mRNA_A-nodosum_M_contig972.15.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: D8LJM2_ECTSI (PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2_ECTSI) HSP 1 Score: 346 bits (887), Expect = 9.780e-119 Identity = 172/226 (76.11%), Postives = 193/226 (85.40%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR GDMSHTASIL+LLLKLRASKSAAG+SLKTQELFLVVF TRY+DL F S YNSIMKVLYI+LTS I+YMIRE +PIKATYDK+QDSFLHW+FAVAPCA +G ++H W F S+ N+ W FSEVLEP AI+PQLMVLQRYREVENLTGHYVFLLGAYR LYI+NWVYRA YE GY+HH L+Y AG+VQTLLY DFFYYY +SKYYGGR+SLP+
Sbjct: 1 MNIFRLAGDMSHTASILMLLLKLRASKSAAGISLKTQELFLVVFVTRYVDLFFRFISWYNSIMKVLYITLTSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWSWWTVSMPFSSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADFFYYYAISKYYGGRMSLPA 226
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A835Z6E1_9STRA (ER lumen protein retaining receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E1_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.810e-96 Identity = 148/229 (64.63%), Postives = 182/229 (79.48%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVG---FIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR +GD+ H ASIL+LLLKLRASK+A+G+SLKTQELFL VF RYLDL T F+S+YNS+MKVLYI+LT+ I++M+R Q PI+ TYD +QD+FLH K+AVAPCA + +V +D R + W FS LE +AI+PQL+VLQRYREVENLTGHY+F LGAYR LYILNW+YR+F+E GYKHH ++YFAG+VQT LYVDFFYYY +SKY GG+ SLPS
Sbjct: 1 MNIFRLVGDLCHLASILLLLLKLRASKNASGISLKTQELFLAVFVCRYLDLFTTFYSVYNSVMKVLYIALTALIIHMMRAQSPIRGTYDASQDTFLHVKYAVAPCAALAALTMLVQGFDVR----------DLFWNFSIYLEAIAIVPQLIVLQRYREVENLTGHYIFFLGAYRALYILNWIYRSFHERGYKHHYVVYFAGIVQTALYVDFFYYYAISKYRGGKFSLPS 219
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: F0YI66_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI66_AURAN) HSP 1 Score: 288 bits (736), Expect = 7.600e-96 Identity = 148/226 (65.49%), Postives = 180/226 (79.65%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MN+FRF GDMSH SI+VL+L+LR SKSA G+SLKTQELFL+VF TRYLDL T F+S+YNS MKV YI+ T+ I+YMIR + P K+ YDK+QDSFLH+KFAVAPCA++ + C R L+ + W FS LE LAI+PQL VLQRYREVENLTGHYVF LGAYR LYILNWVYR++YE Y+H+ L+Y +G +QT LYVDFFYYYI+SKYYGG+L+LP+
Sbjct: 1 MNLFRFAGDMSHVVSIIVLILRLRVSKSAVGISLKTQELFLIVFMTRYLDLFTTFYSMYNSFMKVAYITATASIIYMIRFKEPYKSKYDKSQDSFLHFKFAVAPCAMLA-LFSCLIKRE-----LNPVDVLWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRFLYILNWVYRSYYEPFYRHNWLVYISGAIQTALYVDFFYYYIVSKYYGGKLTLPT 220
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A7S3ZPQ8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPQ8_9STRA) HSP 1 Score: 288 bits (737), Expect = 6.210e-95 Identity = 153/226 (67.70%), Postives = 178/226 (78.76%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFRF GDMSH SILVLLL+LR+SKSA G+SLKTQELFL+VF TRYLDL T F+SLYNS MKV YI+ T+YI++MIR Q P K+ YD +QDSFLH KFAVAPCA + C K LS + W FS LE LAI+PQL VLQRYREVENLTGHYVF LGAYR LYILNWVYR++YE Y+H+ L+Y +G VQT LYVDFFYYY++SKYYGG+L+LP+
Sbjct: 74 MNIFRFAGDMSHVVSILVLLLRLRSSKSAVGISLKTQELFLIVFVTRYLDLFTTFYSLYNSFMKVAYIASTTYIIWMIRFQEPYKSKYDASQDSFLHIKFAVAPCAGLALFA-CLV-----KGELSPIDILWTFSIFLEALAIVPQLFVLQRYREVENLTGHYVFFLGAYRGLYILNWVYRSYYEQFYRHNWLVYVSGAVQTALYVDFFYYYVVSKYYGGKLTLPT 293
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A1Z5KJM8_FISSO (ER lumen protein retaining receptor n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJM8_FISSO) HSP 1 Score: 279 bits (713), Expect = 3.130e-92 Identity = 142/226 (62.83%), Postives = 178/226 (78.76%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR GDMSH SILVLLL+LR +K+A G+S++T ELFL+VF TRYLDL T F+SLYNSIMK+LYI T+ I+Y I+ Q PIK+TYDK+QDSFL+W+FAVAPCAV+ + H + S SF+ + W FS LE +AI+PQL+VLQRYREVENLTG+Y+F +GAYR LYILNW+YRA +E Y+HH ++Y G++QTLLYVDFFYYY SK GGR +LP+
Sbjct: 3 MNIFRLAGDMSHVFSILVLLLRLRVAKNAQGISVRTHELFLIVFLTRYLDLFTTFYSLYNSIMKILYIVSTASIIYTIKFQEPIKSTYDKSQDSFLYWQFAVAPCAVLASVTHLIGSGISGFSFIELL---WTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRFLYILNWIYRANFEAHYQHHWVVYICGVLQTLLYVDFFYYYFKSKKSGGRFTLPT 225
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A7S2MV43_9STRA (ER lumen protein-retaining receptor n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MV43_9STRA) HSP 1 Score: 278 bits (710), Expect = 8.950e-92 Identity = 142/226 (62.83%), Postives = 174/226 (76.99%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR GDMSH SI+VLLL+LR +K+A G+S++T ELFLVVF TRYLDL T F+SLYNS MK+LYI T+ I+YMIR PI +TYDK QD+FLHWKFAV PCA++ I H + S +S W FS LE +AI+PQL+VLQRYREVENLTG+Y+F +GAYR LYILNWVYRA+YE Y+HH ++YF G++QTLLY DFFYYY+ SK GG+ SLP+
Sbjct: 3 MNIFRLSGDMSHVFSIIVLLLRLRVAKNAQGISVRTHELFLVVFVTRYLDLFTTFYSLYNSCMKILYIVTTAAIIYMIRFSEPICSTYDKAQDTFLHWKFAVLPCAIIATITHMIGSGLS----ISPIELLWTFSIYLESVAILPQLIVLQRYREVENLTGNYIFFMGAYRALYILNWVYRAYYEPFYQHHFVVYFCGVLQTLLYADFFYYYVKSKAKGGKFSLPT 224
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A7S1UWG6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWG6_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.280e-91 Identity = 140/226 (61.95%), Postives = 173/226 (76.55%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR GDMSH SI+VLLL+LR +K+A G+S++T ELFL VF TRYLDL T F+S YNSIMK+LYI T+ I+Y I+ Q PIK+TYDK QD+FLHWKFAVAPCA+V F+ H + + + + W FS LE +AI+PQL+VLQRYREVENLTG++VF +GAYR LYILNW+YRA E GYKHH ++YF G++QTLLY DFFYYY+ S GGR LP+
Sbjct: 23 MNIFRLAGDMSHVFSIIVLLLRLRVAKNAQGISVRTHELFLCVFVTRYLDLFTTFYSFYNSIMKILYIGSTASIIYTIKFQEPIKSTYDKAQDTFLHWKFAVAPCAIVAFLTHMIGSGIAKFELMELL---WTFSIYLESIAILPQLIVLQRYREVENLTGNFVFFMGAYRFLYILNWIYRAHTEHGYKHHWVVYFCGVLQTLLYADFFYYYVKSVRSGGRFKLPT 245
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: B7G303_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G303_PHATC) HSP 1 Score: 275 bits (704), Expect = 7.060e-91 Identity = 138/226 (61.06%), Postives = 173/226 (76.55%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR GDM H SI+VLLL+LR +K+A G+SL+T ELFL+VF TRYLDL +FFS+YNS+MKVLYI T+ IVY IR + PIK+TY+K+QD+FLHWKFAVAPC + I H ++ + W FS LE +AI+PQL+VLQRYREVENLTG+Y+F +GAYR LYI+NW+YRA E GYKHH ++YF G+VQTLLY DFFYYY+ SK GG+ +LP+
Sbjct: 3 MNIFRLAGDMCHVFSIIVLLLRLRVAKNAQGISLRTNELFLLVFVTRYLDLFFNFFSIYNSVMKVLYIVSTASIVYTIRFKEPIKSTYEKSQDTFLHWKFAVAPCFAIALITHLIGSKR-----FDMVELLWTFSIYLESIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIVNWIYRAHTEKGYKHHWVVYFCGVVQTLLYADFFYYYLKSKSKGGKFTLPT 223
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A7R9ZM06_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM06_9STRA) HSP 1 Score: 275 bits (703), Expect = 4.500e-90 Identity = 137/226 (60.62%), Postives = 176/226 (77.88%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFRFLGDMSH SI+VLLL+LR +++A G+S+++ ELFL VF TRYLDL F+S+YNS+MK++YI T+ I+Y I+ + PIK+TYDK+QD+FLHW+FAVAPCA++ F H K F +I W+FS LE +AI+PQL+VLQRY+EVENLTG+Y+F +GAYR LYILNW+YRA E GYKHH ++YF G++QTLLY DFFYYYI +K G RL LP
Sbjct: 48 MNIFRFLGDMSHLFSIIVLLLRLRVARNAQGISVRSHELFLCVFVTRYLDLFFRFYSIYNSVMKIIYIGSTASIIYTIKYKEPIKSTYDKSQDTFLHWRFAVAPCAIIAFATHM--IAKGMKGFDAI-ELLWMFSIYLEAIAILPQLIVLQRYKEVENLTGNYIFFMGAYRALYILNWIYRANTEKGYKHHWVVYFCGVLQTLLYADFFYYYIKAKARGNRLQLPQ 270
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Match: A0A7S2R233_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R233_9STRA) HSP 1 Score: 273 bits (697), Expect = 8.460e-90 Identity = 138/226 (61.06%), Postives = 171/226 (75.66%), Query Frame = 1
Query: 1 MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDLVTHFFSLYNSIMKVLYISLTSYIVYMIREQMPIKATYDKTQDSFLHWKFAVAPCAVVGFIVHCWDTRHSWKSFLSITNYGWVFSEVLEPLAIIPQLMVLQRYREVENLTGHYVFLLGAYRVLYILNWVYRAFYEFGYKHHPLLYFAGMVQTLLYVDFFYYYILSKYYGGRLSLPS 678
MNIFR GDMSH SI+VLLL+LR +K+A G+S++T ELFLVVF TRYLDL T ++S+YNS MKVLYI T+ I+YMIR Q PI +TYDK QD+FLHW+FAV PC V I H T + I W FS LE +AI+PQL+VLQRYREVENLTG+Y+F +GAYR LYI NWVYRA++E Y+HH ++YF G++QTLLY DFFYYY+ SK GG+ +LP+
Sbjct: 3 MNIFRLAGDMSHVFSIIVLLLRLRVAKNAQGISVRTHELFLVVFVTRYLDLFTTYYSVYNSCMKVLYILTTAAIIYMIRFQEPICSTYDKAQDTFLHWRFAVLPCICVALITHSLGTHFRFN----IMEVLWTFSIYLEAIAILPQLIVLQRYREVENLTGNYIFFMGAYRALYIANWVYRAYHEPFYQHHYVVYFCGILQTLLYADFFYYYLTSKAKGGKFTLPT 224 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig972.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig972.15.1 >prot_A-nodosum_M_contig972.15.1 ID=prot_A-nodosum_M_contig972.15.1|Name=mRNA_A-nodosum_M_contig972.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=227bp MNIFRFLGDMSHTASILVLLLKLRASKSAAGVSLKTQELFLVVFATRYLDback to top mRNA from alignment at A-nodosum_M_contig972:117359..122350+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig972.15.1 ID=mRNA_A-nodosum_M_contig972.15.1|Name=mRNA_A-nodosum_M_contig972.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4992bp|location=Sequence derived from alignment at A-nodosum_M_contig972:117359..122350+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig972:117359..122350+ >mRNA_A-nodosum_M_contig972.15.1 ID=mRNA_A-nodosum_M_contig972.15.1|Name=mRNA_A-nodosum_M_contig972.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=681bp|location=Sequence derived from alignment at A-nodosum_M_contig972:117359..122350+ (Ascophyllum nodosum dioecious)back to top |