mRNA_A-nodosum_M_contig977.3.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 259 bits (661), Expect = 3.030e-72 Identity = 134/249 (53.82%), Postives = 169/249 (67.87%), Query Frame = 2
Query: 707 RNRRPRRL----TEYNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEAAEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNC 1441
R+RR RRL +YN+ +N AD T G AA +A+P TVRI+ + YV D+D +EL A+ D+AG+F RN+V V+RGAV S +L VD ++S VS SPLFKLPVD +QRGRDHG+P+YN AREA+GL AT+F DV+ D ++ + L +AYGGDI LDA TGALAEG++ S+ +LGDLL W DQL RSI GDR +H H +V N TL D+I N TDLPLSVF P ITVC C
Sbjct: 202 RSRRGRRLYVSSNDYNTTINAAADAFTVTAGGAAFESALPGTVRIVSDGYVSTDDDNVELNVASADMAGIFARNNVADVLRGAVLSPALTVDAYYSPVVSNLSPLFKLPVDGVQRGRDHGLPSYNGAREAFGLDPATTFEDVSDDADLASRLSDAYGGDINGLDAFTGALAEGTHSSTGGVLGDLLVAAWSDQLTRSIAGDRFYHLHARYMENVANTTLMDVIGRVTNATDLPLSVFQAPSITVCDGGC 450
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 254 bits (650), Expect = 1.370e-70 Identity = 133/247 (53.85%), Postives = 167/247 (67.61%), Query Frame = 2
Query: 737 YNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEAAEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
YN ++P ADV T AA +A+P T+RI+ E YV D D +ELT AAEDI GLFE +++G ++RGAV S ++AV H++SAVS SPLFKLPVD +QRGRDHGVP+YND R AYGL AT FSDV++D +V LL+ AYGG+I LDA TGALAE S I G LL W DQLYRS+ GDR H H P +V +++ L+ TL +T LP S FT PE+TVC C T +S VSL++
Sbjct: 249 YNDTVDPSADVFVTVAMTAAFESALPSTLRIVSEGYVATDYDHLELTVAAEDITGLFEHSAIGDILRGAVLSPAMAVGAHYASAVSNASPLFKLPVDMVQRGRDHGVPSYNDVRGAYGLPEATDFSDVSSDGDVVQLLDAAYGGEIDNLDACTGALAEDKEASLGGIFGYLLHTAWVDQLYRSLFGDRYHHLHSRPIENVSLVSISQLLNRTLGLTALPESGFTVPEVTVCTGQCEATGTSGVSLAE 495
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 250 bits (639), Expect = 3.970e-69 Identity = 135/247 (54.66%), Postives = 164/247 (66.40%), Query Frame = 2
Query: 737 YNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEAAEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
Y+ LNP ADV T AA +A+P T+RI+ E YV D D +ELT AAEDI GLFE +++G ++RGAV S ++AV HF+SAVS SPLFKLPVD +QR RDHGVP+YND REAY LS+AT+FSDV+AD +V LL AYGG+I LDA GALAE S GDLL W +QLYR+ GDR H H P +V ++ LI TL VTDLP S FT PE+TVC C S VSL++
Sbjct: 249 YDDLLNPSADVFVTVAMTAAFESALPSTLRIVSEGYVATDYDHLELTVAAEDITGLFEHSAIGDILRGAVLSPAMAVWPHFASAVSNASPLFKLPVDMVQRARDHGVPSYNDVREAYELSKATAFSDVSADDDVVQLLYAAYGGEIENLDACVGALAEEKEASLGGNFGDLLHTAWVNQLYRTFFGDRYHHLHSRPIENVSLASISGLINQTLGVTDLPASGFTVPEVTVCTGECEAAGISGVSLAE 495
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 239 bits (609), Expect = 2.590e-65 Identity = 128/247 (51.82%), Postives = 160/247 (64.78%), Query Frame = 2
Query: 737 YNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEAAEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
Y+ ++P ADV T AA +A+P T+RI+ E YV D D +ELT AA+DI GLFE +++G ++RGAV S ++AV H++SAVS SPLFKLPVD +QR RDHGVP+YND REAY L +AT+ SDV+AD +V LL AYGG+I LDA GALAE S GDLL W QLYR+ GDR H H P +V ++ LI TL VTDLP S F PE+TVC C S VSL++
Sbjct: 234 YDDTVDPSADVFVTVAMTAAFESALPSTLRIVGEGYVATDYDHLELTVAADDITGLFEHSTIGDILRGAVLSPAMAVGAHYASAVSNASPLFKLPVDMVQRARDHGVPSYNDVREAYDLPKATAMSDVSADDDVVELLYAAYGGEIENLDACVGALAEEKEASLGGNFGDLLHTAWVYQLYRTFFGDRYHHLHSRPIENVSLASISGLINQTLGVTDLPESGFMVPEVTVCTGECEAAGISGVSLAE 480
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: A0A6H5JBZ5_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ5_9PHAE) HSP 1 Score: 210 bits (534), Expect = 1.450e-59 Identity = 109/195 (55.90%), Postives = 132/195 (67.69%), Query Frame = 2
Query: 893 IAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
+AG+F RN V V+RGAV S +L VD ++S VS SPLFKLPVD +QRGRDHG+P+YN AREAYGL AT+F DV+ D ++ + L +AYGGDI LDA TGALAEG++ S+ +LGDLL W DQL RSI GDR +H H +V N TL D+I N TDLPLSVF P ITVC C+ LSD
Sbjct: 1 MAGIFARNDVADVLRGAVLSPALTVDAYYSPVVSNLSPLFKLPVDGVQRGRDHGLPSYNAAREAYGLDPATTFEDVSDDADLASRLSDAYGGDIDGLDAFTGALAEGTDSSTGGVLGDLLVAAWSDQLTRSIAGDRFYHLHVRNMENVANTTLMDVIGRVTNATDLPLSVFQAPSITVCDGGCAGDGDGVAVLSD 195
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 221 bits (564), Expect = 3.560e-59 Identity = 123/271 (45.39%), Postives = 158/271 (58.30%), Query Frame = 2
Query: 731 TEYNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEA--AEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVT--------------------ADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
T+Y+ ++NPGAD T G AA +A+P TVR++ E Y D IEL A A+ + F V V+RGAV S A DTH+++AVS SPLFKLPVD++QRGRDHG+PTYNDAR A+GLS AT+F+DVT AD V +L AYGG++ LDA+TGALAE + SS G+LL W +Q+YR+ GDR H H D T+ DLI T TD+PLS F + VC ++CS+ S LSD
Sbjct: 432 TDYDENINPGADTFTLTAGAAAFESALPSTVRVVGEGYESTRYDNIELAAAVGADSLVSFFNNVKVVDVLRGAVLSPVYAADTHYTAAVSNGSPLFKLPVDSVQRGRDHGLPTYNDARAAFGLSEATTFTDVTTSXXXXXXXXXXXXXXXGSDADEEVADILSTAYGGNVSTLDAVTGALAEPTMASSGGFFGELLHAAWLEQMYRAFQGDRFHHLHSRDIEDASLTTISDLINRTTGATDIPLSAFVAATVEVCGADCSSIGVSEADLSD 702
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 204 bits (519), Expect = 2.730e-54 Identity = 115/248 (46.37%), Postives = 160/248 (64.52%), Query Frame = 2
Query: 737 YNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEAAEDIAGLFER-NSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
Y++ + G DV TV ALY+A+P TV ++D+ + E +EL A D+AGL R + +IRGA ++ + +D F + VS +SPLF PV+AIQRGRDHGVP+YN AREAY LSR SF+++T+DT V+A L AYG D+ LLDA TGALAE + S G LL+ V+ +QLYR+IVGDR H H D TL++LI + V+ +PL F+ P++ V SNCS+TE + V+L++
Sbjct: 318 YDAGTDAGTDVFFATVAAPALYSALPSTVGLLDDGFEVMAEHEVELATANADLAGLVTRIGGIEPIIRGASYARARGIDASFVAEVSVSSPLFNFPVEAIQRGRDHGVPSYNSAREAYALSRFDSFAEITSDTTVQATLSTAYGNDVDLLDAYTGALAE-TEEGSGLFAGPLLRMVFLEQLYRAIVGDRHHHSHSTQNEDAALSTLKNLILNNSLVSSIPLDSFSAPDL-VTSSNCSSTEMNEVTLAE 563
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.400e-46 Identity = 99/210 (47.14%), Postives = 128/210 (60.95%), Query Frame = 2
Query: 731 TEYNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEA--AEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVT----------------------ADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSI 1288
T+Y+ + NPGAD T GVAA +A+P TVR++ E Y D IEL A A+ + F V V+RGAV S A DTH+++AVS SPLFKLPVD++QRGRDHG+PTYNDAR A+GLS AT+F+DVT AD V +L AYGG++ LDA+TGALAE + SS + G+LL W +Q+YR +
Sbjct: 401 TDYDENTNPGADTFTLTAGVAAFESALPSTVRVVGEGYESTRYDNIELAAAVGADGLVSFFNNVKVVDVLRGAVLSPVYAADTHYTAAVSNGSPLFKLPVDSVQRGRDHGLPTYNDARAAFGLSEATTFTDVTTXXXXXXXXXXXXXXXXXXGSDADEEVADILSTAYGGNVSTLDAVTGALAEPTMASSGGVFGELLHAAWLEQMYRCV 610
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 182 bits (463), Expect = 6.160e-46 Identity = 106/232 (45.69%), Postives = 132/232 (56.90%), Query Frame = 2
Query: 836 EDYVPADEDGIELTEA--AEDIAGLFERNSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQRGRDHGVPTYNDAREAYGLSRATSFSDVT----------------ADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
E Y D EL A A+ + F+ V V+RGAV S LA +++F++AVS SPLFKLPVDA+QRGRDH +PTYNDAR+A+GL AT+FSDVT +D V +L AYGGDI LDA+TGALAE SS G+LL W DQ+YR+ GDR H H DV T+ DL+ T DLPLS F + VC ++C+ V LSD
Sbjct: 356 EGYESTRYDNTELAAAVGADSLVSFFDSVEVADVLRGAVLSPVLAANSYFTTAVSNGSPLFKLPVDAVQRGRDHALPTYNDARQAFGLDVATTFSDVTTSXXXXXXXXXXXXXDSDELVATILSAAYGGDISTLDAVTGALAEPMLTSSGGFFGELLHAAWMDQMYRTFRGDRFHHLHSRSIEDVSLTTISDLLNRTTGAADLPLSAFAAAGVEVCGADCTAVGEEDVELSD 587
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Match: A0A6H5K9L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L2_9PHAE) HSP 1 Score: 167 bits (424), Expect = 7.280e-42 Identity = 114/299 (38.13%), Postives = 159/299 (53.18%), Query Frame = 2
Query: 716 RPRRLTE----YNSDLNPGADVLATTVGVAALYAAIPPTVRIMDEDYVPADEDGIELTEAAEDIAGLFER-NSVGSVIRGAVFSSSLAVDTHFSSAVSTTSPLFKLPVDAIQR-------------GRD---------------------------HGVPTYNDAREAYGLSRATSFSDVTADTNVEALLEEAYGGDIGLLDALTGALAEGSNMSSSSILGDLLQEVWKDQLYRSIVGDRLFHQHYVPTTDVENLTLRDLIEHTLNVTDLPLSVFTTPEITVCYSNCSTTESSTVSLSD 1477
R R LT+ Y++ N G DV TV ALY+A+P TV ++D+ + E +EL A D+AGL R + +IRGA + + +D F + VS +SPLF PV+A G D GVP+YNDAREAY LSR +F+++T+DT V+A L AYG D+ LLDA TGALAE + S G LL+ V+ +QLYR+IVGDR H H D TL +LI + V+ +PL F+ P++ V S+CS+TE + V+L++
Sbjct: 308 RSRYLTQSNGSYDAGTNAGTDVFFATVAAPALYSALPSTVGLLDDSFEVMAEHEVELATANADLAGLVTRIGGIEPIIRGAYHARARGMDASFVAEVSVSSPLFNFPVEAAXXXXXFDSDIWFSLLGSDAAPPRPRPPLYPSSTSNSPFCLSYSPRQGVPSYNDAREAYRLSRIDTFTEITSDTTVQATLSAAYGNDVDLLDAYTGALAE-TEEGSGLFAGPLLRMVFLEQLYRAIVGDRHHHSHSTQNEDAALSTLTNLILNNSLVSSIPLDSFSAPDL-VTSSDCSSTEMNEVTLAE 604 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig977.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig977.3.2 >prot_A-nodosum_M_contig977.3.2 ID=prot_A-nodosum_M_contig977.3.2|Name=mRNA_A-nodosum_M_contig977.3.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=326bp MSDSTEASTTTSIDDISPIYTDDTTSYSPISTSFDSTTTDTRARGLSSTTback to top mRNA from alignment at A-nodosum_M_contig977:63262..67671+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig977.3.2 ID=mRNA_A-nodosum_M_contig977.3.2|Name=mRNA_A-nodosum_M_contig977.3.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4410bp|location=Sequence derived from alignment at A-nodosum_M_contig977:63262..67671+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig977:63262..67671+ >mRNA_A-nodosum_M_contig977.3.2 ID=mRNA_A-nodosum_M_contig977.3.2|Name=mRNA_A-nodosum_M_contig977.3.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at A-nodosum_M_contig977:63262..67671+ (Ascophyllum nodosum dioecious)back to top |