGGGTGTAGAAATTGTTTCGGCCTAACAGGTTACCTCAATTTTGAATCT GGGTGTGTTTCGTTATGGCTGTTTATTATCCAGTCGAAAAATGCCTACGA GAAAGACAGTTCGCCGACCCGTCTTTTTACCGCAAGCGATTTTCGATCCA TGGTTCTTACGCTCATCGGTTATTTTGTAATTGCTTGTTGCGGTTGGATG ATGGGGCCGGGTTCAGAAGACTGCCACACAGCACCACTACCAGCAGCAGG GTAGATTTTGGCCTTAGTTGGTTGTTGACTTCCCTTCTTCCGGCCGCGTG TCTGCAAGGACTGATGTCGCTCTGTTCGTTGACGCCACATTGTATTGCTC ACAGGCACGGGCGCTGAACCCCTTTCACCTCATGACGACGATAGCGGAAC AGACCGTGGGGAAACTCGCGGCCAACGCTGAACTTAAGAAGGACTCTCCT GATATTCTCGTTCCTTTCGCGGATAAGTTCATGGAGAACGAGAGGCAGCT CAGCCTCAAGTGAGTCGCACGTAGCATGTTGTGCGTTCTCCTATAGAATC TTTCCTGTTTTATGTGTTGCTTGTTCGTTCCTCCGGTGGTTTCGCGGTCT GCGGGTGTATATTTTCCAAGGGTTTACTCGTTAACGCTTCTTTTTTACGG ACAAATGACGAAGAAACCGCCTTAATCGATTTGACAGTAATTTTCAAGCG GTAGACGGTTTCTCGTTTTTTTACGGTACCGCTTAAACGGTAGGCGGTTC AACCTAGATACGACGATAATTTGACTGATTACCGTGACCGTCCACTTACT CGTTAATTTTTGGTCGGTAAAATTACCCAGTAAACCCTTGAATATATTCG TTTGTGGTTTGTACATATTCGTTAGTGTTTCTTTCATTTTCGGGTCTTCT GTCTTTAAACTACTTCCATCCCGGGATTTCCTCTCGTTTGACCCCGTGGT TCGTCCGTTGGTTGTAGGATGCTCCCTCCCTTTTTTGCATGTGTATGCAT ATGGCATATGGTGCACAAACGTAGGGTGAAAACATGCCTTTTGCGTTGGA TGGAACCTCACATTTCGTCCGCATACGTCTGGTCCCTTTCCTTTATGATT CGATTCGTGATTGCGTTGGCTACCATCGTACGCAGGAAACATGTCTTAAA TGAGGGTCTGGGGGTGTACATGGTCCAGGAACACGGTTTGAGCATGCACG CCAACCGGGTGAAGATCATCAAGATGCCGGACGCCGACGGGAGAGGCGGT CACATTACTTGCACCTGCTGCGTCCCTTCGAGGTGGAGGCTCTTGTGCTG CGACGCACTCGCGGTATTGAAACGTGAGTTGTCATCGGGATACCAACATG GGTTCTGAGATACTTCTTGACACAACATTATTGGCCCAATATTATGTCTT GGTTGCATCTATCTTCTTGTTCGTTTGTTTCGGTAGAGAAATCTGTCCTG CGTGCCATTGTGAGCTATAACTGTTTCTGTGTTCTGCCGCATGAACATAC TCGTGCAAAGCGGTACTCTCCGCTTCGCGTTCGTCCTGAGTTGTACGGCT TGATGCGGTCTGGCGATTATACGAAACGTGTCGCTGTGTGAGAGATTTCT CATCTCGCCGACTACCTCTTGGCTTCTTCCGTTTATACTAGCGTTCTTCG TCTCGCTTTTCTTCGTATCGTTGCCTCCCGGGCAGGGGAGGTTGGTATTT CTTCTGGATTATAATGAAACGCGTACAACCCCCTCCTGCCTACTGTCGCG AATACCTAGACGAGCATTTACAGTAATGCCCTCGAGATTTATCAATCCTT ACAGTAAGCAAATTACCCTCGCCCTCCCCGCAGCAAAAACATGACCGGTC GCTTTGTTTTTGCCCAGAGACGTGACGAGATAATATTGGCCGCCGCCGCT GTACAGGCGCCTTACTTACCGTCATTTGGTTGTGAGCAGTATTGTATGCT GTACATACCGCCAGATGGAACGTGTTTCGCTTCGGCGGAATTGAGTATGT TATTTCGCGGGGCACCTTTGACATTAACGTAAAACAGTTGACGCAATCTG ACCTATATCTTGTATCGCCCTTCTCCCAACTTGCCTATCTTTTGAATAAT TTGGCAGACATCGGCAGGCTTGATGCCTCGATGGCGTTTGTGGACAGCGG GTACACCCTGGCATTATTCAGGAGATACACGCCAATCCCGACTATCCTGT GGCGCTGCCTGTCTGGTCAGAGCTGGAGGGGTAGTCTCCTTTCCCCCGTC CGGTGAAAGGCCAAGCTGGTGCTCCTAAGAAGGCCGCAGGCGCGTGCGCG AATCCGTGGCCGCAACGACAACTGCCAGCGGGGCCGCGGTGACGGGGGTG GCCGGGGTGGCGGTGGCGGTAGCGGTTGCGGTAGCGGTAGCGGTGGCGGT AGCGGTAGTGGTGGCGGCGCCATTGCCCCCGTACACGGGATGAGCAGTGT TCGCAGCTACATTGGAGATCTCGGGGTGGGAGGTCACGCGGGTGCTGAGC GACCCCCCGCGAGGGTATGGGGGCCGCTCGCAGCGCAGCGTTACGGCACG CAGGACACTTCCCAACGCGGCCATGCAACGGGGGTCGGGGGGGGGGGGGC AGGGGCGGGGTCAAATGCCACGCCTAGCCTATCCCAAGGGGCG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig9914:3017..9009-

>mRNA_A-nodosum_M_contig9914.1.1 ID=mRNA_A-nodosum_M_contig9914.1.1|Name=mRNA_A-nodosum_M_contig9914.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at A-nodosum_M_contig9914:3017..9009- (Ascophyllum nodosum dioecious)
ATGAGCACCGACAACCGGTTCGTGAGGAGCTTTCTGATGCTGGGGAAGGC
CGCTTACGCTGCCGTCAAGAGCGTCCCCAAGGTCGTGTCTATGGACGCTG
GCCATCTGAAGGGATCATGGAACGGGGTGATGTACATCCTTTCCATGAAG
AACAGTAACAATAAACTGATCCACGTCGCCACGGTCCTCGCTGACAAGGA
GAACGAGACCAACTACAGGTTCCTCCTAGATCAGACTTGCAAGAACGAGC
TTATGAGGACACTTTTTACCTCAGGCCAGGCGACGTTCTACACCGATGGC
CACAGGGGATCACCCCCGGCGCTCGCCCAGGTCGTGCCCCTGGCACCGGT
CCGTACGTGCCTAAGGCATCTCATAACGAACTCCAACATGAGGAGGATGG
GTAACCAGGATCACTCTGCCCTAATCTACAAAGCGGCGAAGATGCCGACA
AGGGTGTTGTTCGAGGAGGCGATGAAACTCATCAAGGAGCTCTACCCGAA
GAACTACCAGTCACTCATGTCCCACCCCCTCCACACATGGACGCACCATG
CCACGAATAGCGAACTAGTCGTGCAAGACTCCACTACATCCAACAACGCG
GAATCGACCATCAACGCGGTTGGGGCAGAGGCACGGGCGCTGAACCCCTT
TCACCTCATGACGACGATAGCGGAACAGACCGTGGGGAAACTCGCGGCCA
ACGCTGAACTTAAGAAGGACTCTCCTGATATTCTCGTTCCTTTCGCGGAT
AAGTTCATGGAGAACGAGAGGCAGCTCAGCCTCAAGAAACATGTCTTAAA
TGAGGGTCTGGGGGTGTACATGGTCCAGGAACACGGTTTGAGCATGCACG
CCAACCGGGTGAAGATCATCAAGATGCCGGACGCCGACGGGAGAGGCGGT
CACATTACTTGCACCTGCTGCGTCCCTTCGAGGTGGAGGCTCTTGTGCTG
CGACGCACTCGCGGTATTGAAACACATCGGCAGGCTTGATGCCTCGATGG
CGTTTGTGGACAGCGGGTACACCCTGGCATTATTCAGGAGATACACGCCA
ATCCCGACTATCCTGTGGCGCTGCCTGTCTGGTCAGAGCTGGAGGGGTAG
TCTCCTTTCCCCCGTCCGGTGA
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