mRNA_A-nodosum_M_contig974.19.2 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: D7FNW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW3_ECTSI) HSP 1 Score: 164 bits (416), Expect = 9.550e-45 Identity = 92/174 (52.87%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 1 DLGLIGSMEAAVDALGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPVPEWPLDTPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVE 522
D L+ +E +D LG STQW VAG+VG L+TRAD +TLV+VLGSL+NAVF K LKKTINQ VRPDG++L DPGMPSSHAM TQ LL +YALTASLWRVKAG HTL QV+VGA VGA DAVLWY C Y +
Sbjct: 4 DKTLLAGIELGLDVLGSSTQWAVAGAVGVALITRADVDTLVYVLGSLINAVFSKVLKKTINQ-------VRPDGAQLSDPGMPSSHAM--------------------------------TQTLLGMYALTASLWRVKAGFHTLPQVAVGAAVGAVDAVLWYHLCHPYLLSQAR 138
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A0G4EJI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJI9_VITBC) HSP 1 Score: 140 bits (354), Expect = 1.020e-33 Identity = 87/197 (44.16%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 52 STQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCP-VPEW-PLDTPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVEAFF----GGPDVPVEVAVGVCLMTFLTFGNVRRRISKL 624
S ++LV+G V LV R DA VWV+GSLLNAV GK LK+ N +R PD + + DPGMPSSHAMSL FL L+ I++ +P W LD VL+S YAL +++WRV+A LHT QV+VG VG + ++WY K +E F G P +P VG+CL+ LT G+V R+I KL
Sbjct: 136 SARFLVSGLVFLALVMRRDAAVTVWVIGSLLNAVLGKVLKRLFNHSR-------PDEATVSDPGMPSSHAMSLSFLSVSLI-----RAIIDADRLPAWWRLDKRWAVVLVSSYALLSAVWRVRANLHTSEQVAVGGAVGGTVGLVWYQLGKNGINKWMERQFVLMTGKPLLPWGWLVGICLLGSLTVGSVERKIHKL 320
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A4D9CV92_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV92_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.290e-33 Identity = 79/185 (42.70%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 91 LVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGL-EEHGIVNCPVPEWPLDTPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVEAF---FGGPDVPVEVAVGVCLMTFLTFGNVRRRISKLSRR 633
L+ R DA + + +G++LNA+ GK LK+ I +AR PDG+ L+DPGMPSSHAM+LF++ +L L ++ GI P P WPLD T L LY AS WRV +GLHT +Q+ +GA VG + W C + +V AF + G VPV VGV ++ LT G+V R+I+K R+
Sbjct: 2 LLVRRDAAIVNFTVGAILNAMLGKILKRLIKEAR-------PDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGIGMLP-PWWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILIGAGVGGGVGLAWERECAMVCDHQVGAFLARYKGGQVPVVYLVGVMVVGALTVGSVERKIAKAMRQ 178
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A7S2WS98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS98_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.910e-29 Identity = 72/166 (43.37%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 7 GLIGSMEAAVDALGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPV-PEWPLD-TPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCK 498
G +G++ A+G S + LV +V L+ R DA L WVLG+LLNAV K LK+ INQ+R P+G+R DPGMPSSHA SLFFL ++L + + P+ P + + VLL YA AS WRV AG HT QV VG +VG+ +LW++ C+
Sbjct: 33 GDMGALGVVASAIGSSARILVGSAVAVALLVRRDAAALGWVLGALLNAVLAKVLKRLINQSR-------PEGARSDDPGMPSSHAQSLFFLASFLAAAAQFWEPLPSPLLPTYTAGHSAGIAVLLLAYAWLASAWRVGAGYHTAPQVLVGGVVGSLTGMLWFFACR 191
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A6U4CT78_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CT78_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.070e-28 Identity = 82/221 (37.10%), Postives = 115/221 (52.04%), Query Frame = 1
Query: 16 GSMEAAVDALGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPVPE-------WPLDT-PQTQVLLS----LYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVEAFFGGPDVPVEVAVGVCLMTFLTFGNVRRRISKLSRRGGD 642
G E A A+G ST+W V+G V A LV R D L +V+GS+LNA+ K LK+ +NQ R PD + DPGMPSSHA SLFF+G Y + + P PE P P Q+ L+ Y ++WRV G HTL QV+VGA+VG++ A+ WY C+ ++AF P +P + + LT G V ++++L + D
Sbjct: 26 GPGERAAYAIGRSTKWTVSGGVAAALVLRRDVPALAFVVGSVLNALSSKLLKRLLNQKR-------PDTATQTDPGMPSSHAQSLFFIGGYAM-----RAVAATPAPEALAAALGLPAKAGPGLQLALNPVILAYISYCAVWRVAVGYHTLPQVAVGAVVGSAAALGWYAACRPLVHDFLKAFVPEP-LPFFAVAAIGVGGVLTVGKVGEKLNRLLAKRKD 233
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: K8Z811_NANGC (Dolichyldiphosphatase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z811_NANGC) HSP 1 Score: 121 bits (303), Expect = 2.530e-27 Identity = 69/148 (46.62%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 43 LGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGL-EEHGIVNCPVPEWPLDTPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLW 483
LG ST+W VA V L+ R DA + + +G++LNA+ GK LK+ I +AR PDG+ L+DPGMPSSHAM+LF++ +L L ++ GI P P WPLD T L LY AS WRV +GLHT +Q+ VGA VG + W
Sbjct: 130 LGKSTRWTVASLVAVMLLVRRDAAIVNFTVGAILNAMLGKILKRLIKEAR-------PDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGIGVLP-PWWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILVGAGVGGGVGLAW 269
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A7S1XLD3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD3_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.990e-24 Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 1
Query: 67 VAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPVPE-------WPLDT-PQTQVLLS----LYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVEAFFGGPDVPVEVAVGVCLMTFLTFGNVRRRISKLSRRGGD 642
V+G V A LV R D L +V+GS+LNA+ K LK+ +NQ R PD + DPGMPSSHA SLFF+G Y + + P PE P P Q+ L+ Y ++WRV G HTL QV+VGA+VG++ A+ WY C+ ++AF P +P + + LT G V ++++L + D
Sbjct: 70 VSGGVAAALVLRRDVPALAFVVGSVLNALSSKLLKRLLNQKR-------PDTATQTDPGMPSSHAQSLFFIGGYAM-----RAVAATPAPEALAAALGLPAKAGPGLQLALNPVILAYISYCAVWRVAVGYHTLPQVAVGAVVGSAAALGWYAACRPLVHDFLKAFVPEP-LPFFAVAAIGVGGVLTVGKVGEKLNRLLAKRKD 260
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: L1JU71_GUITC (acidPPc domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JU71_GUITC) HSP 1 Score: 108 bits (269), Expect = 2.920e-23 Identity = 67/194 (34.54%), Postives = 105/194 (54.12%), Query Frame = 1
Query: 52 STQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPVPEWPLD--TPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFC--KVYFTPEVEAFFGGPDVPVEVAVGVCLMTFLTFGNVRRRISK 621
+T+WLV+ + A L+ R DA T+ + G+L NA GK LK+ + + R PDG+ + DPGMPSSHAMSLFFL YL + +WP+ T T LL +++ ++ WRV+AG HT +Q+ VG+++G + + W++F + ++ F G ++ L G+V R+ISK
Sbjct: 28 NTRWLVSLTAAAFLIWRRDAVTIAAIGGALGNAALGKLLKRLLAEKR-------PDGAPVSDPGMPSSHAMSLFFLSLYLSAAINVWT-------DWPMAARTIVTSSLL-IFSTYSAAWRVRAGFHTPAQILVGSVLGGFNGMAWFYFNHQNMAALQRLDVFLKESSALPWALCGSLIVGALLVGSVERKISK 206
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A7S1NE02_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NE02_9EUGL) HSP 1 Score: 106 bits (265), Expect = 1.240e-22 Identity = 68/186 (36.56%), Postives = 98/186 (52.69%), Query Frame = 1
Query: 31 AVDALGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPVPEWPLDTPQTQVLLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVEAFFGGPDVPVEVAVGVCLMTFL 588
A+D +G +T++ V+ VG +LV + L V+G LNA K LK+ IN K RP+G+R KDPGMPSSHAMSL FL Y I L G+ WP T VL+ +Y+L + ++R++ G HT +QV VG G +A+ W F +V + +P + +GV + L
Sbjct: 30 AIDVVGSTTKYTVSALVGTSLVLIRTTDVLNMVVGGGLNAALCKVLKRVIN-------KSRPEGARYKDPGMPSSHAMSLGFLSCYTSIILLGLGLA------WPQVVAAT-VLMQVYSLASLVYRIQKGFHTPAQVQVGYTFGTVNALSWNHFFSHALDCKVGCYLQAGKLPWSMTLGVMFLVGL 201
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Match: A0A7S3XLH0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLH0_HETAK) HSP 1 Score: 106 bits (265), Expect = 6.380e-22 Identity = 77/191 (40.31%), Postives = 96/191 (50.26%), Query Frame = 1
Query: 37 DALGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKKTINQARDSFQKVRPDGSRLKDPGMPSSHAMSLFFLGTYLVIGLEEHGIVNCPVPEWPLDTPQTQV-LLSLYALTASLWRVKAGLHTLSQVSVGAIVGASDAVLWYWFCKVYFTPEVEAFF---GGPDVPVEVAVGVCLMTFLTFG 597
+A+G ST+W VA SV +LVT D TL V+GS+ NAV K LKK +NQ+R + + S GMPSSHAMSLFF +L I + CPV P V L YA+ AS WRV + LHTL QV+ GA+ G V P +AF GP VP V G+ L+ G
Sbjct: 104 NAIGKSTRWTVALSVAFSLVTLRDPATLSMVIGSVCNAVLSKILKKIVNQSRPELGEAVKESS-----GMPSSHAMSLFFFAGFLSIEAITNLATWCPV------NPLIVVCFLYTYAVIASAWRVFSELHTLPQVAAGALCGTLTGVGHARLAH----PAAQAFLLRAVGPAVPAPVVAGILFAAGLSIG 279 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig974.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig974.19.2 >prot_A-nodosum_M_contig974.19.2 ID=prot_A-nodosum_M_contig974.19.2|Name=mRNA_A-nodosum_M_contig974.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=212bp MEAAVDALGGSTQWLVAGSVGATLVTRADAETLVWVLGSLLNAVFGKALKback to top mRNA from alignment at A-nodosum_M_contig974:217116..220093- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig974.19.2 ID=mRNA_A-nodosum_M_contig974.19.2|Name=mRNA_A-nodosum_M_contig974.19.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2978bp|location=Sequence derived from alignment at A-nodosum_M_contig974:217116..220093- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig974:217116..220093- >mRNA_A-nodosum_M_contig974.19.2 ID=mRNA_A-nodosum_M_contig974.19.2|Name=mRNA_A-nodosum_M_contig974.19.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at A-nodosum_M_contig974:217116..220093- (Ascophyllum nodosum dioecious)back to top |