mRNA_A-nodosum_M_contig9754.3.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig9754.3.1
Unique NamemRNA_A-nodosum_M_contig9754.3.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A6H5KI73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI73_9PHAE)

HSP 1 Score: 454 bits (1168), Expect = 1.890e-157
Identity = 224/272 (82.35%), Postives = 250/272 (91.91%), Query Frame = 1
Query:   28 SVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            SVKLFRP ENAKRIRASA RILMEPPP DLFI+ACKM VKANME+VPPYG++GALYLRPLLFG+GARIGLQPSDEYTLLV+A PV N YYKGG KPT+AVVIEDYDRAAPKGVG VKVAGNYAADM+PN+LAK++GYPI LYLDAKT+T VEEFSTSNFFAVT DN+FVTPDSPAVLPSITNKSLM+LA+D GMVVE RP+PF EV+SFKEVAACGTAVVMT+IK+IVKG E+I+IN G DE GPVC+ L++RVRG+Q GELEDKF WM+PV
Sbjct:  160 SVKLFRPDENAKRIRASAERILMEPPPADLFIKACKMAVKANMEYVPPYGSEGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGN-YYKGGFKPTTAVVIEDYDRAAPKGVGAVKVAGNYAADMMPNMLAKQAGYPIGLYLDAKTNTLVEEFSTSNFFAVTEDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVEHRPVPFDEVSSFKEVAACGTAVVMTTIKQIVKGGEIISINGGSDETGPVCQALYDRVRGVQAGELEDKFGWMMPV 430          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A6V1P2K0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2K0_HETAK)

HSP 1 Score: 349 bits (896), Expect = 8.020e-117
Identity = 174/275 (63.27%), Postives = 213/275 (77.45%), Query Frame = 1
Query:   19 PSYSVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            P  SVK+FR  ENAKRI  SA RILM   PE+ F++ CK  V+ N++FVPPYG  G+LYLRPLLFGSG R+GLQP+DEYTLLV+  PV++ YY GG +P +AVVI+DYDRAAP+GVG  KVAGNYAADMLPNI+AKK+G+PI LYLDAKT+ FVEEFSTSNF  VT D R+ TPDSP +L SITNKSLM +A+D G+VV+  PIP  +VA F EVAACGTAVV+T I ++V  ++V+ IN    ++GPV + L+ R+R IQ GE EDKF W   V
Sbjct:  112 PDGSVKIFRADENAKRINRSAARILMPEFPEERFVELCKEVVRDNLDFVPPYGTGGSLYLRPLLFGSGPRVGLQPADEYTLLVMVMPVAD-YYPGGPQPITAVVIDDYDRAAPRGVGECKVAGNYAADMLPNIMAKKAGFPIGLYLDAKTNRFVEEFSTSNFLGVTADGRYRTPDSPTILKSITNKSLMRIAEDEGLVVDRTPIPIEDVAGFAEVAACGTAVVLTPINKVVYQDKVMEINGASKDIGPVTQKLYNRMRAIQYGEEEDKFGWTFQV 385          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: K8Z6W3_NANGC (Branched-chain amino acid aminotransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W3_NANGC)

HSP 1 Score: 343 bits (881), Expect = 4.020e-115
Identity = 171/272 (62.87%), Postives = 209/272 (76.84%), Query Frame = 1
Query:   28 SVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            S+++FRPQENAKR+R SA R+LM   PED F++A +  V  N ++VPP+G  G+LY+RPLLFGSG RIGL PSDEYTLL++  PV + YYKGG+ P SA+VI+DYDRAAP+GVG+VKVAGNYAAD+LPN+L KK GYPI LYLDAKT++FVEEFSTSNF A+     FVTP SP VLPSITNKSLM+LA+D G+ V+ R IP +EV + +EVAACGTAVV+T +  +V  +EVI I       GPV   L+ RVR IQ GE EDKF W V V
Sbjct:   75 SIRIFRPQENAKRLRMSAERLLMTAFPEDNFVEAVRRVVADNADYVPPFGTGGSLYIRPLLFGSGPRIGLNPSDEYTLLIMPIPVGD-YYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNLLGKKKGYPIGLYLDAKTNSFVEEFSTSNFVAIDSSGAFVTPRSPTVLPSITNKSLMDLARDEGLAVQERAIPITEVKTLREVAACGTAVVVTPVNRVVYRDEVIKIGGEDGGTGPVTAKLYSRVRAIQQGEAEDKFSWTVKV 345          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A0G4F3S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3S3_VITBC)

HSP 1 Score: 324 bits (830), Expect = 1.560e-106
Identity = 161/274 (58.76%), Postives = 208/274 (75.91%), Query Frame = 1
Query:   31 VKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHD-NRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITIN--DGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            V++FRP +NA+R++ SA R++M P PE++FI AC+  V AN+ +VPPYG  G+LYLRP+L GS  RIG+QP++EYT  V+  PV + YYKGG++P SA V+E YDRAAP+GVG  KVAGNYAAD+LPN + K  G+PIALYLDAK + +++EFSTSNF AVT D N +VTP+SP++LPSITN SLMELAKD G+  + RP+P  EV SF EVAACGTAV++T I  IV  ++   +   DG   +GPV + L+ RVRGIQ GE  DKF WMVP+
Sbjct:  132 VRMFRPLDNARRLQRSAERLMMPPVPENIFIYACRQAVLANLAYVPPYGTGGSLYLRPVLIGSSPRIGVQPAEEYTFFVMVIPVGD-YYKGGLQPVSAWVVEGYDRAAPQGVGAYKVAGNYAADLLPNSIGKSKGFPIALYLDAKENRYIDEFSTSNFIAVTQDGNTYVTPESPSILPSITNLSLMELAKDEGLDTQRRPVPIEEVGSFSEVAACGTAVIITPIDRIVHKDKTYVVRGPDGRP-VGPVFERLYRRVRGIQYGEEADKFGWMVPL 403          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A7X7KWI3_9BACT (Branched-chain-amino-acid transaminase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7KWI3_9BACT)

HSP 1 Score: 319 bits (818), Expect = 1.180e-105
Identity = 150/271 (55.35%), Postives = 201/271 (74.17%), Query Frame = 1
Query:   31 VKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            V+ FRP ENA+R+  +A R+ M P P +LF++A +  V+AN  F+PPYG  G+LY+RPLL GSG +IG+ P+DEYT ++L  PV   YYKGG+KP  A +++DYDRAAP GVG+VKVAGNYAA +  +  AK  GYP+ LYLDA+T T+VEEF+TSNFFA+T D ++VTPDSP++LPS+TN +L ++A D GM VE RP+ F E+ +F E+ ACGTAVV+T + EIV+G+ VI + DG D  GPV + L+  V+GIQ G+L D   W V V
Sbjct:   69 VRAFRPAENAERMYRTARRVCMAPVPVELFLEALRRVVQANRAFIPPYGTGGSLYVRPLLIGSGPQIGVAPADEYTFIILVMPVG-PYYKGGLKPVRAAILDDYDRAAPLGVGHVKVAGNYAASLFAHEQAKHDGYPVELYLDARTHTYVEEFATSNFFAITRDGKYVTPDSPSILPSVTNDTLKQVAADLGMPVETRPVAFGELGTFAEIGACGTAVVVTPVNEIVRGDTVIRVGDGSDTCGPVLQKLYNTVQGIQYGDLPDTHGWCVDV 338          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A7C6YN04_9BACT (Branched-chain-amino-acid transaminase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C6YN04_9BACT)

HSP 1 Score: 312 bits (800), Expect = 6.100e-103
Identity = 150/271 (55.35%), Postives = 201/271 (74.17%), Query Frame = 1
Query:   31 VKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            V LFRP+ENA+R+  +A R  M   PED+F+ ACK  +KANMEF+PPYG  G++Y+RPLLFGSGA IG+ P+ EYT +VL TPV  +YYKGG++   A+V++DYDRAAP+G G+VK+AGNYAA + P++ AK +GYP+ LYLDAK   ++EEF+TSNF A+T D ++VT +SP++LPSITN +L +LA+D G+ VE RPIPF EV SF EVAACGTAVV+T + EI +  +V          GP+ + L++ V+GIQ GE+ D   W V V
Sbjct:   69 VSLFRPEENARRLAVTARRTCMAVVPEDMFVDACKRVLKANMEFIPPYGTGGSMYVRPLLFGSGAEIGVAPAKEYTFIVLVTPVG-AYYKGGLQGVRAIVVDDYDRAAPQGTGHVKIAGNYAASLYPHLEAKAAGYPVELYLDAKEHKWIEEFATSNFLAITKDGKYVTVESPSILPSITNMTLQQLARDMGIPVEVRPIPFEEVTSFAEVAACGTAVVITPVNEIERAGKVYQTGPATG-CGPILEKLYKAVQGIQYGEIPDTHGWNVDV 337          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A7S1YVX8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YVX8_TRICV)

HSP 1 Score: 311 bits (796), Expect = 1.050e-102
Identity = 160/278 (57.55%), Postives = 202/278 (72.66%), Query Frame = 1
Query:   28 SVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGM-KPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHD-NRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVK----GEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            +V +FRP ENAKR+++S  RI+M P P DLF++ C   VK N+ +VPPYG+ GALYLRPLLFGSG RIGLQP+DEYT L++  PV + YYKGG+  P  A++I+DYDRAAP+GVGNVKVAGNYAAD+LPN+  KK G+PI+LYLDA T + VEEFSTSNF  + +D  +++TP SP+VLPSITNKSLM +AKD G  VE R IP  E+  F EV ACGTAVV+T +  + +    GE         D++G   + L+ RVR IQ GE EDK+ W V V
Sbjct:   35 NVYIFRPDENAKRLQSSCERIMMPPVPHDLFMKVCNDVVKDNIAYVPPYGSGGALYLRPLLFGSGPRIGLQPADEYTFLIMVIPVGD-YYKGGLASPVDALIIDDYDRAAPRGVGNVKVAGNYAADLLPNMQGKKKGFPISLYLDAATQSLVEEFSTSNFVGIDNDAKKYITPISPSVLPSITNKSLMTIAKDEGYEVETRDIPVEEMERFDEVVACGTAVVVTPVGSVTRFGKDGEPTKYEFGDSDKVGAKTQKLYNRVRAIQLGEEEDKWGWNVKV 311          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A7S2GLR1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLR1_9STRA)

HSP 1 Score: 311 bits (798), Expect = 9.490e-102
Identity = 159/270 (58.89%), Postives = 198/270 (73.33%), Query Frame = 1
Query:   28 SVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDWMV 837
            SV++FRP ENAKR+  SA R +M   P D F+ A +  V+ N+++VPP  ++GALY+RPLLFGSG RIGL PSDEYTL+ LA PV + Y  G + P    V+E YDRAAP GVG+VKVAGNYAAD+ PN   KK G+PI LYLDA+T+T VEEFSTSNFF +T D  +VTP+SPAVLPSITNK LM+LAKD G  V+ RPIP +E+ SFKEVAACGTAVV+T I+ I  GE+     D   + GPV ++L++R+R +QTGE  D   W V
Sbjct:  134 SVRVFRPDENAKRMARSADRTMMPSLPVDDFVAATQRLVRDNLDYVPPPSSKGALYIRPLLFGSGPRIGLSPSDEYTLIFLAMPVGDYYAGGKLTPVKGRVVEGYDRAAPNGVGDVKVAGNYAADLKPNQQMKKDGFPIGLYLDARTNTLVEEFSTSNFFGITEDGTYVTPESPAVLPSITNKCLMDLAKDEGREVQRRPIPVTELDSFKEVAACGTAVVITPIRSIQHGEKEYFFGD---KTGPVTQHLYQRLRAMQTGEEADTLGWSV 400          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A1X6NTS1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTS1_PORUM)

HSP 1 Score: 310 bits (794), Expect = 8.530e-101
Identity = 159/275 (57.82%), Postives = 200/275 (72.73%), Query Frame = 1
Query:   31 VKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGL----DEMGPVCKNLFERVRGIQTGELEDKFDWMVPV 843
            V LFRP ENAKR+ +SA R+L+   P DLF+ ACK  V+ N+EFVPPYG  G+LY+RPLLFGSG +IGL P+DE+T LVL TPV + YY GG  P +A+V  DYDRAAP+GVG+VK AGNYAAD+LPN LAK++GYPI LY+DA     VEEF TSNF  +   N +VTPDSP+VLPS+TNK+L  LA+DAGMVVE R +   EV  F+EVAACGTAVV+T++  +V   +VIT+  G     + +GP    L+++VRGIQ GE+ D   W   V
Sbjct:  153 VSLFRPDENAKRMASSAARLLIPEVPADLFLSACKAAVRENVEFVPPYGTGGSLYVRPLLFGSGPKIGLSPADEFTFLVLVTPVGD-YYAGGPAPVTAIVTTDYDRAAPRGVGHVKCAGNYAADLLPNTLAKRAGYPINLYVDAADQRSVEEFGTSNFVGLI-GNTYVTPDSPSVLPSVTNKTLATLAEDAGMVVERRTVDIGEVGEFEEVAACGTAVVITAVTRVVYKGDVITVGAGRGSDPEVVGPRFSELYKQVRGIQYGEIADPHGWCFDV 425          
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Match: A0A356J4P6_9BACT (Branched-chain-amino-acid transaminase n=3 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A356J4P6_9BACT)

HSP 1 Score: 306 bits (785), Expect = 1.300e-100
Identity = 149/270 (55.19%), Postives = 199/270 (73.70%), Query Frame = 1
Query:   22 SYSVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKANMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYKGGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIALYLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKDAGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLDEMGPVCKNLFERVRGIQTGELEDKFDW 831
            S  + +FRP ENAKR+  +A R +M P PE++FI+A +  V AN EFVPPYG  G++YLRPLL G+G +IG+ P+ EYT L++  PV  +YYKGGMKP  AV+++++DRAAP G+G+VKV GNYAA +  +  AK  G+P+ LYLDAKT T VEEFSTSNF  +  D  +VTPDS +VLPS+TN SL ++A D G  VECRP+P++E+  F EVAACGTAVV+T + EI +GE+VI I+D  D++GP  + L+E V+GIQ G+L D   W
Sbjct:   68 SGKIAIFRPDENAKRMHRTAVRTVMAPVPEEMFIEAAEKLVAANEEFVPPYGTGGSMYLRPLLIGTGPQIGVAPAKEYTFLMMCMPVG-AYYKGGMKPVRAVILDNWDRAAPHGMGDVKVGGNYAASLYAHEKAKHDGWPVELYLDAKTHTLVEEFSTSNFLGIKKDGTYVTPDSHSVLPSVTNMSLKQVASDLGWKVECRPVPYTEIKDFAEVAACGTAVVVTPVWEITRGEDVIRISDP-DKVGPHLQKLYETVQGIQYGDLPDTHGW 335          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9754.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI73_9PHAE1.890e-15782.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1P2K0_HETAK8.020e-11763.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K8Z6W3_NANGC4.020e-11562.87Branched-chain amino acid aminotransferase n=3 Tax... [more]
A0A0G4F3S3_VITBC1.560e-10658.76Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7X7KWI3_9BACT1.180e-10555.35Branched-chain-amino-acid transaminase n=1 Tax=Len... [more]
A0A7C6YN04_9BACT6.100e-10355.35Branched-chain-amino-acid transaminase n=1 Tax=Len... [more]
A0A7S1YVX8_TRICV1.050e-10257.55Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2GLR1_9STRA9.490e-10258.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1X6NTS1_PORUM8.530e-10157.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A356J4P6_9BACT1.300e-10055.19Branched-chain-amino-acid transaminase n=3 Tax=Ver... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9754contigA-nodosum_M_contig9754:7504..9994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT73
PFAMsAminotran_4
Model size846
Max annot lvl2759|Eukaryota
KEGG rclassRC00006,RC00036
KEGG koko:K00826
KEGG ReactionR01090,R01214,R02199,R10991
KEGG Pathwayko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00036,M00119,M00570
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.04e-159
EggNOG OGsCOG0115@1|root,KOG0975@2759|Eukaryota
EC2.6.1.42
Descriptionbranched-chain-amino-acid transaminase activity
Cds size846
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870503.893957-CDS-A-nodosum_M_contig9754:7503..76261680870503.893957-CDS-A-nodosum_M_contig9754:7503..7626Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9754 7504..7626 -
1680870503.9099128-CDS-A-nodosum_M_contig9754:7923..81631680870503.9099128-CDS-A-nodosum_M_contig9754:7923..8163Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9754 7924..8163 -
1680870503.9226265-CDS-A-nodosum_M_contig9754:8450..85551680870503.9226265-CDS-A-nodosum_M_contig9754:8450..8555Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9754 8451..8555 -
1680870503.9343321-CDS-A-nodosum_M_contig9754:8918..91491680870503.9343321-CDS-A-nodosum_M_contig9754:8918..9149Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9754 8919..9149 -
1680870503.9443464-CDS-A-nodosum_M_contig9754:9847..99941680870503.9443464-CDS-A-nodosum_M_contig9754:9847..9994Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9754 9848..9994 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9754.3.1prot_A-nodosum_M_contig9754.3.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig9754 7504..9994 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig9754.3.1

>prot_A-nodosum_M_contig9754.3.1 ID=prot_A-nodosum_M_contig9754.3.1|Name=mRNA_A-nodosum_M_contig9754.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=282bp
MSRRGLPSYSVKLFRPQENAKRIRASAFRILMEPPPEDLFIQACKMCVKA
NMEFVPPYGAQGALYLRPLLFGSGARIGLQPSDEYTLLVLATPVSNSYYK
GGMKPTSAVVIEDYDRAAPKGVGNVKVAGNYAADMLPNILAKKSGYPIAL
YLDAKTSTFVEEFSTSNFFAVTHDNRFVTPDSPAVLPSITNKSLMELAKD
AGMVVECRPIPFSEVASFKEVAACGTAVVMTSIKEIVKGEEVITINDGLD
EMGPVCKNLFERVRGIQTGELEDKFDWMVPV*
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mRNA from alignment at A-nodosum_M_contig9754:7504..9994-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig9754.3.1 ID=mRNA_A-nodosum_M_contig9754.3.1|Name=mRNA_A-nodosum_M_contig9754.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2491bp|location=Sequence derived from alignment at A-nodosum_M_contig9754:7504..9994- (Ascophyllum nodosum dioecious)
ATGTCTCGCCGCGGCCTCCCATCTTACAGCGTCAAGCTTTTCAGGCCCCA GGAGAACGCGAAGCGCATCCGGGCGAGTGCGTTCCGCATCCTCATGGAGC CGCCACCGGAGGATCTCTTCATACAGGCCTGCAAGATGTGTGTCAAGGTA CTCACTCGTACTGGTACTTTTGTCTGTGTATCCGACTCGAAGGCTGCTGC CGATGAACCGTAAGCGTGCAAAAAATCGCAGAACGTTTCTCGCTCAGCAA CGTTTCCGGCGCGCTACAGTAATCCCTGATTGTTATCCGTGATTGTTGTA CACACACCCCGTGAAGGGTAACCGAGGTCAGGTAGGTAAAGGTTGTGTTC GTGTTGTCAGTATTAATAGTATTCTTAGGCTTTTGCCTGGATGATGATGA TGGTGTCGCACGTTGTTAAACGACTTCGTACCTTATATTCTACCGTATGT AATACGTATTACTAATACAAGAAATCCTCCAGGCATTAGAAACTCCTGCG TTACAGTATCATCTTGAGGCGATGCTACGGTTGAAAGAAAAAAACAAAAA GAAAAAACAAGCCCACCCAACACCACGACAAGCGCCCGCGACTTTTAATA ACATAGGGTATTATTAGCTTCAGGAGATATACACCATAGGCGATATTCAC TTGTCTCGGGTAATGCAGCAGCGCGTATTTCGTTTGGAAGTATCTTGACC GAGCGTGCCCTCGTGGAACTGGTCGGGAAATATCTCAATATGTCTAATAT GCCAGCTAGCTCAAATAGTACTAAATATGTTGATCGATTGCTCGCCGCTT TACCGCCGCCTCGCCACCTCGGCCTATTTCCGAGGGCCCAAAAAGGCCAA CATGGAGTTCGTTCCACCGTACGGCGCCCAGGGTGCCTTGTACCTGCGGC CTCTACTTTTTGGATCGGGAGCCCGCATCGGCCTCCAGCCTTCAGACGAA TACACCCTGCTCGTTCTGGCCACCCCCGTGAGTAACTCCTACTACAAGGG AGGCATGAAACCCACGTCCGCGGTGGTGATTGAAGACTACGACCGAGCGG CGCCGAAAGGCGTGGGTAATGTGAAGGTGAGCGACGGATGTTCCGAGGCC GTTCCCCAAACAGAACGCCAAAGCTTGCTGGCTTTCTCTCCGTCTTTTGC TGTTGGTTTGTGCGTCGCTTGCGCGGCGTAAGCTTATGAATGAATGCCGA GCTGTTGGCGAGACAGGCGCGGGCGTTATATCGGCACGCCTGAAGCAACC TCCAAACATTTGTGGGGGCGTTGATATTGATAGCAACATAAAAAAAATAG GGTCTTCCCTTCATGCACGGGATGCGCGAGTCTATTAACGTCGCTTCCGC ACCATTCACTCCGCTTCCATTCTGCTTCCTCGCCGGCCACGCGCGATTTC TCCTGCATGGTTTATCCTTTATGGTTCTTCTTCTCCAAGGTTGCCGGGAA CTACGCGGCAGACATGTTGCCGAACATACTCGCGAAGAAGAGCGGTTATC CTATCGCACTCTATCTGGATGCCAAGACAAGCACCTTCGTGGAGGTGCGC GAGTTTTGCATCGTTGTGGCGACCCTGGAGCGTGTTCTTAGATTCCTGCT GCGTTCGTTTTGCTGCTTGGCTACGGGATTGATGCCTTGCCTCGGTTTGC CCCCTCCCCAGAAAAAACAGCCTATAATCTATAATCACGGACCTCCTCGG CGTGTGTGAAAACACGTTGCAGCGTAACTGTTTCGAGAAGAAGAAAAAAA CGCTCGCCCATGCGTCCCCCCTCCCCTCCTCCGCTTCATGTCTCTTATCG TGTTCTCGTGTGCTCTCGTCCCTTTCCTCAGGAATTTTCCACGTCCAACT TTTTCGCGGTGACGCACGACAACCGCTTCGTCACCCCCGACAGTCCCGCC GTGCTCCCGTCCATCACAAACAAGTCCCTCATGGAGCTCGCGAAGGATGC GGGGATGGTCGTCGAGTGCCGGCCCATTCCTTTCTCGGAAGTGGCTTCCT TCAAGGAGGTGGCGGCGTGCGGAACGGCCGTGGTGATGACATCGATCAAG GAGATCGTCAAGGGCGAGGAGGTGAGCCAGACCTGCGGGGGATGGTCAGA ATCGAGCTCGTCCACAAACGACACGAGTTCAGCCGATGACGCTTGGGGGA TCTGGACAATTAGCCTGCAGCTCTCGTCGCGCAGTCGCTCGCGTGCGTCT TGGACGGCCACCACCTTGGCACTTGGTCGTCGTCTATTTTTCCAGCACGT TGAATGTACGGTACACGGTACAAAGCAGTGCGAAACGAATGACGTTTGTC CCTAAATAGAATGACGGTGTGTGCTGATGACCCTTGCAAAAAAACGTCTG CCTTGTTGGCTTGTGCAGGTGATCACCATCAATGACGGTCTGGACGAGAT GGGGCCCGTTTGCAAAAATCTTTTCGAGAGGGTTAGGGGCATTCAGACGG GAGAACTCGAGGACAAGTTCGACTGGATGGTGCCCGTCTAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig9754:7504..9994-

>mRNA_A-nodosum_M_contig9754.3.1 ID=mRNA_A-nodosum_M_contig9754.3.1|Name=mRNA_A-nodosum_M_contig9754.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at A-nodosum_M_contig9754:7504..9994- (Ascophyllum nodosum dioecious)
ATGTCTCGCCGCGGCCTCCCATCTTACAGCGTCAAGCTTTTCAGGCCCCA
GGAGAACGCGAAGCGCATCCGGGCGAGTGCGTTCCGCATCCTCATGGAGC
CGCCACCGGAGGATCTCTTCATACAGGCCTGCAAGATGTGTGTCAAGGCC
AACATGGAGTTCGTTCCACCGTACGGCGCCCAGGGTGCCTTGTACCTGCG
GCCTCTACTTTTTGGATCGGGAGCCCGCATCGGCCTCCAGCCTTCAGACG
AATACACCCTGCTCGTTCTGGCCACCCCCGTGAGTAACTCCTACTACAAG
GGAGGCATGAAACCCACGTCCGCGGTGGTGATTGAAGACTACGACCGAGC
GGCGCCGAAAGGCGTGGGTAATGTGAAGGTTGCCGGGAACTACGCGGCAG
ACATGTTGCCGAACATACTCGCGAAGAAGAGCGGTTATCCTATCGCACTC
TATCTGGATGCCAAGACAAGCACCTTCGTGGAGGAATTTTCCACGTCCAA
CTTTTTCGCGGTGACGCACGACAACCGCTTCGTCACCCCCGACAGTCCCG
CCGTGCTCCCGTCCATCACAAACAAGTCCCTCATGGAGCTCGCGAAGGAT
GCGGGGATGGTCGTCGAGTGCCGGCCCATTCCTTTCTCGGAAGTGGCTTC
CTTCAAGGAGGTGGCGGCGTGCGGAACGGCCGTGGTGATGACATCGATCA
AGGAGATCGTCAAGGGCGAGGAGGTGATCACCATCAATGACGGTCTGGAC
GAGATGGGGCCCGTTTGCAAAAATCTTTTCGAGAGGGTTAGGGGCATTCA
GACGGGAGAACTCGAGGACAAGTTCGACTGGATGGTGCCCGTCTAG
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