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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1565 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 960 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870529.6474817-UTR-A-nodosum_M_contig9909:13647..14009 | 1680870529.6474817-UTR-A-nodosum_M_contig9909:13647..14009 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig9909 13648..14009 - |
| 1680870529.6577005-UTR-A-nodosum_M_contig9909:14326..14569 | 1680870529.6577005-UTR-A-nodosum_M_contig9909:14326..14569 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig9909 14327..14569 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870529.6690936-CDS-A-nodosum_M_contig9909:14569..14960 | 1680870529.6690936-CDS-A-nodosum_M_contig9909:14569..14960 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9909 14570..14960 - |
| 1680870529.6806695-CDS-A-nodosum_M_contig9909:15073..15642 | 1680870529.6806695-CDS-A-nodosum_M_contig9909:15073..15642 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9909 15074..15642 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9909.2.1 >prot_A-nodosum_M_contig9909.2.1 ID=prot_A-nodosum_M_contig9909.2.1|Name=mRNA_A-nodosum_M_contig9909.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=320bp
PNRRLRQATVVRSCRYKNGGVLCTARTGWDGQRQQQKVPNRRLRQATVVR
SCGYKNGGVLCAARTRRDGQRLQQKVPNRRLRQGTVVRSWRYKNGGILCA
ARPGRDGQRQEQKVPNGRLQQATVVRSCRYKNGGVLCAARPGRDGQRQAQ
KVPNRRLRKATVIWSCRYKNGGVLCAARTRRDGQPLQQKVAELKVAASDR
RSELQVQKRWSTVHSTHRTGWSTSAAESAEPKAAASNRGSELQVQKRWST
VRSTHQTGWSTSAAESAEPKVAASGRLPEWPTQRRRSTVHSTPDYKTVSK
DTRRERLAHTTPEWKPLVT* back to topmRNA from alignment at A-nodosum_M_contig9909:13648..15642- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig9909.2.1 ID=mRNA_A-nodosum_M_contig9909.2.1|Name=mRNA_A-nodosum_M_contig9909.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1995bp|location=Sequence derived from alignment at A-nodosum_M_contig9909:13648..15642- (Ascophyllum nodosum dioecious)
CCGAACCGAAGGTTGCGGCAAGCGACCGTCGTTCGGAGTTGCAGGTACAA
AAACGGAGGAGTACTGTGCACAGCACGCACCGGATGGGATGGTCAACGTC
AGCAGCAGAAAGTGCCGAACCGAAGGCTGCGGCAAGCAACCGTCGTTCGG
AGTTGCGGGTACAAAAACGGTGGAGTACTGTGCGCAGCACGCACCAGACG
GGATGGTCAACGTCTGCAGCAGAAAGTGCCAAACCGAAGGTTGCGGCAAG
GAACCGTGGTTCGGAGTTGGAGGTACAAAAACGGCGGAATATTGTGCGCA
GCACGCCCCGGACGGGATGGTCAACGTCAGGAGCAGAAAGTGCCGAACGG
AAGGTTGCAGCAAGCAACCGTCGTTCGGAGTTGCAGGTACAAAAACGGTG
GAGTACTGTGCGCAGCACGCCCCGGACGGGATGGTCAACGTCAAGCGCAG
AAAGTGCCGAACCGAAGACTGCGGAAAGCAACCGTTATTTGGAGTTGCAG
GTACAAAAACGGTGGAGTACTGTGCGCAGCACGCACCAGACGTGATGGTC
AACCTCTGCAGCAGAAAGTGTCGAACCGAAAGCTGCGGCAAGCGACCGTC
GGTCGGAGTTGTAGATACAAAAACGGCGCAGTACTGTGTGCAGCACGCAC
CGGACGGGATGGTCAGCGTCTGCAGCAGAAAGTGCCGAACTGAAGGTTGC
GGCAAGCGACCGTCGTTCGGAGTTGCAGGTACAAAAACGGTGGAGTACTG
TGCACAGCACGCACCGGACGGGATGGTCAACGTCAGCAGCAGAAAGTGCC
GAACCGAAGGCTGCGGCAAGCAACCGTGGTTCGGAGTTGCAGGTACAAAA
ACGGTGGAGTACTGTGCGCAGCACGCACCAGACGGGATGGTCAACGTCTG
CAGCAGAAAGTGCCGAACCGAAGGTTGCGGCAAGCGGCCGTCTTCCCGAG
TGGCCAACGCAAAGACGTCGGAGTACTGTGCACAGCACGCCAGACTACAA
AACGGTGTCGAAGGATACAAGGAGAGAGAGGTTGGCCCACACCACTCCGG
AATGGAAACCATTGGTGACGTAATTCCGAGCTGCGCTAGACATACAACTA
TTCATTCTCCTCCCAAGACAAGTCAACCGTCGGGTGTTTGCTGGGACTCT
CGTAAACGAGTACGACACCCAGAAATTACGTCTACGGGGTCGAAGCGAGC
TGCCGCTCGAGAACCGAGTGCAGAAGTGGTGACTATGCCGGATATCAACG
GGGGAAAATCTACAGTCGAACAAAATTCTTCAGTGAAGATGGAGGTGCAG
CTCTCCTTGTAGCCAGGTAAACTACACGCGACCACAAACCCTATCTGCTT
TATATTATTTTTTATACTGACGTATTACGATTCCGGTGAATGGGAAGGAA
ACACACACGGGACCTCATTTGCTGGCTATTCATTTTGTTCAGATTGAAAG
CGTAACCTGTCTCGTTTTTAAGTCTTGCGTTGTGTTTCGTCACAATGCTG
TGAGTTCAACTCAAGGCCCCTTCTTCCTTATAGACCCTCATGACCTTCAG
CTGCGGCCATTCCTTTACGAAACACGTCACTCGTGCTTACCCCCACTATC
TTGTTCTACCGTTCTCCCGTGTTTCAAACCCAGGTGCTGTTGTCAAGAGC
GTGGTTATGGTATTTATACTAGAGCCACCGGGATACTGATGGGTCTGGTG
AGGGTCTTAACGTGTGTACCTCTGTGATAACTTCATGCATTTTCCTAGGT
ACTCTATTCTCTAGCGGAGACATTTTCAGTTGATAGTCTATAAATATGCC
GAGTGTTTCATCCTTCATGTGCCGGTACTGAAGATACTGTAGAAGTCCGG
ATGTAGCGACAAAAGAAGTTCGTGTAGGTTGCACCGGACCTGAGGGGGAT
GCTAGTTAGGATGACTTCCTGATCTCTTTGACCATCCCGATTCCGATTTC
GAGGGCGGCGAGCGTTTGTGTTTGGTAGAGTTGTCGTCGCGAATG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig9909:13648..15642- >mRNA_A-nodosum_M_contig9909.2.1 ID=mRNA_A-nodosum_M_contig9909.2.1|Name=mRNA_A-nodosum_M_contig9909.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at A-nodosum_M_contig9909:13648..15642- (Ascophyllum nodosum dioecious)
CCGAACCGAAGGTTGCGGCAAGCGACCGTCGTTCGGAGTTGCAGGTACAA
AAACGGAGGAGTACTGTGCACAGCACGCACCGGATGGGATGGTCAACGTC
AGCAGCAGAAAGTGCCGAACCGAAGGCTGCGGCAAGCAACCGTCGTTCGG
AGTTGCGGGTACAAAAACGGTGGAGTACTGTGCGCAGCACGCACCAGACG
GGATGGTCAACGTCTGCAGCAGAAAGTGCCAAACCGAAGGTTGCGGCAAG
GAACCGTGGTTCGGAGTTGGAGGTACAAAAACGGCGGAATATTGTGCGCA
GCACGCCCCGGACGGGATGGTCAACGTCAGGAGCAGAAAGTGCCGAACGG
AAGGTTGCAGCAAGCAACCGTCGTTCGGAGTTGCAGGTACAAAAACGGTG
GAGTACTGTGCGCAGCACGCCCCGGACGGGATGGTCAACGTCAAGCGCAG
AAAGTGCCGAACCGAAGACTGCGGAAAGCAACCGTTATTTGGAGTTGCAG
GTACAAAAACGGTGGAGTACTGTGCGCAGCACGCACCAGACGTGATGGTC
AACCTCTGCAGCAGAAAGTTGCCGAACTGAAGGTTGCGGCAAGCGACCGT
CGTTCGGAGTTGCAGGTACAAAAACGGTGGAGTACTGTGCACAGCACGCA
CCGGACGGGATGGTCAACGTCAGCAGCAGAAAGTGCCGAACCGAAGGCTG
CGGCAAGCAACCGTGGTTCGGAGTTGCAGGTACAAAAACGGTGGAGTACT
GTGCGCAGCACGCACCAGACGGGATGGTCAACGTCTGCAGCAGAAAGTGC
CGAACCGAAGGTTGCGGCAAGCGGCCGTCTTCCCGAGTGGCCAACGCAAA
GACGTCGGAGTACTGTGCACAGCACGCCAGACTACAAAACGGTGTCGAAG
GATACAAGGAGAGAGAGGTTGGCCCACACCACTCCGGAATGGAAACCATT
GGTGACGTAA back to top
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