mRNA_A-nodosum_M_contig980.8.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig980.8.1
Unique NamemRNA_A-nodosum_M_contig980.8.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 6.280e-45
Identity = 102/281 (36.30%), Postives = 158/281 (56.23%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPLVV--LRKAFCAFWREQ-SLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQR 861
            VLYPLLMFVT +RT+ +RV PN  L+F+ + E      +P     L   F + W E  SLF  AD GQWETV+   D Q+  E +WFRIGFEP+F DYTK GTWF+++SL EW A A V  +  +N VV+L L   +   +   +++L+PF N V+N +E  + A++ I++ + A SA+ +E   +   + +    LQ+  L   ++P+ ++ V I+ G  R        +   ++T  E++  +  +  YT R+W   W  M+  N  AC  DT  G+++
Sbjct: 1436 VLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTP-DRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVM-IENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTD-EEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRK 1713          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.430e-43
Identity = 102/281 (36.30%), Postives = 156/281 (55.52%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASP--LVVLRKAFCAFWREQ-SLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQR 861
            VLYPLLMF T  RT+ +RV P+E L+F+ ++E      +P         F + W E  SLF  AD GQWETV+   +  +  E +WFRIGFEP+F DYTK GTWF+++SL EW + A V  +  DN  V+L L   +Q A+ + ++ L+PF N V+N +   +VA++ +   L AV+A+ +E   +   V S    LQ+  L   ++P+ ++ V I+ G  RK       +  +Q+T  E    +  +  +T R+W   W  M+  N  AC  DT  G+++
Sbjct: 1658 VLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTP-NRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVM-IDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLT-GESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRK 1935          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 3.560e-43
Identity = 100/281 (35.59%), Postives = 154/281 (54.80%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPLVV--LRKAFCAFWREQ-SLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQR 861
            VLYPLLMF T  RT+ +RV P+E L+F+ ++E      +P         F + W E  SLF  AD GQWETV+   +  +  E +WFRIGFEP+F DYTK GTWF+++SL EW + A V  +  DN  V+L L   +Q A+ + ++ L+PF N V+N +   +VA++ ++  L AV+A+ +E   +   V S    LQ+  L   ++P+ ++ V I+ G  R        +  +Q    E    +  +  +T R+W   W  M+  N  AC  DT  G+++
Sbjct: 1617 VLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTP-NRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVM-IDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRK 1895          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.830e-34
Identity = 103/300 (34.33%), Postives = 148/300 (49.33%), Query Frame = 1
Query:    1 VLIPSTVIFVLYPLLMFVTTWRTIRLRVHPNEFLVFRY------------FNEGY-ATNASPLVVLRKAFCAFWREQ-SLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQ 858
            V+I + +  V YP+LMFV   RT  +RV PN  +VF                EG  A +AS L  +R    A W E  SLF  A+ G WET     +E  + E  WFRIGFEP+F D+TKSG WFV  +L EW A  C+  L  D  V++L+L  A+     + ++  RPF N V+N +   LV ++ + +AL AVSA  +E       V SV   LQ+  L   I+P+ ++  +I+ G  R           + +    +K     V  +  R W   W  M+ +N  AC +DT  G++
Sbjct: 1068 VMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVR----AGWEEDHSLFAWANKGTWETAE-TDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGAL-IDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIR 1361          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 4.540e-33
Identity = 91/277 (32.85%), Postives = 145/277 (52.35%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPLVVLRKAFCAFWREQSLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQ 858
            VLYPLLM V   RT R+ V P+  +VF       A    P   L +       + SLF  AD GQWETV+   D+  +   +WFRIGFEP+F D+T++G+WF++ +L E    A +A L  DN  ++  L  A+     V ++  +PF N V+N +  +++  + + + + A++A  +        + +    +Q   + V ++PL V+  V I+G+ R   G+V +R   +   AE +  +R+    TLR W  AWF MV  N  AC+ DT  G++
Sbjct:  407 VLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPST-LSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKA-DWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLV-DNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERE-NEADRAEREVTKRL----TLRLWGRAWFRMVFSNMFACLRDTREGIR 675          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 9.500e-33
Identity = 89/283 (31.45%), Postives = 148/283 (52.30%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNE--GYATNAS-PLVVLRKAFCAFWREQSLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQI--TPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQR 861
            V+YP+LM + ++RT R+RV P+  +VF+   E   + T+ + P   L K       + S+F  A+TG WETV    DE+   E + FRIGFEP+F D+TK  +WF +  L E    AC A L  D+ VV+L L   +     + ++  RPF N ++N +   L  ++  ++A+ A +A  ++   + + + +    LQ+  LV  I+P+ ++   +I G  R+   ++ +        T  E K  ++ +  Y  R W P W  M+  N +AC+ DT RG +R
Sbjct:  303 VVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETP-DEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLV-DDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRR 583          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.320e-32
Identity = 96/281 (34.16%), Postives = 146/281 (51.96%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPLVV--LRKAFCAFWREQ-SLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQR 861
            VL PLLMFVT +RT+ +RV PN  L+F+ + EG  +  +P         F + W E  SLF  AD  QWET +   D Q+  E +W RIGFEP+F +YTK GTWF+++SL EW A A V  +  +N +V+L L   +   + + +++L+PF N V N +E  + A++ I++ + A SA+ +E  G  R     A+ L  + +V+ +L L  E                 +R AR             +  YT R+W   W  ++  N  AC  DT  G+++
Sbjct:  456 VLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTP-DRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMV-ENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWE--GTDR-----AAHLNTSVVVLQLLSLFDE-----------------EREARDY-----------IRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRK 699          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 5.600e-28
Identity = 79/262 (30.15%), Postives = 133/262 (50.76%), Query Frame = 1
Query:   73 RLRVHPNEFLVFRYFNEGYATNASPLVVLRKAFCAFWREQSLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQ 858
            R+RV  +  +VF   N+    +     +  K      ++ SLF  AD G W TV+   DE  + + +WFRIGFEP++ D+T++G+WF + +L EW   AC+A L  DN  V+  L  A+     + ++  +PF N V+N +  +++  + + + + A+SA  +        +  V    Q   + V ++PL V+ +++++G  R   G V + R      AE + + R     TLR W   WF MV  N  AC+ DT  G++
Sbjct:  377 RVRVRSDALIVFTS-NKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTA-DEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLV-DNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPV-KTRDNAAQRAEREFINRR----TLRLWGRTWFNMVGSNVFACVRDTREGIR 630          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.020e-24
Identity = 90/324 (27.78%), Postives = 140/324 (43.21%), Query Frame = 1
Query:    1 VLIPSTVIFVLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPLVVLRKAFCAFWREQSLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFE------------------WFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNK--------------------VVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVASTLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTVQRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQ 858
            V+I + +  V YP+LMFV   RT  +RV PN                +P+V L K    +  + SLF  A+ G WET     +E ++ E  WFRIGFEP+F D+TKSG WFV  +L E                  W A  C+  L  D  V++L+L  A+     + ++  RPF N+                    V+N +   LV ++ + +AL AVSA  +E       V S    LQ+      I+P+ ++  +++    R           + +    +K     V  +  R W   W  ++ +N  AC +DT  G++
Sbjct:  209 VMIAAGLALVFYPILMFVAVLRTFFVRVRPN----------------TPIVFLSKVRAGWEEDHSLFAWANKGTWETAE-TDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGAL-IDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIR 514          
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 9.040e-22
Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 1
Query:   28 VLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPLVVLRKAFCAFWREQSLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPMFTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVTILWLRPFVNK 480
            V YP+LM     RT R+RV  +  +VF   NE    +     +  K      ++ SLF  AD GQWETV+   DE  +   +WFRIGFEP+F D+T++G+WF++ +L EW   AC+A L  DN  V+  L  AI     + ++  +PF N+
Sbjct:  240 VFYPVLMVAMVVRTHRVRVRSDALIVFTS-NESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQTT-DEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLV-DNTAVQCGLFCAIHSMTFILLVACKPFANR 387          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig980.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FWS4_ECTSI6.280e-4536.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD90_9PHAE1.430e-4336.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG6_ECTSI3.560e-4335.59Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LN93_ECTSI3.830e-3434.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9C2_9PHAE4.540e-3332.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L9_ECTSI9.500e-3331.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR60_9PHAE2.320e-3234.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ3_9PHAE5.600e-2830.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV63_9PHAE2.020e-2427.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5F3_ECTSI9.040e-2238.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig980contigA-nodosum_M_contig980:32117..35677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIK9
Model size1140
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons6
Evalue6.6e-16
EggNOG OGsKOG3544@1|root,KOG3544@2759|Eukaryota
Descriptionstructural constituent of cuticle
Cds size1140
COG categoryD
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig980.8.1prot_A-nodosum_M_contig980.8.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig980 32117..35677 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870514.1317103-CDS-A-nodosum_M_contig980:32116..325331680870514.1317103-CDS-A-nodosum_M_contig980:32116..32533Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig980 32117..32533 -
1680870514.1511652-CDS-A-nodosum_M_contig980:32837..329321680870514.1511652-CDS-A-nodosum_M_contig980:32837..32932Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig980 32838..32932 -
1680870514.1705687-CDS-A-nodosum_M_contig980:33329..334781680870514.1705687-CDS-A-nodosum_M_contig980:33329..33478Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig980 33330..33478 -
1680870514.1886415-CDS-A-nodosum_M_contig980:33799..339241680870514.1886415-CDS-A-nodosum_M_contig980:33799..33924Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig980 33800..33924 -
1680870514.2028697-CDS-A-nodosum_M_contig980:34802..351291680870514.2028697-CDS-A-nodosum_M_contig980:34802..35129Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig980 34803..35129 -
1680870514.2156513-CDS-A-nodosum_M_contig980:35650..356771680870514.2156513-CDS-A-nodosum_M_contig980:35650..35677Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig980 35651..35677 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig980.8.1

>prot_A-nodosum_M_contig980.8.1 ID=prot_A-nodosum_M_contig980.8.1|Name=mRNA_A-nodosum_M_contig980.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=380bp
VLIPSTVIFVLYPLLMFVTTWRTIRLRVHPNEFLVFRYFNEGYATNASPL
VVLRKAFCAFWREQSLFVGADTGQWETVRIVGDEQLQSEWNWFRIGFEPM
FTDYTKSGTWFVLVSLFEWFATACVATLEFDNGVVELALLLAIQMALLVT
ILWLRPFVNKVVNVLETLLVAMNVITVALEAVSAIVYEEIGQPRWVGSVA
STLQVTGLVVFILPLLVEVVVIIFGVARKLSGAVCQRRARQITPAEDKTV
QRMVLFYTLRKWVPAWFVMVHRNSVACITDTWRGLQRSSQPGSDSNYHAA
DIHVDESFNGNWPNKDFGRPYKHVNDKGNLPVDQNFDAGLSNANCTAENR
KGEEKTSIGTQEAKGYHLPPWSGKRGSGRV
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mRNA from alignment at A-nodosum_M_contig980:32117..35677-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig980.8.1 ID=mRNA_A-nodosum_M_contig980.8.1|Name=mRNA_A-nodosum_M_contig980.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3561bp|location=Sequence derived from alignment at A-nodosum_M_contig980:32117..35677- (Ascophyllum nodosum dioecious)
GTCTTAATCCCTTCAACTGTAATATTTGTGAGCCCACCTATTATAGTGCC TGTTTATGAGTCACTTTTCCAGGAGACTTTACGTAAGCTAGCGCGAGTCG TGGTTAAAAGCCTATGCCACCCGTCAATAGTCCATCCATCCGGTCAATGC ATTCGTATAGTACAACATGCGAAGAGCGCAAACATGGAGTTTATTTGGGC TCATTCAGCGCCCCTTCCTCACCTACCCTCTAGCTCTGACTTGTTCGATG GTGGTAGCTAGTCCGTCGTGCGAAAAACTAACACTCGACACGTTATATAA TATGGCTGTGTTTACTTGCTTGCTCTTTCTCCTTGCATCGTTGGTCCGAC CCGTTGGACGTGAAGCTCTTGAGTGGTACAAACAAAATACGCCCTGTCAA GTTGCAATTTCATGAACAGAAATAACTCGTTTATTGAGGCGTCAGGCTGT GGTAGAAGAGATCTTCTCCTCGCTCTACGGTTGGATCATAATTCCCGCGT AACGCTCCTGTATTGAAATTCCGATGCGTTCATGTCTCGATCGGCCAGGT TCTCTACCCCTTGCTGATGTTCGTCACTACGTGGCGCACCATAAGACTCC GGGTCCACCCCAACGAATTCTTGGTCTTTCGTTACTTCAACGAAGGTTAC GCCACCAACGCGTCACCCCTTGTTGTACTGAGAAAAGCATTCTGCGCTTT CTGGAGGGAACAAAGTCTTTTTGTGGGGGCGGACACAGGCCAATGGGAGA CGGTGCGGATCGTTGGGGATGAACAGCTCCAATCCGAGTGGAACTGGTTT CGGATTGGCTTCGAGCCGATGTTCACGGACTACACCAAGTCCGGGACGTG GTTCGTCTTGGTCTCGCTTTTTGAGGTGAGAGGCATCCCTGATAGATACT GTATCTTCATATTATTTGATCTCCTATTCCAGTCTGTTTTTTTTAGCGAT GGAACCACTCTAGTTGAAGGGAACCACTCTAGTTCAAGTCACATGTAAAA TCATTTTCTACCCCCGCATCCCCCCTTGAAAAAAAACACGTTATGTATCG ATCGTAAGCAAAAAATACTGTAAGAAGTACTACAGTGCAAAACACCTGAA AAAAATGAAAGTTGACCCGATCAACATGATAACAAAGAATTCATATATGC CATACAATCTGACAATAATAGCTACCTGGTATTATTATACCTGGTAGTTC TTTTTGTCAGATACTCTTCTCAAATGAAATTCTAGACGCCGTTCTTTCGA CAACTAGGAGCCGAACAACAGTAGCTAATTGAACAATCTACGACATGAAC TGGTACTCATACTTACAGCTATTTTCTCTTTGTGAGAAAAACACTTGTTA TGCCTTGATGTCCCCACATCATAATTATTACCGATGTCATGTGTTTTATC ACAATGTTGGTAAATGTGCCCCCTTTCTTCTATATTTTGTTTCCTGACTT GGTGACTTGCTTGTGGGCGGCGTCTCACGAGCTCCAATCGGCTTCAGGGC ACGGCAAGAACACTGACATCTGTACCGGGAGCTTGTTAGTCAACTATCGC CACTGATAATCGGCATATATTGTATGGAAAAGTGCAGCGGAAGACGCCAG TCATTCCTTTCCAAACTAAAGAGGCAGTGACGTCTAGAAGCGCTGCGGCG GTTATGCCAAGCAATATCGGATCTGTTGTTGGAAACAGTCGAAAAGCTTT GAGCTACGAAACATCGTCTTCATTTGTCTGGTTGCCGTTGTTCGCGGATG CAGTGGTTTGCTACAGCGTGCGTTGCGACTCTGGAGTTCGACAACGGCGT GGTGGAGCTGGCCCTGCTGCTCGCCATCCAGATGGCTTTGCTTGTCACCA TTCTATGGCTCCGACCATTCGTCAACAAGTGAGAAACCATGCTTGTTTTG AAAGACAGATACAAATGCCTCGAGGTCTGGTGCGTCCCTCTTCCCGCTGT GATGACAAACGGTAGCTCGCCATTCTACCAAACGCCGTAGACTTGATTCA GTAGCTCTTTGAGCTGAATCTTCTCTACCTTCTGCAGAGTTCTCCGGTAT ATGATGAAGCGTCAGCGCGTCGAGGTCACAGGCGACGGCGGTGCTTCCTA GTAAGCCTTAGACCACGAGAAGATATTAAAAGGGGATTTCCCTTGCAGCA CGTCTGAAATAATCTGTCTCTCGTTTGACCGAGAACTGACGCTTCCCAGG GTAGTCAACGTGCTGGAAACGCTTCTTGTGGCCATGAACGTCATCACAGT GGCACTTGAGGCCGTATCTGCCATTGTCTACGAGGAAATCGGACAACCGC GGTGGGTCGGCTCAGTCGCATCCACTCTGCAAGTCACGGGGCTAGTCGGT AAGTGGTGCGGAAGACGGAGAGTGCACGCTGTAGACTCGGGTAACCCAAC CCCATTGCTCCATTTTCACTGTACATTAGATCGAACGAAAATCAAACAGC CGCTTATGACACAAGGAGATCTGAGCTAAGGACTCGGCATCTCAAACCAT TTGTCCCTCACATATGAACACATCAATCACCCCGCAGGCTAACATTGAGC AAACGACGATAAAGCGCGAAGACCCTTCAACTCTCTCGCGTACAAAAGCA CTTATTGTATATCTGGAGGCACGTCGTACAATAGACTGTAAGTCGACCAC CGCCCTTGTGGTTGCATGTATAGTAAATCCCAAACCATCCCATCTCTTCC TCGTCCATTGCCTGGTGATTTCGCCTTTCAACTTGACGATGACAGTTTTT ATTCTACCTCTGTTGGTGGAAGTGGTGGTGATAATCTTTGGTGTCGCACG CAAGCTGTCGGGTGCGGTTTGTCAGCGGCGCGCGAGACAGGTACGCTTTG TTCACTCCCAAAGCGTCAGTGCTTTCCTGACGAGCCAAGCAAAAGAGCCG AGGAAATGAAACTGTCTAAACATAACTGATGCATTGGTCCAGTCCCATAA CCGAACCAATGTTTCCGATATTGTATCATGGACAGGGTCTACCTGCTGTG CAATGCCTTGAGATGGGTTCGAGATCTCTACTGTAGACACCTTCCGTCAT ATACCAACATAAAGTGCGTATCCAGGCCTAGTTCATGCCAGCGCGACTCT TTTCTTCAAGGTTTCCTCGACTATATTCTTGTTGAACTTGACAGATCACC CCTGCTGAAGATAAGACAGTCCAACGCATGGTGCTCTTTTACACGCTGCG CAAGTGGGTACCCGCCTGGTTTGTCATGGTTCACCGCAACAGTGTCGCTT GTATTACAGACACGTGGCGGGGGCTTCAGAGATCCAGCCAACCTGGATCC GATAGCAACTACCATGCGGCCGATATACACGTCGATGAAAGCTTCAATGG TAATTGGCCAAACAAGGATTTCGGGCGACCGTACAAACACGTAAACGATA AGGGGAACCTTCCCGTCGATCAGAATTTCGATGCCGGCTTGTCGAACGCC AATTGTACGGCAGAAAATCGGAAGGGCGAAGAGAAAACATCGATCGGTAC ACAAGAAGCCAAGGGATATCATTTACCGCCGTGGAGCGGCAAGCGAGGCT CAGGGCGAGTC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig980:32117..35677-

>mRNA_A-nodosum_M_contig980.8.1 ID=mRNA_A-nodosum_M_contig980.8.1|Name=mRNA_A-nodosum_M_contig980.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at A-nodosum_M_contig980:32117..35677- (Ascophyllum nodosum dioecious)
GTCTTAATCCCTTCAACTGTAATATTTGTTCTCTACCCCTTGCTGATGTT
CGTCACTACGTGGCGCACCATAAGACTCCGGGTCCACCCCAACGAATTCT
TGGTCTTTCGTTACTTCAACGAAGGTTACGCCACCAACGCGTCACCCCTT
GTTGTACTGAGAAAAGCATTCTGCGCTTTCTGGAGGGAACAAAGTCTTTT
TGTGGGGGCGGACACAGGCCAATGGGAGACGGTGCGGATCGTTGGGGATG
AACAGCTCCAATCCGAGTGGAACTGGTTTCGGATTGGCTTCGAGCCGATG
TTCACGGACTACACCAAGTCCGGGACGTGGTTCGTCTTGGTCTCGCTTTT
TGAGTGGTTTGCTACAGCGTGCGTTGCGACTCTGGAGTTCGACAACGGCG
TGGTGGAGCTGGCCCTGCTGCTCGCCATCCAGATGGCTTTGCTTGTCACC
ATTCTATGGCTCCGACCATTCGTCAACAAGGTAGTCAACGTGCTGGAAAC
GCTTCTTGTGGCCATGAACGTCATCACAGTGGCACTTGAGGCCGTATCTG
CCATTGTCTACGAGGAAATCGGACAACCGCGGTGGGTCGGCTCAGTCGCA
TCCACTCTGCAAGTCACGGGGCTAGTCGTTTTTATTCTACCTCTGTTGGT
GGAAGTGGTGGTGATAATCTTTGGTGTCGCACGCAAGCTGTCGGGTGCGG
TTTGTCAGCGGCGCGCGAGACAGATCACCCCTGCTGAAGATAAGACAGTC
CAACGCATGGTGCTCTTTTACACGCTGCGCAAGTGGGTACCCGCCTGGTT
TGTCATGGTTCACCGCAACAGTGTCGCTTGTATTACAGACACGTGGCGGG
GGCTTCAGAGATCCAGCCAACCTGGATCCGATAGCAACTACCATGCGGCC
GATATACACGTCGATGAAAGCTTCAATGGTAATTGGCCAAACAAGGATTT
CGGGCGACCGTACAAACACGTAAACGATAAGGGGAACCTTCCCGTCGATC
AGAATTTCGATGCCGGCTTGTCGAACGCCAATTGTACGGCAGAAAATCGG
AAGGGCGAAGAGAAAACATCGATCGGTACACAAGAAGCCAAGGGATATCA
TTTACCGCCGTGGAGCGGCAAGCGAGGCTCAGGGCGAGTC
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