mRNA_A-nodosum_M_contig986.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig986.7.1
Unique NamemRNA_A-nodosum_M_contig986.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.600e-89
Identity = 146/314 (46.50%), Postives = 198/314 (63.06%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQQKRLPGNKLGLPTRSQWVPSGVLRHGFSSA---------PKKSGEVSRREAIRKALADQGMVRPVHNISRNA 915
            +R++AG SY+D   + GVS  TA+  +W V+DAIN+T  VG   FPQ  + C + AA + +  +G  G   GVV A DGLFV+T AP    + N   YYS  K G+G NVQA    NYRF +++   PGSTND++A+  S      + LPPG++++GDAAYPL+++LLTPYPG+ L  D+D FNFYLSQLR+ +EQ+FGILV  WGILWKPLRV+F GR D++ A+FRLHNFLRDE+  P+ +       + +  R   +    L   FS+          P +SGEVS R+ I   L ++   RP HN+ RNA
Sbjct:  138 LRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTG--GAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKVTPIHRSEEDAEVVQV--RPHLLGDKTLPGTFSTTTKTTKDAQKPTRSGEVSTRKGITMMLDNKRQYRPKHNLVRNA 447          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 3.240e-85
Identity = 145/309 (46.93%), Postives = 191/309 (61.81%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQ----QKRLPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALADQGMVRPVHNISRNA 915
            + +LA  SY D++ + G+S +  YL +W VIDAINNT  VG   FP   + C + A  F    +   G    VV AVDGLF++ EAP   E+ N   YYS  K  +G NVQA+   +YRF  ++  +PGSTND+ A+  S+  K   +LP G+ +IGDAAYP+ E LLTPYPG++L A  D FNF+LSQLR+ +EQSFGILV TWGILW+PLRV+  GRAD++ A+F LHNFL+DE+  P+Q      R   N+  L      +P      G   AP +SGE   R AIRKAL  +   RP +N+ RNA
Sbjct:  144 LTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKSTD--GIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNFLQDEKVAPIQLSEEDSRSRLNRPALCATQHTLPDDW---GTEPAPSRSGETPARAAIRKALELKKQWRPDYNLQRNA 447          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 1.220e-84
Identity = 136/308 (44.16%), Postives = 196/308 (63.64%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPL---QQKRLPGNKLGLPTRSQWVPSGVLRHGFS-SAPKKSGEVSRREAIRKALADQGMVRPVHNISRN 912
            +R+LAG SY+D+  + G++  T +  +W V+DAINNT  VG   FPQ  E C + A  +    +G  G + G V A DGLFV+T AP+  ++ N   Y+S  K G+G N+QA    NYRF +++  + G+TND++A+  S   +   +LPPGY+++GDAAYPL++ LLTPYPGK L  D+D +NFYLSQLR+ +EQ+FGILV  WGILW+PLRV+F GR+ ++ A+FRLHN+LRDE+  P+   ++    G      T  + +P      G S   P +SG+V  R A+R  L ++   RP +N  RN
Sbjct:  135 LRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTG--GAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILVGQWGILWRPLRVQFAGRSALITALFRLHNYLRDEQVTPVHLTEEDGESGRDRPALTTERTLPESFQTSGDSLPKPTRSGDVPTRMALRMLLDNRRQYRPEYNRERN 440          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 4.230e-84
Identity = 137/312 (43.91%), Postives = 191/312 (61.22%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQQKRLPGNKLGLPTRSQWVPSGVLRHGFSSA----PKKSGEVSRREAIRKALADQGMVRPVHNISRNADLG 924
            +R+ AG SY+D+  + G++  + +  MW V+DAINNT  VG   FPQ  E C + A  +    +G  G   G V A DGLFV+T AP    + N   ++S  K G+G N+QA    NYRF +++    GSTND++A+  S       +LPPG++++GDAAYPL++ LLTPYPGK L  D+D FNFYLSQLR+ +EQ+FGILV  WGILW+PLRV+F GR+ ++ A+FRLHNFL DE+  P+      G+      R        L   F +A    P +SG+V+ R A+R  L ++   RP+HN+ RN   G
Sbjct:  132 LRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTG--GAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILVGQWGILWRPLRVQFAGRSGLITALFRLHNFLCDEKVKPVHMTEEDGDSAR--DRPNLTEEDTLPEDFQTASRGTPTRSGDVATRMALRMTLDNKRQYRPLHNVVRNEARG 439          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5JD50_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD50_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 4.870e-84
Identity = 142/309 (45.95%), Postives = 192/309 (62.14%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQ----QKRLPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALADQGMVRPVHNISRNA 915
            +R+LAGGSY D+  + G+S +  +  +W VIDAIN T  +G   FP   E C + A  F +  +   G    VV AVDGLF++ +AP   ++ N   YYS  K  +G NVQA+   +YRF  ++  +PGSTND+ A+  S+  K   +LP G+ +IGDAAYP+ E LLTPYPG+ L A  D FNF+LSQLR+ +EQSFGILV TWGILW+PLRV+F GRAD++ A+F LHNFL+DE+ +P+Q      R   N+  L    + +P G        AP +SGE   R AIR AL  +   RP +N  RN+
Sbjct:  141 LRILAGGSYWDVALMFGLSRAVTFDILWQVIDAINETPAIGAFDFPLTEEGCMRNANRFKEKSTD--GIFSWVVAAVDGLFIKAKAPYAKDTANVLAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQFAGRADLITALFHLHNFLQDEKVSPIQVAEEDSRSGRNRPALCATQRTLPDGWQTE--QPAPSRSGETPARAAIRTALELKKQWRPDYNRRRNS 445          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5JWD7_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD7_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 6.940e-84
Identity = 138/316 (43.67%), Postives = 196/316 (62.03%), Query Frame = 1
Query:    7 LLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQQKR-----------LPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALADQGMVRPVHNISRNADL 921
            +LAG SYLD+  + G++  T +  +W V+DAINNT  VG   FPQ  + C + A  +    +G  G   G V A DGLFV+T AP+  ++ N   Y+S  K G+G N+QA    NYRF +++  + G+TND++A+  S+      +LPPGY+V+GDAAYPL+++LLTPYPGK L  D D FNF+LSQLR+ +EQ++GILV  WGILW+PLRV+F GR+ ++ A+FRLHN+LRDE+  P+               L  N   LP   Q   +GV +      P +SG+V  R A+R  L ++   RP++N+ RN  L
Sbjct:    1 MLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTG--GVFSGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSSLSDSVARLPPGYYVLGDAAYPLSDHLLTPYPGKLLPRDEDSFNFHLSQLRVKIEQAYGILVGQWGILWRPLRVQFAGRSALITALFRLHNYLRDEQVKPVHMSEEDTETGRDRPHLTENDT-LPEDFQTTDTGVPK------PTRSGDVPTRLALRMLLDNRRQYRPLYNLQRNEAL 307          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5L3C4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C4_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 8.270e-83
Identity = 141/309 (45.63%), Postives = 190/309 (61.49%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQ----QKRLPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALADQGMVRPVHNISRNA 915
            +R+LAG SY D+  + G+S  T Y  +W VIDAIN T  VG   FP   E C + A  F +  +   G    VV AVDGLF++ +AP   ++ N   YYS  K  +G NVQA+   +YRF  ++  +PGSTND+ A+  S+  K   +LP G+ +IGDAAYP+ E LLTPYPG+ L    D FNF+LSQ+R+ +EQSFGILV TWGILW+PL V++ GRAD++ A+F LHNFL+DE+  P+Q      R   N+L L    + +P+G        AP +SGE   R AIR AL  +   RP +N  RN+
Sbjct:  181 LRILAGASYWDVALMFGLSVPTTYQILWSVIDAINKTRAVGAFDFPLTEEGCMRNANRFKEKSTD--GIFSWVVAAVDGLFIKAKAPCAKDTANVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRLLPPGEDSFNFHLSQVRVMIEQSFGILVATWGILWRPLHVQYGGRADLITALFHLHNFLQDEKVAPIQLAEEDSRSGRNRLALCATQRTLPAGWQTE--QPAPSRSGETPARAAIRTALELKKQWRPDYNRRRNS 485          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 3.600e-81
Identity = 138/292 (47.26%), Postives = 180/292 (61.64%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQQ-KRLPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALAD 873
            +R+LAG SYLD+  + G+   T Y  +W VIDAIN+T  VG   FPQ    CR  AA F   R    G     V  VDGLFV+T AP+  ++ N   YYS QK  +G NVQA+   +YRF +++   PG+TND++A+  S   +   +LP G++V+GDAAYPL+E LLTPYPGK L    D FNF+LSQLR+ +EQSFGILV TWGILW+PL+V F GR D++ A+FRLHNFLRDE+  P+        + LG P  S+           S  P +SGE   R A+R  L +
Sbjct:  131 LRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFK--RKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQVTPVHLCDEDEESGLGRPVLSRQGTLPPEWQSDSPKPSRSGETPTRAALRNLLVE 420          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5JVS1_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS1_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 5.030e-80
Identity = 138/309 (44.66%), Postives = 188/309 (60.84%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQ----QKRLPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALADQGMVRPVHNISRNA 915
            +R+LAG SY D++ + G+S +  Y  +W VIDAINNT  VG   FP   E C + A  F +  +   G    VV AVDGLF++ +AP   ++ N   YYS  K  +G NV A+   +YRF  ++  +PGSTND+ A+  S+  K   + P G  +IGDAAYP+ E LLTPYPG++L A  D FN +LSQL + +EQSFGILV TWGILW+PLR++  GRAD++ A+F LHNFL+DE+  P+Q      R   N+  +    + +P G    G   AP +SGE   R AIRKAL  +   R   N+ RN+
Sbjct:   44 LRILAGASYWDVLLMFGLSVAVTYQILWEVIDAINNTPAVGAFDFPLTEEGCMRNANRFKEKSTD--GIFSWVVAAVDGLFIKAKAPYAKDTANVLAYYSGSKSAYGINVPAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARFPAGIHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNSHLSQLLVKIEQSFGILVSTWGILWRPLRMQVGGRADLIIALFHLHNFLQDEKVAPIQLSEEDSRSGLNRPAICATQRTLPDGW---GTEPAPSRSGETPARAAIRKALELKKQWRRDFNLQRNS 347          
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Match: A0A6H5K9T7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T7_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 8.070e-78
Identity = 134/292 (45.89%), Postives = 179/292 (61.30%), Query Frame = 1
Query:    1 IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYSDQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLPPGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGILVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQ----QKRLPGNKLGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKA 864
            +R+LAG SY D+  + G+S  T Y  +W VIDAIN T  VG   FP   E C + A  F +  +   G    VV AVDGLF++ +AP   ++ N   YYS +K  +G NVQA+   +YRF  ++  +PGSTND+ A+  S+  K   +LP G+ +IGDAAYP+ E LLTP PG+ L    D FNF+LSQLR+ +EQSFGILV TWGI W+PLRV+F GRAD++ A+F LH+FL+DE+  P Q      R   N+  L    + +P+G        AP +SGE   R AIR A
Sbjct:   21 LRILAGASYWDVALMFGLSVPTTYQILWSVIDAINKTPAVGAFDFPLTEEGCVRNANIFKEKSTD--GIFSWVVAAVDGLFIKAKAPCAKDTANVIAYYSGRKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPSPGRLLPPGEDSFNFHLSQLRVKIEQSFGILVSTWGIQWRPLRVQFGGRADLITALFYLHHFLQDEKVAPNQLAEEDSRSGRNRPALCATQRTLPAGWQTE--QPAPSRSGETPARAAIRTA 308          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig986.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV75_9PHAE1.600e-8946.50DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KNZ9_9PHAE3.240e-8546.93DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JUE6_9PHAE1.220e-8444.16DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JDE6_9PHAE4.230e-8443.91DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JD50_9PHAE4.870e-8445.95DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JWD7_9PHAE6.940e-8443.67DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5L3C4_9PHAE8.270e-8345.63DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE3.600e-8147.26DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JVS1_9PHAE5.030e-8044.66DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5K9T7_9PHAE8.070e-7845.89DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig986contigA-nodosum_M_contig986:152025..153394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size927
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.89e-37
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size927
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870520.5034394-CDS-A-nodosum_M_contig986:152024..1527711680870520.5034394-CDS-A-nodosum_M_contig986:152024..152771Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig986 152025..152771 -
1680870520.6067677-CDS-A-nodosum_M_contig986:153214..1533941680870520.6067677-CDS-A-nodosum_M_contig986:153214..153394Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig986 153215..153394 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig986.7.1prot_A-nodosum_M_contig986.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig986 152025..153394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig986.7.1

>prot_A-nodosum_M_contig986.7.1 ID=prot_A-nodosum_M_contig986.7.1|Name=mRNA_A-nodosum_M_contig986.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=309bp
IRLLAGGSYLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSE
ACRQLAAGFTQARSGARGCLDGVVGAVDGLFVRTEAPATTESLNTNEYYS
DQKKGFGFNVQAIAGPNYRFMNLTVQNPGSTNDFSAFTPSAAWKLTQKLP
PGYFVIGDAAYPLAENLLTPYPGKRLDADRDVFNFYLSQLRMTVEQSFGI
LVQTWGILWKPLRVKFTGRADVVNAVFRLHNFLRDEEFNPLQQKRLPGNK
LGLPTRSQWVPSGVLRHGFSSAPKKSGEVSRREAIRKALADQGMVRPVHN
ISRNADLG*
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mRNA from alignment at A-nodosum_M_contig986:152025..153394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig986.7.1 ID=mRNA_A-nodosum_M_contig986.7.1|Name=mRNA_A-nodosum_M_contig986.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1370bp|location=Sequence derived from alignment at A-nodosum_M_contig986:152025..153394- (Ascophyllum nodosum dioecious)
ATTCGACTCCTAGCGGGCGGATCATACTTGGATTTAGTGGATATTCACGG TGTCAGCACATCAACTGCGTACTTGTGCATGTGGTGCGTCATTGACGCCA TCAACAACACAACAGGCGTCGGCGACATGTGCTTCCCGCAGGACTCAGAG GCTTGCCGGCAGCTGGCGGCGGGGTTCACGGTAAGACAGTGTGTTTGTTT TTGTACGTCGTAGTTTTAAGTCCAGGCAACGGTCGAAGGGGAGGCGTTGG GTGATGTTCGCAGTGCTGTATTTCGGCCTCGATCGGATGTTGCTTCCTCG TTGAGGGCACAGTACAATATTTTGATTCAAAGAGCCATTACAAGCAAACA CTTGTGGAGGGAAACCTAGTTTCCCGGACTTATTCGCCAGTGCGGTTCTG ACGGTTTTTTTTCGGCTTATCTCGGTGTGCTGCTCGGGACCTACCGCATG CTTTCGTACAAAGTACGTTTTTTCATGCTACTTGATCGGTCAAATGACGT GTACATCGCTCAAGAAACGATTCCCAGGGAATGCTTTTCGCAAGTGGACA GGTATATTCGTGAGAGTTCCGAACAACCCGAATGTTTTAACTCAAGACGA GTATTTTTTTTGTTGGCGTCGAGCAGGCAAGGAGCGGTGCTCGGGGTTGC CTCGATGGCGTCGTCGGAGCTGTTGACGGGCTCTTCGTAAGGACTGAGGC ACCGGCAACCACCGAGAGCCTGAACACCAATGAATACTACTCGGACCAGA AGAAGGGGTTCGGGTTCAACGTCCAGGCAATTGCTGGACCTAATTACCGC TTCATGAACCTCACAGTGCAGAATCCTGGTTCGACGAACGACTTCTCCGC TTTCACTCCTTCAGCGGCGTGGAAACTTACGCAGAAACTACCTCCTGGAT ACTTTGTAATCGGCGACGCTGCGTATCCTCTAGCAGAAAACCTCCTCACC CCATACCCCGGCAAGAGATTGGACGCAGATCGTGATGTTTTCAACTTCTA TTTGAGCCAGCTGCGCATGACCGTCGAGCAGAGCTTTGGCATCCTCGTCC AAACATGGGGTATCCTGTGGAAACCCCTCAGAGTGAAGTTCACCGGACGC GCAGACGTTGTGAATGCCGTCTTTCGCCTCCACAATTTCCTGCGTGACGA GGAGTTCAACCCATTACAGCAGAAGAGGCTGCCTGGGAACAAACTGGGCC TCCCCACTCGATCGCAATGGGTGCCTTCCGGAGTACTTCGTCACGGATTT TCATCTGCCCCCAAGAAGAGCGGCGAGGTATCGAGGCGAGAAGCGATCCG AAAGGCGCTTGCAGACCAAGGCATGGTTCGACCAGTCCACAATATCTCCC GCAACGCTGATCTGGGATGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig986:152025..153394-

>mRNA_A-nodosum_M_contig986.7.1 ID=mRNA_A-nodosum_M_contig986.7.1|Name=mRNA_A-nodosum_M_contig986.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=927bp|location=Sequence derived from alignment at A-nodosum_M_contig986:152025..153394- (Ascophyllum nodosum dioecious)
ATTCGACTCCTAGCGGGCGGATCATACTTGGATTTAGTGGATATTCACGG
TGTCAGCACATCAACTGCGTACTTGTGCATGTGGTGCGTCATTGACGCCA
TCAACAACACAACAGGCGTCGGCGACATGTGCTTCCCGCAGGACTCAGAG
GCTTGCCGGCAGCTGGCGGCGGGGTTCACGCAGGCAAGGAGCGGTGCTCG
GGGTTGCCTCGATGGCGTCGTCGGAGCTGTTGACGGGCTCTTCGTAAGGA
CTGAGGCACCGGCAACCACCGAGAGCCTGAACACCAATGAATACTACTCG
GACCAGAAGAAGGGGTTCGGGTTCAACGTCCAGGCAATTGCTGGACCTAA
TTACCGCTTCATGAACCTCACAGTGCAGAATCCTGGTTCGACGAACGACT
TCTCCGCTTTCACTCCTTCAGCGGCGTGGAAACTTACGCAGAAACTACCT
CCTGGATACTTTGTAATCGGCGACGCTGCGTATCCTCTAGCAGAAAACCT
CCTCACCCCATACCCCGGCAAGAGATTGGACGCAGATCGTGATGTTTTCA
ACTTCTATTTGAGCCAGCTGCGCATGACCGTCGAGCAGAGCTTTGGCATC
CTCGTCCAAACATGGGGTATCCTGTGGAAACCCCTCAGAGTGAAGTTCAC
CGGACGCGCAGACGTTGTGAATGCCGTCTTTCGCCTCCACAATTTCCTGC
GTGACGAGGAGTTCAACCCATTACAGCAGAAGAGGCTGCCTGGGAACAAA
CTGGGCCTCCCCACTCGATCGCAATGGGTGCCTTCCGGAGTACTTCGTCA
CGGATTTTCATCTGCCCCCAAGAAGAGCGGCGAGGTATCGAGGCGAGAAG
CGATCCGAAAGGCGCTTGCAGACCAAGGCATGGTTCGACCAGTCCACAAT
ATCTCCCGCAACGCTGATCTGGGATGA
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