mRNA_A-nodosum_M_contig99.59.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: L1JX35_GUITC (Sterol desaturase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JX35_GUITC) HSP 1 Score: 201 bits (510), Expect = 4.050e-60 Identity = 93/182 (51.10%), Postives = 120/182 (65.93%), Query Frame = 1
Query: 4 NSISASIVAGTVTHLIMAGKTKLYWD-EGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSFLGRRYSCTKTK 546
N I+A AG V I+ G T+L +D + GR + LA+ WQ LEYYWHRLMHLP Y HK HH YKSP+PFDD++IHP+EA+GYY LYSPPF+ + V+ F LYM I G+CG+LDH G+ G+Y+T DHD+HH FD N+AFPF + D+LHGT+ G +G Y + K
Sbjct: 80 NVITAGCSAGFVVRSIVRGSTRLLFDWKAAGRLPGVVGTFCLAVGWQSVLEYYWHRLMHLPFFYKHFHKMHHSYKSPQPFDDMYIHPVEAVGYYCILYSPPFVFPLHVYGFVLYMAIMGVCGILDHSGIKWGFLGIYNTEDHDKHHEHFDCNFAFPFVWMDILHGTFAGDHMGIHYPLSSAK 261
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A7S1GXN0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GXN0_HEMAN) HSP 1 Score: 200 bits (508), Expect = 2.950e-59 Identity = 100/177 (56.50%), Postives = 119/177 (67.23%), Query Frame = 1
Query: 1 INSISASIVAGTVTHLIMAGKTKLYWD-EGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSFLGRRY 528
IN AS VAGTV HL G+T++ + + G + G A A EYYWHRLMH Y+RLHK HHFYKSPEPFDDL+IHPLEA GYY LYSPPF L I F YM I G+CGVLDH GV + +PGLY+ DHD HHS+F+VNYAFP P D+LHGT+ G+ +G R+
Sbjct: 118 INLAMASSVAGTVAHLCCRGRTRMVFTLQDAGGVIGLLGWTGAAFALHNVAEYYWHRLMHHRFFYSRLHKLHHFYKSPEPFDDLYIHPLEAAGYYAILYSPPFALPIHALGFGFYMAIMGLCGVLDHSGVRVRVPGLYAAEDHDLHHSKFEVNYAFPHPLMDILHGTFSGTCMGFRF 294
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A482SNF4_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNF4_9ARCH) HSP 1 Score: 184 bits (467), Expect = 1.250e-53 Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 124 LAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSFLGRRYSCTKT 543
LA ++ EYYWHRLMHL Y HK HH YK+PEPFDD++IHP+EA GYY LY+PPF+ + SF YMVI GI GV+DH G+ S+P +Y+T DHD HH++F+VNY+FPFP+ D+LHGT+EG FLGR+Y+ +T
Sbjct: 117 LACTYESLAEYYWHRLMHLKFFYIAFHKMHHQYKAPEPFDDMYIHPVEAFGYYCILYAPPFLFTMHYVSFIAYMVIMGIFGVMDHSGIKFSIPAIYNTVDHDSHHAKFEVNYSFPFPYLDILHGTFEGEFLGRQYTRKRT 256
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: C1FEX9_MICCC (C-4 sterol methyl oxidase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEX9_MICCC) HSP 1 Score: 174 bits (442), Expect = 9.760e-50 Identity = 92/181 (50.83%), Postives = 110/181 (60.77%), Query Frame = 1
Query: 4 NSISASIVAGTVTHLIMAGKTKLYW----------DEGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILV-IPVWSFALYMVICGICGVLDHCGVALSLP-GLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGS 510
N + +S+ AG +AG KL+ A+ + G LA+ WQ LEYYWHR MHLP VY LHK+HH YKSP+P+DDLFIHP E+ GY L LYSP F + +PV +F LYM I G CGVLDHCGV + P G Y T HD HH FD N+AFPFP D LHGT+ S
Sbjct: 99 NLVVSSLFAGATCEAYLAGDGKLFGLFRSTLVNASAYSVASAYSVLVGAVLAVTWQSVLEYYWHRAMHLPRVYRLLHKFHHHYKSPQPWDDLFIHPAESFGYCLILYSPAFCVPSLPVQAFLLYMTIMGACGVLDHCGVKMRWPFGAYDTQFHDVHHRSFDANFAFPFPTMDRLHGTHRAS 279
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: W7TYR2_9STRA (C-4 sterol methyl oxidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR2_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.010e-47 Identity = 78/152 (51.32%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 49 IMAGKTKLYWDEGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYE 504
++ + ++W GE +W + + LG WQ EYYWHRLMH VY R HK+HHFYK+P PFDD++I PLEA+GYY LYSP +L + V SFA+Y+ + G+CG+LDH G+ + LP +Y T HD HHS + N+ FPFPF D+LHGTY
Sbjct: 152 VLGTREVIWWLLGE--SWLVVASLG----WQSAWEYYWHRLMHYGPVYRRFHKHHHFYKAPAPFDDMYIAPLEALGYYFILYSPALVLPMHVLSFAVYLTLLGLCGILDHSGIDVRLPRVYDTRFHDIHHSYTNANFGFPFPFLDVLHGTYR 297
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A7S3D0N0_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D0N0_9EUKA) HSP 1 Score: 167 bits (422), Expect = 6.820e-47 Identity = 76/165 (46.06%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 28 AGTVTHLIMAGKTKLYWDEGEGRAWRIAS-GLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSFLG 519
A T L+ G + + ++ E W+++ L I LEYYWHRLMHL Y HKYHH++KSPEPFDD++IHPLEA+GYY+ +YS PF++ + +FA YM++ G+ GV+DH G+ P Y++ DHD HH +++VNY+FPF + D+LHGT+ G++ G
Sbjct: 89 ATTAIELVCRGYSSMRFEPVENE-WKMSIVSFFLGIVLHMMLEYYWHRLMHLRWFYCTFHKYHHYFKSPEPFDDMYIHPLEALGYYIIMYSTPFLIPMHWTAFAGYMIVVGVAGVMDHSGIKFHFPLFYASEDHDLHHEKYEVNYSFPFMWMDILHGTFRGTYAG 252
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A485KEW3_9STRA (Aste57867_4084 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KEW3_9STRA) HSP 1 Score: 164 bits (415), Expect = 7.170e-46 Identity = 77/182 (42.31%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 4 NSISASIVAGTVTHLIMAGKTKLYWDEGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSFLGRRYSCTKTKA 549
N I A+ A T L + G +++ +D+ + + S LA+ +EYYWHRL+H+ A+Y R+HK HH YK P+PFDD+++HP E Y+ LY PPF+L + V +F LYMV+ G+ GVLDH G++ +P +Y DH HH++ +VNY FPF + D++HGT+ G F G + T T +
Sbjct: 74 NLIMAATFAMLSTELHVRGHSRMCFDDSSPPSSLVVSQAVLAMLGSNLVEYYWHRLLHIRALYVRVHKVHHHYKRPQPFDDMYMHPFEGAIYFCILYGPPFVLPMNVHAFILYMVVMGLFGVLDHSGLSFHIPLVYKAQDHAVHHAKVNVNYGFPFVYLDLVHGTFHGEFAGVTFGSTSTNS 255
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A6G0WDA8_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDA8_9STRA) HSP 1 Score: 155 bits (393), Expect = 9.350e-43 Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 4 NSISASIVAGTVTHLIMAGKTKLYWDEGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSFLG 519
N + A+ A T L M G +++ +D A I + +A ++ +EYYWH L+H +Y R+HK HH YK P+PFDD+++HP E YYL LY PPF+ + V +FA+YM+I G GVLDH G+ +P +Y++ DH HH++ VN FPFP++D+LHGT+EG F G
Sbjct: 71 NLLLAATCAMVSTELHMRGHSQMTFDASPSIA-TIVRQIIVACVFENTVEYYWHCLLHCRFLYTRVHKVHHHYKRPQPFDDMYMHPFEGAVYYLVLYGPPFVFSMHVSAFAIYMIIMGTFGVLDHSGLPFRIPLVYNSEDHAMHHAKVIVNLGFPFPYWDILHGTFEGEFAG 241
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A830HM61_9CHLO (Fatty acid hydroxylase domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HM61_9CHLO) HSP 1 Score: 156 bits (394), Expect = 1.080e-42 Identity = 87/171 (50.88%), Postives = 105/171 (61.40%), Query Frame = 1
Query: 1 INSISASIVAGTVTHLIMAGKTKLYWDEGEGRA----WRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILV---IPVWSFALYMVICGICGVLDHCGVA-LSLPG-LYSTTDHDRHHSRFDVNYAFPFPFFDM 486
INS ++S AGT+ + A T W A A+AWQ +EYYWHRLMH +Y HK HH Y+ P PFDDLFIHP+EA+GYYL LYSP F+ + IP+ SF YM + G+CGV DH GVA L +PG +Y TTDH HHS F VNYAFPFP D+
Sbjct: 102 INSFTSSAFAGTIAYAFHANLT---WCRITTTARDDYTDYFKAFATAVAWQSVIEYYWHRLMHWGWIYKAFHKLHHTYQHPVPFDDLFIHPVEAMGYYLILYSPAFLPILPKIPLASFVTYMAVMGLCGVFDHSGVASLRIPGGIYETTDHANHHSPFVVNYAFPFPLMDI 269
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Match: A0A024URC2_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URC2_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.710e-42 Identity = 71/171 (41.52%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 4 NSISASIVAGTVTHLIMAGKTKLYWDEGEGRAWR-IASGLGLAIAWQCFLEYYWHRLMHLPAVYARLHKYHHFYKSPEPFDDLFIHPLEAIGYYLQLYSPPFILVIPVWSFALYMVICGICGVLDHCGVALSLPGLYSTTDHDRHHSRFDVNYAFPFPFFDMLHGTYEGSF 513
N + A+ A L + G++ + +D E +W+ IA + LAI +EYYWHRL+H +Y R+HK HH+YK P PFDD+++HP+E Y+ LY PPF++ + V SF +YM++ G+ GV+DH G++ +P +Y++ DH HH++ N FP P++D+LHGT++G F
Sbjct: 23 NLLLAATYAMAAAELHVRGRSAMVFDA-EWPSWKTIAVQVALAILGANCVEYYWHRLLHTRFLYTRVHKVHHYYKRPRPFDDMYMHPVEGAAYFFILYGPPFVMSMHVVSFVIYMMVMGLFGVMDHSGLSFRIPLVYTSNDHATHHAKVHFNLGFPLPYWDILHGTHDGDF 192 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig99.59.1 >prot_A-nodosum_M_contig99.59.1 ID=prot_A-nodosum_M_contig99.59.1|Name=mRNA_A-nodosum_M_contig99.59.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=169bp MAGKTKLYWDEGEGRAWRIASGLGLAIAWQCFLEYYWHRLMHLPAVYARLback to top mRNA from alignment at A-nodosum_M_contig99:581296..583669- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig99.59.1 ID=mRNA_A-nodosum_M_contig99.59.1|Name=mRNA_A-nodosum_M_contig99.59.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2374bp|location=Sequence derived from alignment at A-nodosum_M_contig99:581296..583669- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig99:581296..583669- >mRNA_A-nodosum_M_contig99.59.1 ID=mRNA_A-nodosum_M_contig99.59.1|Name=mRNA_A-nodosum_M_contig99.59.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=507bp|location=Sequence derived from alignment at A-nodosum_M_contig99:581296..583669- (Ascophyllum nodosum dioecious)back to top |