mRNA_A-nodosum_M_contig98.68.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig98.68.1
Unique NamemRNA_A-nodosum_M_contig98.68.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: D8LK52_ECTSI (Lactoylglutathione lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK52_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 1.490e-109
Identity = 143/165 (86.67%), Postives = 152/165 (92.12%), Query Frame = 1
Query:   13 GIDDAICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFSAD 507
            GIDDAIC TP PSTKDFIMQQTMLRIK+P  SLDFYTR+LGMRL+QELHF+EWEFSIYFVGYC  ++IP D KERTRWCFQQAGA+ELTHNWGTEND  LKYHSGNEDPRGFGHIGITVPDVY ACERFEKEGV+FRKTPDGGNMKGLAFIFDPDGYSIE+  AD
Sbjct:   13 GIDDAICNTPDPSTKDFIMQQTMLRIKNPHSSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQAGAVELTHNWGTENDAALKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEILGAD 177          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: A0A6H5KMV4_9PHAE (Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV4_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 5.740e-101
Identity = 134/152 (88.16%), Postives = 142/152 (93.42%), Query Frame = 1
Query:   13 GIDDAICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIF 468
            GIDDAIC TP PSTKDFIMQQTMLRIK+P  SLDFYTR+LGMRL+QELHF+EWEFSIYFVGYC  ++IP D KERTRWCFQQAGA+ELTHNWGTEND DLKYHSGNEDPRGFGHIGITVPDVY ACERFEKEGV+FRKTPDGGNMKGLAFIF
Sbjct:   61 GIDDAICNTPDPSTKDFIMQQTMLRIKNPHLSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPADPKERTRWCFQQAGAVELTHNWGTENDADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIF 212          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: A0A8K0KI60_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KI60_LADFU)

HSP 1 Score: 241 bits (616), Expect = 3.720e-79
Identity = 108/160 (67.50%), Postives = 126/160 (78.75%), Query Frame = 1
Query:   25 AICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFSA 504
            A C  P PSTKDF+ QQTM RIKDP+KSLDFYTR+LGM L+Q+L F   +FSIYF+G+  +ADIP D KE+  W   +   LELTHNWGTE+DPD KYH+GN DPRG+GHIGI VPDVY ACERFEK GV+F K PD G MKG+AFI DPDGY IE+F+A
Sbjct:   14 ACCSDPDPSTKDFLFQQTMYRIKDPRKSLDFYTRVLGMTLIQKLDFPSMKFSIYFMGFENKADIPADPKEQVVWALSRKATLELTHNWGTESDPDAKYHNGNSDPRGYGHIGIMVPDVYQACERFEKLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFNA 173          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: A0A1B6BWJ1_9HEMI (Lactoylglutathione lyase n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6BWJ1_9HEMI)

HSP 1 Score: 239 bits (609), Expect = 4.330e-78
Identity = 106/161 (65.84%), Postives = 128/161 (79.50%), Query Frame = 1
Query:   22 DAICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFSA 504
            +++CK P PSTKDFIMQQTM RIKDP+KSL FYT++LGMRLLQ+L F E +FS+YF+GY +  DIP D K+RT W   +   +ELTHNWGTENDPD KYH+GN DPRGFGHIG+ VPDV  AC+RFE  GV+F K P  G MKG+AFI DPDGY IE+F++
Sbjct:   13 NSLCKDPDPSTKDFIMQQTMYRIKDPRKSLPFYTQVLGMRLLQKLDFPEMKFSLYFMGYEKGEDIPTDYKDRTAWAMSRKATIELTHNWGTENDPDCKYHNGNSDPRGFGHIGLMVPDVNEACKRFESLGVEFVKKPSDGKMKGIAFIKDPDGYWIEIFNS 173          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: A0A6A4WGT3_AMPAM (Lactoylglutathione lyase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WGT3_AMPAM)

HSP 1 Score: 236 bits (602), Expect = 4.400e-77
Identity = 107/160 (66.88%), Postives = 127/160 (79.38%), Query Frame = 1
Query:   25 AICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLK-YHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFS 501
            A C  P PST DFIMQQTM RIKDPK SL+FYTR+LGMRLL++  F E +FS+YF+GY  + DIP D+KERT+WCF +   +ELTHNWGTE+DPD K YH+GN DPRGFGHIG+ VPDV  ACERFEK GV+F K P+ G MKGLAF+ DPDGY IE+ +
Sbjct:   10 AACAEPDPSTADFIMQQTMYRIKDPKASLNFYTRVLGMRLLKKFDFPEAKFSLYFMGYEAKEDIPTDEKERTKWCFSRRATIELTHNWGTESDPDFKGYHNGNSDPRGFGHIGLAVPDVEAACERFEKLGVKFVKKPNEGRMKGLAFVQDPDGYWIEILN 169          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: A0A1I8NAP6_MUSDO (Lactoylglutathione lyase n=6 Tax=Calyptratae TaxID=43742 RepID=A0A1I8NAP6_MUSDO)

HSP 1 Score: 236 bits (601), Expect = 6.680e-77
Identity = 105/162 (64.81%), Postives = 126/162 (77.78%), Query Frame = 1
Query:   22 DAICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFSAD 507
            D +CK   PSTKDF+ QQTM RIKDP+KSL FY+ +LGM LLQ+L F   +FS+YF+GY   A++P D KERT+W   +   +ELTHNWGTENDPD  YH+GN DPRGFGHIGI VPDVY AC+RFE+ GV+F K PD G MKGLAFI DPDGY IE+F+A+
Sbjct:   13 DELCKPADPSTKDFLFQQTMYRIKDPRKSLPFYSGVLGMTLLQKLDFPAAQFSLYFMGYENPAEVPKDTKERTKWAMSRKATVELTHNWGTENDPDQSYHNGNSDPRGFGHIGIMVPDVYAACKRFEELGVEFVKKPDDGRMKGLAFIKDPDGYWIEIFNAN 174          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: UPI001B88A26C (lactoylglutathione lyase-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A26C)

HSP 1 Score: 235 bits (599), Expect = 1.220e-76
Identity = 108/162 (66.67%), Postives = 127/162 (78.40%), Query Frame = 1
Query:   16 IDDAICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFS 501
            + DA CK P  STKDFI QQTM+R+KDPKKSL+FYT +LGMRLL+ +     +F++YF+GY Q  +IP D+ E+T +CF Q   LELTHNWGTE D D KYH+GN DPRGFGHIGI+VPDVY ACERFEK GV F KTPDGG MKGLAFI DPDGY +E+ S
Sbjct:    8 VQDA-CKEPDTSTKDFIFQQTMIRVKDPKKSLEFYTGVLGMRLLKRIDMPSMKFTVYFIGYDQPENIPTDENEKTIYCFMQKATLELTHNWGTETD-DSKYHNGNSDPRGFGHIGISVPDVYEACERFEKLGVPFIKTPDGGKMKGLAFIQDPDGYWVEILS 167          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: UPI0014255C2B (lactoylglutathione lyase-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255C2B)

HSP 1 Score: 234 bits (598), Expect = 1.850e-76
Identity = 104/159 (65.41%), Postives = 128/159 (80.50%), Query Frame = 1
Query:   31 CKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLK-YHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFSA 504
            C TP  STK+FIMQQTM RIKDPK SLDFYTR+LGMRLL    F   +FS+YF+GYC+  DIP D+ ER +WCFQQ+G +ELTHN+GTE+DP+ K YH+GN +P+GFGHIG++VPDV  AC+RFE+ GV+F K P+ G MKGLAFI DPDGY IE+ +A
Sbjct:   13 CSTPDESTKEFIMQQTMYRIKDPKVSLDFYTRVLGMRLLHTFDFPSMKFSLYFMGYCKPEDIPADRAERAKWCFQQSGTIELTHNYGTESDPEFKGYHNGNSEPKGFGHIGLSVPDVEVACKRFEELGVKFIKKPNAGTMKGLAFIQDPDGYWIEILTA 171          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: H2ZYK6_LATCH (Lactoylglutathione lyase n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZYK6_LATCH)

HSP 1 Score: 234 bits (598), Expect = 2.500e-76
Identity = 104/158 (65.82%), Postives = 123/158 (77.85%), Query Frame = 1
Query:   28 ICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFS 501
            +C  P PSTKDF+MQQTMLR+KDPKKSL+FYT++LGM  LQ+  F   +FS+YF+GY  + +IP D KERT W F +  A+ELTHNWGTEN+    YH+GN DPRGFGHIGI VPDVY AC+RFE+ GVQF K PD G MKGLAFI DPDGY IE+ S
Sbjct:   20 VCCDPDPSTKDFMMQQTMLRVKDPKKSLEFYTKVLGMTFLQKFDFPSMKFSLYFLGYEDKTEIPADMKERTAWTFSRMAAIELTHNWGTENEAGQAYHNGNSDPRGFGHIGIAVPDVYAACKRFEELGVQFVKKPDDGKMKGLAFIQDPDGYWIEILS 177          
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Match: UPI001CF93549 (lactoylglutathione lyase n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF93549)

HSP 1 Score: 234 bits (596), Expect = 4.860e-76
Identity = 107/157 (68.15%), Postives = 121/157 (77.07%), Query Frame = 1
Query:   31 CKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTENDPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMKGLAFIFDPDGYSIELFS 501
            C  P PSTKDF+MQQTMLRIKDPKKSLDFYTRILGM LLQ+  F   +FS+YF+ Y  + +IP D KER  W F +   +ELTHNWGTEND +  YHSGN DPRGFGHIGI VPDVY AC+RFE+ GV+F K PD G MKGLAFI DPDGY IE+ S
Sbjct:   20 CTDPDPSTKDFMMQQTMLRIKDPKKSLDFYTRILGMTLLQKFDFPAMKFSLYFLAYEDKKEIPADCKERAAWTFSRKATIELTHNWGTENDENQSYHSGNSDPRGFGHIGIAVPDVYAACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILS 176          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.68.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK52_ECTSI1.490e-10986.67Lactoylglutathione lyase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KMV4_9PHAE5.740e-10188.16Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CC... [more]
A0A8K0KI60_LADFU3.720e-7967.50Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A1B6BWJ1_9HEMI4.330e-7865.84Lactoylglutathione lyase n=1 Tax=Clastoptera arizo... [more]
A0A6A4WGT3_AMPAM4.400e-7766.88Lactoylglutathione lyase n=2 Tax=Amphibalanus amph... [more]
A0A1I8NAP6_MUSDO6.680e-7764.81Lactoylglutathione lyase n=6 Tax=Calyptratae TaxID... [more]
UPI001B88A26C1.220e-7666.67lactoylglutathione lyase-like n=1 Tax=Gigantopelta... [more]
UPI0014255C2B1.850e-7665.41lactoylglutathione lyase-like n=1 Tax=Anneissia ja... [more]
H2ZYK6_LATCH2.500e-7665.82Lactoylglutathione lyase n=1 Tax=Latimeria chalumn... [more]
UPI001CF935494.860e-7668.15lactoylglutathione lyase n=1 Tax=Protopterus annec... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:634923..636742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LK52
Preferred nameGLO1
PFAMsGlyoxalase
Model size507
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K16803,ko:K21768
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006089,GO:0006090,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009414,GO:0009415,GO:0009438,GO:0009628,GO:0009636,GO:0009651,GO:0009889,GO:0009987,GO:0010035,GO:0010468,GO:0010556,GO:0010941,GO:0016020,GO:0016829,GO:0016846,GO:0019219,GO:0019222,GO:0019243,GO:0019752,GO:0019904,GO:0030097,GO:0030099,GO:0030154,GO:0030316,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034641,GO:0042180,GO:0042182,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051596,GO:0051716,GO:0060255,GO:0060548,GO:0061727,GO:0065007,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0080090,GO:0097237,GO:0098754,GO:0104004,GO:1901564,GO:1901575,GO:1901615,GO:1901700,GO:1903506,GO:1990748,GO:2000112,GO:2001141
Exons5
Evalue2.45e-110
EggNOG OGsCOG0346@1|root,KOG2944@2759|Eukaryota
EC4.4.1.5
Descriptionlactoylglutathione lyase activity
Cds size507
COG categoryE
BRITEko00000,ko00001,ko01000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870512.1996276-CDS-A-nodosum_M_contig98:634922..6350081680870512.1996276-CDS-A-nodosum_M_contig98:634922..635008Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 634923..635008 +
1680870512.2165709-CDS-A-nodosum_M_contig98:635312..6353661680870512.2165709-CDS-A-nodosum_M_contig98:635312..635366Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 635313..635366 +
1680870512.2271864-CDS-A-nodosum_M_contig98:635679..6357971680870512.2271864-CDS-A-nodosum_M_contig98:635679..635797Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 635680..635797 +
1680870512.300832-CDS-A-nodosum_M_contig98:636001..6361991680870512.300832-CDS-A-nodosum_M_contig98:636001..636199Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 636002..636199 +
1680870512.3133476-CDS-A-nodosum_M_contig98:636691..6367421680870512.3133476-CDS-A-nodosum_M_contig98:636691..636742Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig98 636692..636742 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.68.1prot_A-nodosum_M_contig98.68.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig98 634923..636742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig98.68.1

>prot_A-nodosum_M_contig98.68.1 ID=prot_A-nodosum_M_contig98.68.1|Name=mRNA_A-nodosum_M_contig98.68.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=169bp
MHGQGIDDAICKTPSPSTKDFIMQQTMLRIKDPKKSLDFYTRILGMRLLQ
ELHFSEWEFSIYFVGYCQEADIPGDQKERTRWCFQQAGALELTHNWGTEN
DPDLKYHSGNEDPRGFGHIGITVPDVYTACERFEKEGVQFRKTPDGGNMK
GLAFIFDPDGYSIELFSAD
back to top

mRNA from alignment at A-nodosum_M_contig98:634923..636742+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig98.68.1 ID=mRNA_A-nodosum_M_contig98.68.1|Name=mRNA_A-nodosum_M_contig98.68.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1820bp|location=Sequence derived from alignment at A-nodosum_M_contig98:634923..636742+ (Ascophyllum nodosum dioecious)
ATGCACGGCCAGGGTATTGACGATGCCATCTGCAAAACACCAAGCCCTTC GACAAAGGACTTCATCATGCAACAAACAATGCTCAGGTGTGCAAAATTAT CTTCTCTTGCAGGATGGTGATAAATGTGTTCGGGGGTGATGGATGATGGA TTCCACGAAATGAAAAGAGGTTGTGGAGCACTTGCTATTAATAGCAACCA CACAGCGAAGGAGTTCGGAGCTCGAGGACCTCATGTGGGATGGTACGAAC GCGAATGTTAATCCTTACTTTGTACTTAATACTCCGGTTCAGGCAGTAAA AGCTATGTGTCCGCAGTGTAGTCGCGGGCCACACTGGATGCCAACGCCTT CCAACGCCTTGAGTCAAACCTCGATTATCCGTGCCTTCAGGATCAAGGAC CCCAAAAAGAGCTTGGATTTCTACACTCGCATCCTAGGCATGAGGTGGGT GCGTTTGGATTCTTAAAACGAAGTTCTCCGTAGAAACATTCAAAATAAAT CGACTCAGTCTTGCAGGTGACCCTCTGCGCGGTTCCTCCGTGAAGTCTAC GAAGCATGTAGAATGGCGTTAAAAATCTACGGAGTTTCCGGGACAAACTG AGATGTGGAATAAGAAGTTGACATGTGGCAAAAATGGGTCCAGGCGATGT GAAAACGCAAGCAGGGTTGATCGCCTGCCCGCTCGTGACCGTGCCATCAG ACTATTATAACACTTCGTGTGCACCTCTCCTGCCTTCTCTCCCGCTATGG CGTTCAGACTGCTACAAGAGCTCCACTTCTCCGAGTGGGAATTTAGCATC TACTTCGTCGGCTATTGCCAAGAGGCCGACATCCCTGGTGATCAGAAGGA AAGAACTCGCTGGTGCTTCCAACAGGTGCGTGCTGCTTATGCCGATCGGT CTCTGTTCCTTAAAGACCCGCAACGGGTTATCGGTGTTCGAAGGAATTTT CTGGCAGGGAAGAATTCAAGCATAAATGCCGCGCTCATTACAATGCGAGA AACATAACATTTCGCTTCGCATTTTTGTGTGGCTGGAATGTGCTTGACTG CTTTGCTTTTTTGCGGTGATGCGCTGCAGGCCGGTGCGTTGGAACTCACT CACAATTGGGGAACTGAAAACGACCCCGATCTGAAGTACCACAGCGGAAA TGAAGATCCGCGAGGATTCGGCCACATTGGAATTACCGTTCCTGACGTGT ACACGGCGTGCGAGAGGTTCGAGAAAGAGGGAGTCCAGTTCCGAAAGACC CCCGATGGGGGTAACATGAAGGGCCTGGTACGATTACACGTGTAACCAAC GGACTTATTCATACTATATATATATATGATAGTAGTTTTAAACTTGTAAA TTATCAGCAAAATGTATTTGGCACTAGTGTACAAGTTTTAAGAGCCACGG CGCATATGTACACATCGGCACGATTTCCTCCGGAAAATGTCTTTCTATCT TACACATTTAGTAACATGGTGCTGATTAAAGAAAAATGTATTAATAACTG TATATATTTGTCATAAATGTAGGCAATGCCCCGAAGCTCAGTTTGTGGAA ATCGTCAAAGTTCACGAGATGTTGTACCGTCGGATTGAGAACACTGGAGA ACAATGTTTTTTGTGTCTTTTGGCCTTGCATCCGCGTATTTCGTGTCTTG AATAAATTCTGGTCTTTACGGAGCTCTACTGTACCCACCGGTAATCGTAT GTTAACAAGTACTATATATCGTGTGTATCGTCACTATTTACCCACCGCGC GATACTCCGGCGCGAGCAGGCATTTATTTTCGACCCCGATGGCTATTCTA TTGAGCTCTTCTCCGCGGAT
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig98:634923..636742+

>mRNA_A-nodosum_M_contig98.68.1 ID=mRNA_A-nodosum_M_contig98.68.1|Name=mRNA_A-nodosum_M_contig98.68.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=507bp|location=Sequence derived from alignment at A-nodosum_M_contig98:634923..636742+ (Ascophyllum nodosum dioecious)
ATGCACGGCCAGGGTATTGACGATGCCATCTGCAAAACACCAAGCCCTTC
GACAAAGGACTTCATCATGCAACAAACAATGCTCAGGATCAAGGACCCCA
AAAAGAGCTTGGATTTCTACACTCGCATCCTAGGCATGAGACTGCTACAA
GAGCTCCACTTCTCCGAGTGGGAATTTAGCATCTACTTCGTCGGCTATTG
CCAAGAGGCCGACATCCCTGGTGATCAGAAGGAAAGAACTCGCTGGTGCT
TCCAACAGGCCGGTGCGTTGGAACTCACTCACAATTGGGGAACTGAAAAC
GACCCCGATCTGAAGTACCACAGCGGAAATGAAGATCCGCGAGGATTCGG
CCACATTGGAATTACCGTTCCTGACGTGTACACGGCGTGCGAGAGGTTCG
AGAAAGAGGGAGTCCAGTTCCGAAAGACCCCCGATGGGGGTAACATGAAG
GGCCTGGCATTTATTTTCGACCCCGATGGCTATTCTATTGAGCTCTTCTC
CGCGGAT
back to top