mRNA_A-nodosum_M_contig988.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig988.7.1
Unique NamemRNA_A-nodosum_M_contig988.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 4.990e-91
Identity = 179/358 (50.00%), Postives = 219/358 (61.17%), Query Frame = 1
Query:    1 FDAFRRALT-GETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICAS---------GYRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGT-SRTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            ++AFRR L  G+ PA V P+RVTLK GA    VKA+PRVY P K+AWL          G+V+ N Q + AS         GYRLV+DF   N Q E VPG M N E    +   A  + ++D LQ YWQCPLA EA+E FT  T  GL+TP RVPQG++NATSYFQ  +  +L  L    C ++VDDV   G   ++L+  L  +L R    GL++AAHK   F   + WCGK+YS   V HDPER+ GL  MRRPET GELM+FLQA NW+R SLP MAEVV PLR  +E  L G  SRTKR A  RA+     TP  VEAW  +++++  AVALS   P  C  LMFPDASD  WG
Sbjct:  738 WNAFRRGLRHGDPPANVEPLRVTLKPGA--RPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGL---NCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG-CAVLMFPDASDEHWG 1082          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 8.530e-91
Identity = 167/361 (46.26%), Postives = 220/361 (60.94%), Query Frame = 1
Query:    1 FDAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICASG-------------YRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGT-SRTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            F+ FRR + G+ PA V PM V LK GA    VKA+ R Y P+K+ WL      L   G+VY N Q I AS              YR V DF  +N Q E  PGPM + E + ++   A  + ++D LQGYW  PLA EA+E FT +   GL++P RVPQGV+NATSY+QG M  +L +L    C+++VDD+   G + E+L+  L  +L R    GLF+AAHK   +   VKWCGK+YS   + HD +R+ GL  +RRPET GELM+FLQA NW+R SLP M+E+VAPLR  +E  + G  +RTKR AS RA+    WTP  VE+W+ +++M+ NAV L +        LMFPDASD  WG
Sbjct:  630 FNVFRRGVRGDPPANVPPMTVKLKTGA--KPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTL-YHPVAGKAVLMFPDASDEHWG 984          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 4.430e-76
Identity = 154/353 (43.63%), Postives = 205/353 (58.07%), Query Frame = 1
Query:   31 ETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICASG---------------YRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGTSR-TKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            E   +V P+++TLK G  +  V+ K RVY P K+ WL      L   GMV    Q + AS                YRL  D+   N QCE VP  + + E++     GA  F  +D LQGYWQ PLAE ARE F+  T +GLF PTRVPQ V+NAT YFQ +M E+L  L    C ++VDD    G    +L+  L  +L R  + G+F AAHK   F  +++WCGK+YSG  V  DPER++GL +MRRPET G+LM+FLQA  W+R SL  +AEV+ P+R L+E  +    R TK  A  RA+    WT   VEAW ++++++ +AVALS  + D    LMFPDAS+  WG
Sbjct:  389 EVQRKVEPLKMTLKPG--VQHVQEKARVYSPAKATWLSGCMAALVAMGMVVKTIQAVWASPAMTVPKPGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGL---NCAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPK-DGFAVLMFPDASEEHWG 735          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A225VK89_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VK89_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.530e-61
Identity = 130/358 (36.31%), Postives = 198/358 (55.31%), Query Frame = 1
Query:    1 FDAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQG-----------ICASGYRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGTSRTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            +  +R  L  + PARV P+++ LK  A+ +  + K R Y PEKS +L+   + L E G VY N Q               S +R   D+ P+N   E + G M   ++  E C G + +   D L+G+WQ PL E  REY +++T  G+FTPTRVPQG  +A  +FQ  +  VLG+LV +  ++++DD+ V   S  EL+  ++AVL +  E GL L   K  LF  EV+WCG++ +   + HDPER++ L +M  P T  EL +FL A+NWMR  L   A V  PL+  ++  L GT +TKR A   A +    T   +++++  +E+L ++  L++  P+    L+  DASD  WG
Sbjct:  544 YGGWRIELGNDPPARVPPLKIRLK--ANAAPYRCKVRQYSPEKSQFLEAFNKKLVELGWVYENHQSRWCCPALPVRKASTSEFRQTTDYRPVNALTEPIAGVMPRLDVALEVCRGKMFYALFDFLKGFWQLPLDESCREYLSYMTDKGIFTPTRVPQGSTDAALHFQATVEMVLGDLVNKNVIVWIDDLLVFADSAHELLDVIKAVLTKLDEFGLLLNPKKSSLFLTEVRWCGRIINRQGIGHDPERIKALQDMPAPTTAAELQQFLCASNWMRAGLVDYARVARPLQEKLDDALSGTKKTKRAA---AGVQITLTDSELKSFEAVKELLGHSAMLAYPDPEKQLCLL-SDASDYGWG 895          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A0G4J7H8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7H8_PLABS)

HSP 1 Score: 220 bits (560), Expect = 1.280e-60
Identity = 133/364 (36.54%), Postives = 196/364 (53.85%), Query Frame = 1
Query:    4 DAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICAS-----------GYRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEH------RLKGTSRTKRK--ASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFW 1038
            + FR  L  + P  V PM   LK GA  +  + KPR Y P +  +L +   +L E G++Y N     AS           GYRL  D   +N +      PM N E    K  G   F T+D  +G+W  PLA+E +E F+F+T D ++TPTR  QG MN+   FQ  +  +  ++     LI++DD+    RS  EL+  L  VL RC ER L L   K  LFA+E+KWCG++YS   +RHDPER+  L+ M +P T+ +L +FL A NWMR S+P  A +V PL+A+++       R++   R  +   AS   L+D  W     +A+++ R  L+N V L++ +PD  +  +F DAS++ W
Sbjct:  138 NEFRTKLGHDAPVDVEPMVTKLKPGA--TPYRCKPRTYNPNQKEFLDDMIRMLKENGLIYLNLNSRWASPVLVVKKPHGNGYRLCVDLRQVNARSVPTAWPMPNVEAATRKLNGMTCFFTIDAHKGFWLMPLAKECQEIFSFMTDDAVYTPTRSIQGGMNSALQFQARVARIFDDMQDHL-LIWIDDLLGFARSEAELLAQLSLVLERCGERNLKLNPTKCTLFARELKWCGRIYSKDGIRHDPERIESLMNMPQPTTIKDLQQFLWAANWMRTSVPGYAHIVGPLQAIIDEAHAELRRIQPDLRNVQSSSASSMGLIDLGWNTVHSQAFEDLRFALINHVQLAYPKPD-YQTCLFTDASEVAW 497          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A6A3K6I0_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K6I0_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.020e-60
Identity = 128/358 (35.75%), Postives = 198/358 (55.31%), Query Frame = 1
Query:    1 FDAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPN--PQGICAS---------GYRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGTSRTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            +  +R  L  + PARV P+++ LK  A  +  + K R Y PEKS +L+   + L   G VY N   +  C +          +R   D+ P+N   E + G M + E+  E C G + +   D L+G+WQ PL + ++EY +++T  G+FTPTRVPQG  +A  +FQ  +  VLG+LV ++ ++++DD+ V   + EEL+  + A L +  E GL L   K  LF  EV+WCG++ S   V HDPER++ L EM  P T  EL +FL A+NWMR +L   + V  PL+  ++  L GT +TKR A+   L   +   + +EA+ + +++L N   L+F  P   +  +  DAS   WG
Sbjct:  486 YGGWRLELGDDPPARVPPLKIRLKPNA--TPYRCKVRQYSPEKSEFLEAFNKKLVSLGWVYENRASRWCCPALPIRKPGTDSFRQTNDYRPLNNVTEAIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGNTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERIQALREMPAPSTAAELQQFLCASNWMRSTLVDYSRVARPLQECLDRALSGTKKTKRAAAGIHL---ELNTEELEAYSSVKDLLGNTAMLAFPYPAK-QLCVLSDASGSGWG 837          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.860e-58
Identity = 131/363 (36.09%), Postives = 194/363 (53.44%), Query Frame = 1
Query:    4 DAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICASGYRLVA----DFSPING------------QCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRL-KGTSRTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            D FR   + + P RVAP++V+LK G  ++  K++PR Y P+  A+L+ H + L +  +V+ NP+   AS  R+V     D  P+ G            + E +P PM   E+   +  GA  F  +D  +G  Q PL  +++EYFTFVT  G++TPTRVP G  +A +Y QG++ E+LG+L+G   L ++ D+         L+  L  VL RC E GL L A K   FA EV WCGKL S   V H PERV+GL+ +    T GEL +F+ A  WMR  +P        L A++E  +    SR K+K +R  L+D  W+ +     +  R+ L+N + L+   P      ++ DAS  +WG
Sbjct:  150 DVFRLQFSDDPPVRVAPLQVSLKPG--VTPTKSQPRRYSPDDRAFLERHVDALWQHSLVFRNPRSRWASAPRIVRKKEQDHDPLAGPRMTVYTRAENERTEAMPWPMPVLEVVIGELEGAHVFFVLDWFRGDCQLPLHPDSQEYFTFVTHRGMYTPTRVPTGATDAVAYCQGVVEEILGDLLGNGILCWLGDILGYAADATALMELLDKVLARCEEYGLKLLAKKCQFFATEVMWCGKLISAQGVMHCPERVQGLIGIPLSRTAGELQQFICAITWMRRGIPEYNRPTGDLYAVLERAMILAGSRKKQKLNRFLLIDAGWSERDTACLNAVRDALLNMLPLAHPSPT-AEVCLYADASQAYWG 509          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A0G4J7Q9_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7Q9_PLABS)

HSP 1 Score: 200 bits (508), Expect = 4.060e-58
Identity = 113/291 (38.83%), Postives = 159/291 (54.64%), Query Frame = 1
Query:    4 DAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICAS-----------GYRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALME 843
            + FR  L  + P  V PM   LKQ  D +  + KPR Y P++  +L +   +L E G+VY N     AS           GYRL  D   +N +C     PM N E    K  G   F T+D  +G+W  PLA+E +E F+F+T D +FTPTR  QG MN+   F   M  +  ++     LI++DD+    +S E+L+  L  VL RC ER L L  +K  LFA+E+KWCG++YS   V+HDP+R+  L  M RP+T  +L +FL A NWMR  +P  A +V PL+  ++
Sbjct:   18 NEFRTRLGQDKPVDVEPMVTQLKQ--DATPYRCKPRFYNPKQKEFLDDMICMLKENGLVYMNMNSRWASPVLVVKKPKGDGYRLCVDLRQVNARCVPTAWPMPNVESVTRKLSGMTCFFTIDAFKGFWLMPLAKECQEIFSFMTDDAVFTPTRSIQGGMNSAVQFHARMAAIFDDMKENL-LIWIDDILGFAKSEEDLLHQLTRVLERCRERNLKLNPNKCTLFARELKWCGRIYSRDGVQHDPKRIEALTSMPRPKTAKDLQQFLWAANWMRTHVPGYASIVRPLQERLD 305          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A6A4Z9B8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9B8_9STRA)

HSP 1 Score: 212 bits (539), Expect = 8.680e-58
Identity = 126/358 (35.20%), Postives = 191/358 (53.35%), Query Frame = 1
Query:    4 DAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICASG-----------YRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGTS-RTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            D FR +L  + P  VAP+RVTLK  AD   V+ K R Y  E+  ++ +H E L   G+ Y NP+    S            +R+  D  P+N Q E +  PM   E+  +   GA  F T+D  +GYWQ  L E ++E F+F+T  G++TPTRV  G  ++ +Y Q  + E+  + + R+ LI++DD+    +S E L+  L  VL  C  RGL L   K   F  E +WCG++ S   V+HDPER++ L +++ P T  +L +F+ A NWMR+S+P    +V P+  L+E   K     T++K +   L D  W  + V    + ++ L   V L+  +P+     +F DASDL WG
Sbjct:  727 DVFRLSLGRDPPVDVAPLRVTLK--ADAEPVRCKARRYSKEQRDFMAKHVEELQAAGLCYRNPRSKWCSAPLIVKKPEANDFRMTVDVRPVNAQTERIIWPMPMLEVILDHLAGASVFFTLDFFKGYWQFALDEASQEMFSFLTDTGVYTPTRVLMGGTDSVAYCQSSVQEMFQDELYRSLLIWLDDLLGYDKSKEGLLAALERVLAICESRGLKLNPKKCRFFETEARWCGRILSSEGVKHDPERIKALQDLKMPVTGQDLQQFICAMNWMRMSIPKYNVIVQPITDLLESVYKAAGGHTRQKVAEVVLADVGWNAEHVACLTSCKDALGRVVTLAHPKPERL-ICVFADASDLHWG 1081          
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Match: A0A2P4XB16_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XB16_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.560e-57
Identity = 131/358 (36.59%), Postives = 191/358 (53.35%), Query Frame = 1
Query:    4 DAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEHFELLCETGMVYPNPQGICASG------------YRLVADFSPINGQCELVPGPMRNSEIEGEKCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMNATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCMERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVGELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGTSRTKRKASRRALMDGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG 1041
            D FR  L  + PA+V P+R+TL+  +D    +A+PR Y P +SA+L EH   L + G +  N   + A              +RL  D+ P+N     + G   +     E   GA  F   D   G+ Q PLA+++++  +F+T +G++TP+RVPQG M++  +FQ  M  V  N+     LI++DD+ +  RS +E    LR  L R  ERGL L+A K  LF KE KWCG L+SG  VR+DPER+ GL ++  P T  +L +FL AT  M  SL   + V+ PL   +E  LK   RTKR A+  A+    WT     A++ +R++L  +  L +   +    LM  DASD  WG
Sbjct:  178 DVFRIDLLADPPAKVEPLRITLR--SDAKPFRARPRRYSPAQSAFLSEHVRSLEKMGYIRRNNMSVWACAAVPVPKVNRPNEFRLTIDYRPVNAVTVPIAGTGSDLTSSSENVAGAYGFAGFDMPSGFSQLPLADDSQDSMSFITDEGVWTPSRVPQGAMDSPLHFQNQMNVVFENMQPTQVLIWIDDILLFARSPQEFTETLRRFLARVSERGLKLSAVKSFLFRKETKWCGWLFSGVGVRNDPERLSGLHQLPLPSTAADLEQFLCATGRMHNSLMDYSRVMQPLHDKLEAVLKVVGRTKRLAAGAAIT---WTAADTTAFETARQLLTTSQILHYPSQNASIVLM-SDASDRGWG 529          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig988.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE4.990e-9150.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE8.530e-9146.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE4.430e-7643.63CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A225VK89_9STRA2.530e-6136.31Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A0G4J7H8_PLABS1.280e-6036.54Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A6A3K6I0_9STRA2.020e-6035.75Reverse transcriptase domain-containing protein n=... [more]
A0A6G0QQ04_9STRA1.860e-5836.09Integrase catalytic domain-containing protein n=5 ... [more]
A0A0G4J7Q9_PLABS4.060e-5838.83Reverse transcriptase domain-containing protein n=... [more]
A0A6A4Z9B8_9STRA8.680e-5835.20Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A2P4XB16_9STRA1.560e-5736.59Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig988contigA-nodosum_M_contig988:167823..168896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog164328.Phyra85588
PFAMsRVT_1,rve
Model size1041
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.24e-62
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QEWS@4776|Peronosporales
Descriptiontransposition, RNA-mediated
Cds size1041
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870523.1082675-CDS-A-nodosum_M_contig988:167822..1686531680870523.1082675-CDS-A-nodosum_M_contig988:167822..168653Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig988 167823..168653 -
1680870523.122023-CDS-A-nodosum_M_contig988:168686..1688961680870523.122023-CDS-A-nodosum_M_contig988:168686..168896Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig988 168687..168896 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig988.7.1prot_A-nodosum_M_contig988.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig988 167823..168896 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig988.7.1

>prot_A-nodosum_M_contig988.7.1 ID=prot_A-nodosum_M_contig988.7.1|Name=mRNA_A-nodosum_M_contig988.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=347bp
FDAFRRALTGETPARVAPMRVTLKQGADLSQVKAKPRVYPPEKSAWLKEH
FELLCETGMVYPNPQGICASGYRLVADFSPINGQCELVPGPMRNSEIEGE
KCVGAVAFCTMDCLQGYWQCPLAEEAREYFTFVTKDGLFTPTRVPQGVMN
ATSYFQGMMMEVLGNLVGRACLIYVDDVKVIGRSVEELIVNLRAVLLRCM
ERGLFLAAHKLVLFAKEVKWCGKLYSGTTVRHDPERVRGLVEMRRPETVG
ELMKFLQATNWMRLSLPHMAEVVAPLRALMEHRLKGTSRTKRKASRRALM
DGDWTPKRVEAWDNSREMLMNAVALSFRRPDDCRALMFPDASDLFWG
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mRNA from alignment at A-nodosum_M_contig988:167823..168896-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig988.7.1 ID=mRNA_A-nodosum_M_contig988.7.1|Name=mRNA_A-nodosum_M_contig988.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1074bp|location=Sequence derived from alignment at A-nodosum_M_contig988:167823..168896- (Ascophyllum nodosum dioecious)
TTTGACGCGTTTCGGAGGGCCCTTACGGGTGAGACGCCAGCACGGGTGGC CCCCATGCGGGTGACGCTGAAACAAGGCGCGGATCTCTCGCAGGTGAAAG CCAAGCCGCGTGTGTATCCCCCTGAAAAGAGCGCCTGGCTTAAAGAGCAT TTTGAATTGCTCTGTGAGACAGGGATGGTGTACCCGAATCCGCAGGGGAT TTGTGCGAGTGTGGCGATGGCGTTCCCCAAGGGACCGGGCAAGGGATACC GTTTGGTGGCTGATTTTTCCCCCATTAACGGCCAGTGCGAGTTGGTGCCG GGACCGATGCGGAACTCTGAAATTGAAGGTGAGAAATGTGTTGGCGCCGT GGCTTTTTGTACTATGGACTGCCTTCAAGGTTACTGGCAGTGCCCGCTGG CGGAGGAGGCGCGTGAATATTTCACGTTCGTGACTAAAGATGGCCTGTTC ACGCCGACGCGCGTGCCGCAGGGAGTCATGAATGCTACGTCATACTTTCA GGGGATGATGATGGAGGTCTTAGGAAACCTAGTGGGGCGTGCCTGTTTGA TTTATGTGGATGACGTGAAGGTTATCGGGCGGTCCGTGGAGGAGCTGATA GTGAATCTGCGTGCGGTGCTGCTGCGGTGTATGGAGCGCGGTTTGTTTCT CGCGGCGCACAAGCTCGTACTGTTTGCGAAAGAGGTCAAATGGTGCGGCA AGCTATACTCGGGGACGACCGTCAGACACGACCCAGAGCGCGTGCGCGGA CTGGTGGAGATGCGCCGACCAGAGACGGTGGGCGAGCTGATGAAGTTTCT GCAGGCGACGAACTGGATGCGTTTGTCACTGCCTCACATGGCGGAAGTTG TGGCACCGCTGCGAGCGTTGATGGAACATCGACTGAAGGGAACAAGTCGA ACGAAAAGAAAAGCGTCGCGGCGGGCTCTAATGGATGGTGATTGGACGCC GAAGCGAGTGGAAGCCTGGGACAACTCCCGCGAGATGTTAATGAACGCGG TTGCTTTGAGCTTCCGGCGGCCGGACGACTGCCGCGCGTTAATGTTCCCG GATGCGAGCGACCTGTTTTGGGGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig988:167823..168896-

>mRNA_A-nodosum_M_contig988.7.1 ID=mRNA_A-nodosum_M_contig988.7.1|Name=mRNA_A-nodosum_M_contig988.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1041bp|location=Sequence derived from alignment at A-nodosum_M_contig988:167823..168896- (Ascophyllum nodosum dioecious)
TTTGACGCGTTTCGGAGGGCCCTTACGGGTGAGACGCCAGCACGGGTGGC
CCCCATGCGGGTGACGCTGAAACAAGGCGCGGATCTCTCGCAGGTGAAAG
CCAAGCCGCGTGTGTATCCCCCTGAAAAGAGCGCCTGGCTTAAAGAGCAT
TTTGAATTGCTCTGTGAGACAGGGATGGTGTACCCGAATCCGCAGGGGAT
TTGTGCGAGTGGATACCGTTTGGTGGCTGATTTTTCCCCCATTAACGGCC
AGTGCGAGTTGGTGCCGGGACCGATGCGGAACTCTGAAATTGAAGGTGAG
AAATGTGTTGGCGCCGTGGCTTTTTGTACTATGGACTGCCTTCAAGGTTA
CTGGCAGTGCCCGCTGGCGGAGGAGGCGCGTGAATATTTCACGTTCGTGA
CTAAAGATGGCCTGTTCACGCCGACGCGCGTGCCGCAGGGAGTCATGAAT
GCTACGTCATACTTTCAGGGGATGATGATGGAGGTCTTAGGAAACCTAGT
GGGGCGTGCCTGTTTGATTTATGTGGATGACGTGAAGGTTATCGGGCGGT
CCGTGGAGGAGCTGATAGTGAATCTGCGTGCGGTGCTGCTGCGGTGTATG
GAGCGCGGTTTGTTTCTCGCGGCGCACAAGCTCGTACTGTTTGCGAAAGA
GGTCAAATGGTGCGGCAAGCTATACTCGGGGACGACCGTCAGACACGACC
CAGAGCGCGTGCGCGGACTGGTGGAGATGCGCCGACCAGAGACGGTGGGC
GAGCTGATGAAGTTTCTGCAGGCGACGAACTGGATGCGTTTGTCACTGCC
TCACATGGCGGAAGTTGTGGCACCGCTGCGAGCGTTGATGGAACATCGAC
TGAAGGGAACAAGTCGAACGAAAAGAAAAGCGTCGCGGCGGGCTCTAATG
GATGGTGATTGGACGCCGAAGCGAGTGGAAGCCTGGGACAACTCCCGCGA
GATGTTAATGAACGCGGTTGCTTTGAGCTTCCGGCGGCCGGACGACTGCC
GCGCGTTAATGTTCCCGGATGCGAGCGACCTGTTTTGGGGA
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