mRNA_A-nodosum_M_contig97.29.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig97.29.1
Unique NamemRNA_A-nodosum_M_contig97.29.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 1.040e-120
Identity = 315/1036 (30.41%), Postives = 491/1036 (47.39%), Query Frame = 1
Query:  415 DVMEVHRMLTHPSEDITRKTAEMMGIETTGQWGACETCFQVKAKRHAVPKKTDERASVRGQRFFVDH------SSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLS-IKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQW----IDGPKKTGGDAIGSDNRGMKSAGDEI------IVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHE------EGGAEPALGSANLEGPALXXXRK----------------LTIDGNIPPILSSRTR----------SRRPHTGVEGEALHCFLPAIEAEEENGVEDALA----------------CDDGGQMAMQATLDTPE-PRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVAR-PKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            D+ E H +  H  E + R TA+ +G +  G   AC  C   KA R  +  +T  R+  +  R FVD       +S+GG  Y +I  DD TR   + F++ KSD  +A  + +A        S ++ +R+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++     SPYE+W+ +   A     F    Y R   R  K+ PKGE C ++G  R+ P     VL  R+  I E + V W       P       I     G + + D +      +V RG     ++         + E E                                           EG      G   +  P      +                  ++   PP  + R R          + R +  V          A+  +   G+  +L                   D  ++  +   D    P + ++A+ S+    W  A   E+ G++    +   A+ P    V+  + ++K K  + G++ K K RLVA+GF Q  GV Y   +S T   A  R+++A+A   + EL H+D EQAF+++++D E+++++P       G V RLNK++YGL QA R    +   ++  IGFEQ+ ++PCV R ++  E   +V +HVDDIL +A  K+  +   A LG     K++G+  + +GC   R+R+   ++  Q  Y+ S+++RF+V +T+ IP        S  ++ R+  E E     P+RE VG+LMW A  TRPDI+ AVRAVAR    P  +H KA  KIL YLL T    + +            Y D+DF +  + RRS+SGA++++A   + W S+ Q+  +  TSEAEY+A+ + VKE LF+  + +F+ PS +   ++V EDNEGAI LA N  +S R+K I+V+HH +R+ ++   + V +V SE+QHAD+LTK L
Sbjct:  186 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAEEGGEDSDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEVESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 1210          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 3.830e-119
Identity = 363/1191 (30.48%), Postives = 555/1191 (46.60%), Query Frame = 1
Query:    1 DSGTTFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKM---------VKMDDVAYVPGLSRNLLSTVKAV--EQWG------------KPLIYYRNKAVLGGLFSATGVRRIPRQEAALEVNLTENGLVKIASGAALRASASRDVMEVHRMLTHPSEDITRKTAEMMGIETTGQWGACETCFQVKAKRHAVPKKTDERASVRGQRFFVDH------SSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLS-IKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEI----------IVERGT-----------PQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGG---------------------------AEPALGSANLEGPALXXXRKLTIDGNIPPILSSRTRSRRPHTGVEGEALHCFLPAIEAEEENGVEDALACD----DGGQMAMQATLDTP-EPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVAR-PKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            D+GT FHM+ + A M   K      N            G G +  ++   G    +         V++ +V Y P L  NL S       E W             K  + ++N     G+  A+  R        +   LT +           +   + DV E H +  H  + + R TA+ +G E  G+   C  C   KA +  + ++T  R+  +  R FVD       +S+GG  Y +I  DD TR   + F+K KSD   A  S +A        S ++ +R+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++    KSPYE+W+ +   A     F    Y R   R  K+ PKGE C ++G  R+ P     VL  R+  I E + V W   P +                              +V RG            P   V E+  E         XXXXXXXXXXXXXXXXX                +  + GG                           A P  G        L        + +   +   RTR++     V  +++   +  I       V  AL  +    D  ++  +   D   EP +  +A+ S+    W  A   E+ G++    +    + P    V+  + ++K K  + G++ K K RLVA+GF Q  GV Y   +S T   A  R+++A+A   + EL H+D EQAF+++++D E+++++P         V RLNK++YGL QA R    +   ++  IGFEQ+ ++PCV R ++  E   +V +HVDDIL +A  K+  +   A LG     K++G+  + +GC   R+RK   ++  Q  Y+ S+++RF++ +T+ IP +     L+  D  R+  E+E     P+RE VG+LMW A+ TR DI+ AVRAVAR    P  +H KA  KIL YLL T    + +       +    Y D+DF +    RRS+SGA++ +A   + W SR Q+  +  TSEAEY+A+ + VKE LF+  + +F+ PS++   ++V EDNEGAI LA N  +S R+K I+V+HH +R+ ++   + V +V S++QHAD+LTK L
Sbjct:  235 DTGTAFHMTDSLACMKDLKPCHKSVN------------GIGGVSCEISFSGTLELVFVTADSEFSVELKNVLYSPNLGYNLFSPSAEFDGESWNGLGGPDGVMTAFKGQVTFQN---FDGMLIASAYRLGEASVGTVLAALTPSNP---------KHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRDVTWEVLPSQLXXXXXXXXXXXXXXXXXXXXXXXXXEVWPLVGRGVAHTLLKREAVPPGTEVVEV--ESXXXXXXXXXXXXXXXXXXXXXXXXXSVSSPVPEIDVNSGEIETGDPGGDDEXXXXXXXXXXXXXXXXXXRPVETEASPPTGRRPRHVAELADFNTAAREND--EVREGRTRAQT--RAVNQQSVPGLMATIGPISGTEVLYALLSEQRAGDETELPKELVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPAS-----LNNDD--RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1384          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM)

HSP 1 Score: 399 bits (1026), Expect = 8.740e-116
Identity = 340/1140 (29.82%), Postives = 524/1140 (45.96%), Query Frame = 1
Query:    1 DSGTTFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGGLFSATGVRRIPRQEAALEVNLTENGLVKIASGAALRASASRDVMEVHRMLTHPSEDITRKTAEMM-GIETTGQWGA--CETCFQVKAKRHAVPKKTDERASVRGQRFFVD------HSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCIRTDNGGEFEGEFQRELDR----RSITHEHTPPDTPQYNGVAERALGLSREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLTIDGNIPPIL---SSRTRSRRPHTGVEGEALHCFLPAIEAEEENGVED--------ALACDDG----GQMAMQATLDTPE--PRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKTTKI--PTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            DSG T HM+  R  +  YK       V IADG  + V G G + +     G     +KM DV ++PGL R LLS  +  E+ G  + + +    +     A  + +   +   L+        V+ A           +    H  + H ++D   KT     G+ T        C  C + K      P ++  + +   Q    D        S GG  YV+ FVDD +++ V  F+ KKS+      + +  Y       IKC+R+DNG EF     +E+DR      I H+ T P +PQ NGVAER      EKA  ++              WA+A+  +  + N+S TTST    +P+EL F      DHLR FG+VGYA     +  K+ PK  KC+F+G   N      +   +  V + RS  + ER+    +DG  ++      +D    +   DE++           +L QEQQ                                          HEE  A P   S +     L   R  T   +    L     R R RRP   +   AL       + E+ N  +         A   +DG      +A  A++   +  P   +QA +S E  +W KA  +E+    +N  +  V R      +G + ++ +K  + G V +YK RLVA+GF Q  GV +   YS       IR++L++  AK       DA+ AFL +D+ E++++E+P         + +L+KAIYGL QA    +         IGF    A+ CV+ K    +  + V ++VDD++  AK    +D     L   FK+K++G+  + +G  I  +R    L   Q  Y++ +  RF+ +    +  P  SG+  L++   P    E+E+MR  PYR  +G L++  T TRPD+A  V  ++RF ENPG  H KA +++L+YL  TKE+GI Y G    + MEAYTD+D+G+ LD RRS+SG ++M+    + + S+ Q   A  ++EAEY+ALS   +EVL+ R + + +    +VGA  V+EDN+GAI LA+N   + RTK ++++HH +R+      + V YV +EDQ AD+LTK L
Sbjct:  270 DSGATAHMTPHRNDLFEYKDLDSDVEVTIADGKKIRVVGTGSVRL----TGIDGTRIKMIDVLFIPGLDRQLLSVSRLAER-GMIVEFQKKSCTIWNKSKAIALGKKVGKAYMLDCEKDMAHYVEYAG-------VDSEWELWHARMGHLNKDALAKTQRATTGMPTLDHKSMTICGGCMKGKQTVAHFPSRSLSKTTKVLQLVHTDVMGPMKTKSKGGARYVLTFVDDYSKYIVAYFITKKSEVPVKFKTFMNLYENQWGERIKCLRSDNGTEF---VNKEMDRLCALNGIVHQKTVPYSPQQNGVAERMNRTIMEKARSML-----YYKGITTMWWAEAVSTSVYLINRS-TTSTHSSMTPHELAFRDKPRLDHLRVFGSVGYAHVDKAKRTKLEPKSFKCMFLGYAENSKGYRVYDLESNKVKVTRSLKLDERE----VDGIYESTPTESTTDIHSTEDV-DEVV-----------QLEQEQQSATQA-----------------------------PVGSVEDNHEEDAAMPEAESDDSMRHGLTTYRT-TPGADFSDDLVFHPERERVRRPRDLIL--ALEDEYKVNDEEDPNNDDHFWPPSPKRARVDEDGLLAEAVLAYAASVGDADDAPTTYQQAMKSNEASKWIKAMNSELKAHADNGSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTK-DNYVYVCLYVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGM-KLTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVAMEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRTMLKDLGHE-QVGATQVWEDNQGAIALASNAGYNARTKHVDIRHHFIRENVARDIILVGYVGTEDQLADMLTKAL 1337          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: Q572I3_PHYIN (Putative polyprotein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=Q572I3_PHYIN)

HSP 1 Score: 399 bits (1024), Expect = 1.550e-115
Identity = 344/1134 (30.34%), Postives = 522/1134 (46.03%), Query Frame = 1
Query:    1 DSGTTFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGGLFSATGVRRIPRQEAALEVNLTENGLVKIASGAALRASASRDVMEVHRMLTHPSEDITRKTAEM-MGIE--TTGQWGACETCFQVKAKRHAVPKKTDERASVRGQRFFVDHS------SLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRS-ITHEHTPPDTPQYNGVAERALGLSREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIG---SDNRGMKSAGDEIIVERGTPQLNVQELGQE---QQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLTID---GNIPPILSSRTRSRRPHTGVEGEALHCFLPAIEAEEENGVEDALACDDGGQMAMQATLDTPEPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITY--GGQGCG---LCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            DSG T HM+  R  +  Y+    G NV IADG  L V G G +++     G   K ++M DV ++PGL R LLS  K  E+ G  + + R+  V+ G  +A    +   +   L+    E   V+ A           +    H  + H ++D   KT    +GI     G    C  C + K      P ++  R +   +    D        S GG  YV+ FVDD +RF V  F+K KS+  + L    A Y T     +KC+R+DNG EF  +   EL +R+ I H+ + P +PQ NGV+ER      EKA  ++            + WA+A+  A  + N+S  TS + D +PYEL F      +HLR FG+ GYA    V   K+ PK  KC F+G   N      +      V + RS  + ER+     D      G  I    +D+  +  +G E    +  P    +E  Q+     L L  +                                    H E        S     P L        D   G+  P  SS  R+R    G+  EA+  +  +I      GV D                    P    +A  S E  EWR+A ++E+     N  +  V R      +G + ++ +K  ++G V +YK RLVAQGF Q  G+ +   YS       IR +LA+       +   DA+ AFL + +   +Y+++P   +   G    L KAIYGL QA    N          GF+   A+ CV+ K     A + V ++VDD++  AK +  +      L   FK+K++G+A + +G  I  +R+   L   Q  Y++ +V+RF+ +  K  + P A+ +  LS+   P   +E+ EM   PYR  +G LM+  T TRPDIA  V  +ARF E+PG  H KA +++LQYL  T+  GI Y  G  G G   +  EA+TD+D+G+ +D RRS+SG ++M+    + + S+ Q   A  ++EAEY+ALS   +EVL+ R + + M    +VGA  V+EDN+GAI LA+N     RTK ++++HH +R+  +   ++V Y+ ++ Q AD+LTK L
Sbjct:  251 DSGATSHMTPHRNDLFGYEALDSGINVTIADGKKLRVAGTGTVKL----TGLDGKRIRMVDVLHIPGLDRRLLSVGKLAER-GMSVAFQRSSCVIWGRNAAIASGKKVGKAFLLDCQQEEAHFVQYAG-------PDSEWELWHARMGHLNKDALTKTQRSTIGIPHVKNGNETLCGGCMKGKQTVTTFPSRSLTRTTRVLELVHTDVMGPMRTISKGGAKYVLTFVDDYSRFVVAYFMKSKSEVGSKLKEFKALYETQWGERLKCLRSDNGTEFVNKTVLELCKRNGIVHQRSVPYSPQQNGVSERMNRTIMEKARSMLH-----YKSMSTQWWAEAVSTAVYLINRSTNTS-NSDVTPYELSFQVKPRMEHLRVFGSQGYAHVNDVIRTKLEPKSFKCTFLGYAENVKGYRVYDMDASKVKVTRSVKLDEREVGGIYDTQSPASGTVIHVTRNDDTIVPISGVERTPAQDEPMEEAEEPAQDIEMDDLELERNAEIQQLPAPEEPRLNGLDLATFHSQPPSFHEDRMVFHPE-----TERSTRPREPLLLLGNGDDEDVERGSDGP--SSPKRTRIDEDGLLAEAVLAYAASI-----GGVPDT-------------------PNTYAEAIASNEAGEWRRAMQSELNSHSRNGTWTLVPRGTTTRSIGCRWVFTKKRDENGRVIRYKARLVAQGFKQKFGIDFFETYSPVANMNSIRAVLAVCVTCGYIMEQLDADTAFLNSCLVNLVYMDVPLGLENAEGMKCNLLKAIYGLKQAASAWNKTIHRVFLQNGFKCCGADQCVYVKR-SKNAFVYVCLYVDDMIIAAKTRDEIREVKNALKSAFKMKELGEAKFILGMEIDHDRECGTLMIKQTRYIDDIVERFNQRNAKMVEYPCAANL-KLSKMMSPTTEKERAEMWSRPYRSLIGCLMYITTCTRPDIAYVVTQLARFLEDPGTQHWKAAIRVLQYLKSTRHHGIVYKSGTSGFGTQAVKAEAFTDADWGSNIDDRRSVSGVMVMIGNAPVVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRAMLKDMGHE-QVGATQVWEDNQGAIALASNAGYHARTKHVDIRHHFIRENVERSTIKVAYIDTKQQLADMLTKAL 1332          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA)

HSP 1 Score: 389 bits (998), Expect = 1.820e-115
Identity = 301/931 (32.33%), Postives = 462/931 (49.62%), Query Frame = 1
Query:  625 GGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAIILM--EELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLTIDGNIPPILSSR--TRSRRPHTG-------VEGEALHCFLPAIEAEEENGVEDA--------LACDDGGQMAMQATLDTPEPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPE---EFQEFPGAVGR------LNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            GG +Y V F+DD +R   V F+KKK++         AD        IK +R+DNGGE+ G  F+  L ++ I HE T P TPQ NG+AER      E A  ++  E +D       +K WA+A+  +  + N+    +T   K+PYE+ + K     +L+ FGA+GY      +  K+  K  KC F+G        R F   T  V +VR+   +E  +           GD + ++  G    GDE +     P       GQ Q LT+   E                                  QHE                       +T D  I P  S    TRSR  H          EG       P+    +   V  A        LA ++G  MA    +    P+   +A   Q+ DEW+KA  +E+  ++ N  +K V +P  +  +G + ++  K  + G+V +YK RLVA+G+ Q  G++Y   YS       IR +LA  +A+  E+   D + AFL   ++EEIY+E+ E   E  E   A G       L +++YGL QA R  N      + ++GFE A  +PCV+ +  +GE E +V ++VDD+L  ++ KA +    A + +KF++KDMG A + +G  I  N + R L   Q  Y ES++K+   +  K    P   GV  L++ADEP+  E+K +M+  PYR  VG+LM+ +  TRPDI+ AV  ++RF ENPG  H  A +K+++YLL TK+ GI Y G   G  +EAY+D+D+    D RRS+SG +LML    + W S  Q+  A  ++EAEY+ALS+ VKE +++R++ + +    +VGA  ++EDN+GA+ LA N      TK I++++H +RD + + +V++ YV +++Q AD +TK L
Sbjct:   37 GGCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKKFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSLVEMARCMLYHEGID-------KKWWAEAVNTSAWIINR--IPNTVAVKTPYEIVYQKKPQLKNLKVFGALGYEHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRVFNVATGQVKIVRTVKFMETTST----------GDFM-TEVEGDDKDGDEDVA---APHATAPSHGQTQTLTIFNDEVVPL------------------------------QHE-----------------------VTTDTAIVPAPSHSMITRSRTRHIEETTDPKEAEGRKKQIVAPSAIGTKRQKVNQARVKPSDELLAIEEGQLMAATEEV----PKTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKDRLVAKGYSQRHGINYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGL 883          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6A3JDE6_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JDE6_9STRA)

HSP 1 Score: 385 bits (990), Expect = 2.720e-114
Identity = 301/930 (32.37%), Postives = 458/930 (49.25%), Query Frame = 1
Query:  625 GGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAIILM--EELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYARQ-SVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLTIDGNIPP------ILSSRTRSRRPHTG---VEGEALHCFLPAIEAEEENGVE-------DALACDDGGQMAMQATLDTPEPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPE---EFQEFPGAVGR------LNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            GG +Y V F+DD +R   V F+KKK++          D      L IK  R+DNGGE+ G  F+  L ++ I HE T P TPQ NG+AER      E A  ++  E +D       +K WA+A+  +  + N+   T T   K+PYE+ + K     +L+ FGA+GY      +  K+  K  KC F+G        R     T  V +VR+   +E  +           GD + ++  G    GDE +     P       GQ Q LT+   E                                  QHE                       +T +  I P      I  SRTR     T     EG       P+    +   V        D L   +GGQ+ M AT + P  +   +A   Q+ DEW+KA  +E+  ++ N  +K V +P  +  +G + ++  K  + G+V +YK RLVA+G+ Q  G  Y   YS       IR +LA  +A+  E+   D + AFL   ++EEIY+E+PE   E  E   A G       L +++YGL QA R  N      + ++GFE A ANPCV+ +  +G+ E +V ++VDD+L  ++ KA +    A + + F++KD+G A + +G  I  + + R L   Q  Y ES++K+F  +  K    P    V  L++ADEP+  E+K +M+  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+++YLL TK+  I Y G   G  +EAY+D+D+    D RRS+SG +LML    + W S  Q+  A  ++EAEY+ALS+ VKE +++R++ + +    +VGA  ++EDN+GA+ LA N     RTK I++++H +R    + +V + YV +++Q AD +TK L
Sbjct:   40 GGCTYAVTFIDDFSRHVTVYFMKKKTEVLEKFKMFKTDMENATGLKIKRHRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSIVEMARCMLYHEGID-------KKWWAEAVNTSAWMINRIPNTVTV--KTPYEIVYQKKPQLKNLKVFGALGYGHMPDEKRRKLDAKAFKCRFLGYEDGVKGYRVLNVATGQVKIVRTVKFMETTST----------GDFM-TEVEGDDKDGDEDVA---APHATAPSHGQTQTLTIFNDEVVPL------------------------------QHE-----------------------VTTETAIVPAPSHSMITRSRTRPNEETTDPEEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQL-MAATEEVP--KTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGTDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLELAEAEGEDDVDCMLLQSLYGLKQASRVWNETIDKHLNSMGFEPADANPCVYTRG-EGDDECIVCLYVDDMLIASRQKAVIASVKAGIAENFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPSV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVSIVYEGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSMFQKTVALSSTEAEYMALSDCVKECVWIRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRKKVVSNEVELEYVDTKNQLADFMTKGL 886          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA)

HSP 1 Score: 383 bits (984), Expect = 3.000e-113
Identity = 299/930 (32.15%), Postives = 461/930 (49.57%), Query Frame = 1
Query:  625 GGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAIILM--EELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLTIDGNIPP------ILSSRTRSRRPHTG---VEGEALHCFLPAIEAEEENGVE-------DALACDDGGQMAMQATLDTPEPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            G  +Y V F+DD +R   V F+KKK++         AD        IK +R+DNGGE+ G  F+  L ++ I HE T   TPQ NG+AER      E A  ++  E +D       +K WA+A+  +  + N+   T T   K+PYE+ + K     +L+ FGA GY      +  K+  K  KC F+G        R     T  V +VR+   +E  +           GD +    R  K   DE +     P       GQ Q +T+ + E                                  QHE                       +T +  I P      I  SRTR     T     EG       P+    +   V        D L   +GGQ+ M AT + P  +   +A   Q+ DEW+KA  +E+  ++ N  +K V +P  +  +G + ++  K  + G+V +YK RLVA+G+ Q  G+ Y   YS       IR +L   +A+  E+   D + AFL   ++ EIY+E+PEE +E             V  L +++YGL QA R  N     ++ ++GFE A A+PCV+ +  +GE E +V ++VDD+L  ++  A +    A + +KF++KDMG A + +G  I  + + R L   Q  Y ES++K+F  +  K    P   GV  L++ADEP+  E+K +M+  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+++YLL TK+ GI Y G   G  +EAY+D+D+    D RRS+SG +LML +  + W S  Q+  A  ++EAEY+ALS+ VKE +++R++ + +    +VGA  ++EDN+GA+ LA N     RTK I++++H VR+ + + +V++ YV +++Q AD +TK L
Sbjct:   61 GDCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVTYTPQQNGLAERMNRSLVEMARCMLYHEGID-------KKWWAEAVNTSAWIINRIPNTVTV--KTPYEIVYQKKPQLKNLKVFGAHGYGHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRILNVATGQVKIVRTVKFMETTST----------GDFMTEVERDDK---DEDVA---APHATAPSRGQTQTITIFKDEVVPL------------------------------QHE-----------------------VTTETAIVPAPSHSTITRSRTRYIEATTDPEEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQL-MAATEEVP--KTYAEATTRQDQDEWKKAIASELESLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGL 905          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6A3RIG2_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=35 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RIG2_9STRA)

HSP 1 Score: 385 bits (988), Expect = 1.140e-110
Identity = 334/1147 (29.12%), Postives = 525/1147 (45.77%), Query Frame = 1
Query:    1 DSGTTFHMSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMVKMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGGLFSATGVRRIPRQEAALEVNLTENGLVKIASGAALRASASRDVMEVHRMLTHPS----EDITRKTAEMMGIETTGQWGACETCFQVKAKRHAVPKKTDERASVRGQRFFVDHSSL---------GGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLTIDGNIPPILSSRTRSRRPHTG-------VEGEALHCFLPAIEAEEENGVE-------DALACDDGGQMAMQATLDTPEPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPE---EFQEFPGAVGR------LNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            DSG + HM+  R    + K+      + IADG  +     G + + L      T    + DV Y+P +  +L+S  K  E   K ++   +K      +    V    R     ++    + +   A+      S       VH  L H      E +      +  +  T     C      K +     +  ++     G    + HS +         GG +Y V F+DD +R   V F+KKK++         AD        IKCIR+DNG E+ G  F+  L ++ I HE T P TPQ NG+AER       ++++ M           +K WA+A+  +  + N+   T T   K+PYE+ + K     +L+ FGA+GY      +  K+  K  KC FMG        R     T  V +VR+   +E  +     G   T  +  G D        DE++     P       G+ Q LT+   E                                  QHE    E A+  A                    P  S+ TRSR  H          EG       P+    +   V        D L   +GGQ+ M AT + P+       ++ Q  DEW+KA  +E+  ++ N  +  V +P  +  +G + ++  K  + G+V +YK RLVA+G+ Q  G+ Y   YS       I  +LA  +A+  E+   D + AFL   ++EEIY+E+PE   E  E   A G       L +++YGL QA R  N      + ++GFE A A+PCV+ +  +GE E +V ++VDD+L  ++ K  +    A + +KF++KD+G + + +G  I  + + R L   Q  Y ES++K+F  +  K    P   GV  L++ADEP+  E+K +M+  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG     A +K+++YLL TK+ GI Y G      +EAY+D D+    D RRS+SG +LML    + W S  Q+  A  ++EAEY+ALS+ V+E +++R++ E +    +VGA  ++EDN+GA+ LA N     RTK I++++H +R+   + +V + Y+ +++Q AD +TK L
Sbjct:  258 DSGASSHMTSVRDKFVSMKELKTPVRITIADGKKIDAVAMGTVGMKLMDGTSVT----LSDVLYIPEVEGSLISVAKLAE---KDVVAQFSKDKCVFRYGDATVMEAKRCGNVYKLKTVGDEVCHAAT-----TSRKEPWAVVHARLGHIPYKRYEQLLTMADGVPRVADTPSDRVCAGYCMGKMREDNFSRNPEKTVKSAGVLDLI-HSDVMGPMQTKTPGGCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKMFKADMENATGRKIKCIRSDNGREYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERM-----NRSLVEMARCKLYHEGIDKKWWAEAVNTSAWIINRIPNTVTV--KTPYEIVYQKKPQLKNLKVFGALGYVHIPDEKRRKLDAKVFKCRFMGYEDGVKGYRVLDVETGQVKIVRTVKFMETTST----GDFMT--EVEGDDK-------DEVVA---APHATAPSHGETQTLTIFNDEVVPL------------------------------QHEVT-TETAIVPA--------------------PSHSTITRSRTRHIEETTDPEEAEGRKKQIVAPSAIGTKRQKVNQARVKPSDELLAIEGGQL-MAATEEVPKTYAEETTRQDQ--DEWKKAIASELESLIANKTWMLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSILAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLELAEAEGEDAIVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQKTVIASVKAGIAEKFRIKDLGRSRFILGIEIDYDMERRTLGISQKAYTESIIKKFAQENVKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKRWDAGIKVVRYLLKTKDVGIVYDGLLVAQ-LEAYSDEDWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVQECVWMRRLLEDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSNEVELEYMDTKNQLADFMTKGL 1310          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 3.520e-110
Identity = 309/982 (31.47%), Postives = 472/982 (48.07%), Query Frame = 1
Query:  535 VKAKRHAVPKKTDERASVRGQRFFVDHS------SLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLS-IKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKT--------------GGDAIGSD--------------------NRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHEEGGAEPALGSANLEGPALXXXRKLT--IDGNIPP-----ILSSRTRSRRPHTGVEG-EALHCFL-PAIEAEEENGVEDALACDDGGQMAMQATLDTP-EPRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVAR-PKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYGGQGC--GLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            V+  + A+ +K  E   +R  R FVD        S+GG  Y +I  DD TR   + F++ KSD  +A  S +A        S ++ +R+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++    KSPYE+W+ +   A     F    Y +   R  K+ PKGE C ++G  R+ P     VL  R+  I E + V W   P +               GG+   +D                    N  +  +G+ I V      ++   +G+          X                                Q+ +          A    P     R +    D N P      +   RTR++      +    L   L P    E  N +       D  ++  +   D   EP + ++A++S+    W  A   E+ G++    +    + P    V+  + ++K K  + G++ K K RLVA+GF Q  GV Y   +S T   A IR+L+A+A   D EL H+D EQAF+++ +D E+++++P       G V RLNK++YGL QA R    +   D+  IGFEQ+ ++PCV R ++  E   +V +HVDDIL +A  K+        LG     K++G+  + +GC   R+R+   ++  Q  Y+ S+++RF + +T+ IP        S A++ R+  E EE    P+RE VG LMW A  TRPDI+ AVRAVAR    P     KA  KIL YLL T    + Y        +    Y D+DF +    RRS+SGA++++A   ++W S  Q+  +  TSEAEY+A+ + VKE LF+  + +F+ PS+    ++V EDNEGAI LA N  +S R+K I+V+HH +R+ ++   + + +V SE QHAD+LTK L
Sbjct:  311 VQLDQAAIARK--ELPLLRIGRVFVDLGGKKAVVSVGGKYYPMIVKDDFTRRAWIYFLRNKSDAASAFRSFLASVRADGIPSLVETVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPYP-FLKPAYCKWQ-RPSKLFPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRDVTWEALPSQLPPPQPPLPIEIAEEGGEESDNDVETEVWPLVGRGVAHTLLRNNAAVVPSGEAIDV---VESVDAGSVGRSPSPXXXXXXXVPSVSSPAPEFTDGDGQGGQDVGEIESMGPGDQETDPVXXXXXEVEAEASPPVARRPRHVAELADFNNPARENDEVREGRTRAQTRAVNQQSVPGLVATLGPVFATEIINSLLAEQRAGDAVELPKELVQDVESEPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLAVKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDIL-YAGTKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPA-------SPANDNRSVMEDEEAGDVPFREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKAL 1276          
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.110e-107
Identity = 289/954 (30.29%), Postives = 453/954 (47.48%), Query Frame = 1
Query:  643 VIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLS-IKCIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVKFSTADHLRRFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQW----IDGPKKTGGDAIGSDNRGMKSAGDEI------IVERGTPQLNVQELGQEQQLTLHEHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHE------EGGAEPALGSANLEGPALXXXRK----------------LTIDGNIPPILSSRTR----------SRRPHTGVEGEALHCFLPAIEAEEENGVEDALA----------------CDDGGQMAMQATLDTPE-PRNRRQAKESQEWDEWRKAEETEMLGMVENCVYKQVAR-PKDKLVVGTKMLYKRKIGQDGEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*NNKFCDDMTAIGFEQAKANPCVFRKVVDGEAEMVVIVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYNMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKTTKIPTASGVPTLSEADEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKILQYLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSISGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKDINVKHHLVRDASDARKVRVVYVRSEDQHADLLTKPL 3303
            +I  DD TR   + F++ KSD  +A  + +A        S ++ +R+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL  E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++     SPYE+W+ +   A     F    Y R   R  K+ PKGE C ++G  R+ P     VL  R+  I E + V W       P       I     G + + D +      +V RG     ++         + E E                                           EG      G   +  P      +                  ++   PP  + R R          + R +  V          A+  +   G+  +L                   D  ++  +   D    P + ++A+ S+    W  A   E+ G++    +   A+ P    V+  + ++K K  + G++ K K RLVA+GF Q  GV Y   +S T   A  R+++A+A   + EL H+D EQAF+++++D E+++++P       G V RLNK++YGL QA R    +   ++  IGFEQ+ ++PCV R ++  E   +V +HVDDIL +A  K+  +   A LG     K++G+  + +GC   R+R+   ++  Q  Y+ S+++RF+V +T+ IP        S  ++ R+  E E     P+RE VG+LMW A  TRPDI+ AVRAVAR    P  +H KA  KIL YLL T    + +            Y D+DF +  + RRS+SGA++++A   + W S+ Q+  +  TSEAEY+A+ + VKE LF+  + +F+ PS +   ++V EDNEGAI LA N  +S R+K I+V+HH +R+ ++   + V +V SE+QHAD+LTK L
Sbjct:    1 MIVKDDFTRRIWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAEEGGEDSDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEVESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 943          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL9_9PHAE1.040e-12030.41Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KZH7_9PHAE3.830e-11930.48Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
H3H572_PHYRM8.740e-11629.82Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
Q572I3_PHYIN1.550e-11530.34Putative polyprotein n=1 Tax=Phytophthora infestan... [more]
A0A6G0QQ26_9STRA1.820e-11532.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3JDE6_9STRA2.720e-11432.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3YGI7_9STRA3.000e-11332.15Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3RIG2_9STRA1.140e-11029.12Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JB16_9PHAE3.520e-11031.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKK1_9PHAE1.110e-10730.29Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig97contigA-nodosum_M_contig97:378260..381625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra85763
PFAMsRVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size3303
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.4e-43
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QGIS@4776|Peronosporales
Descriptiontransposition, RNA-mediated
Cds size2250
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870490.8000703-UTR-A-nodosum_M_contig97:378259..3782801680870490.8000703-UTR-A-nodosum_M_contig97:378259..378280Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig97 378260..378280 +
1680870490.8489914-UTR-A-nodosum_M_contig97:380593..3816251680870490.8489914-UTR-A-nodosum_M_contig97:380593..381625Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig97 380594..381625 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870490.8129478-CDS-A-nodosum_M_contig97:378280..3785461680870490.8129478-CDS-A-nodosum_M_contig97:378280..378546Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 378281..378546 +
1680870490.8261847-CDS-A-nodosum_M_contig97:378591..3789161680870490.8261847-CDS-A-nodosum_M_contig97:378591..378916Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 378592..378916 +
1680870490.8393648-CDS-A-nodosum_M_contig97:378934..3805931680870490.8393648-CDS-A-nodosum_M_contig97:378934..380593Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig97 378935..380593 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig97.29.1prot_A-nodosum_M_contig97.29.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig97 378281..380593 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig97.29.1

>prot_A-nodosum_M_contig97.29.1 ID=prot_A-nodosum_M_contig97.29.1|Name=mRNA_A-nodosum_M_contig97.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=750bp
MSHTRAGMSAYKKASPGTNVEIADGNILPVDGFGRIEVDLDQPGRTTKMV
KMDDVAYVPGLSRNLLSTVKAVEQWGKPLIYYRNKAVLGGLFSATGVRRI
PRQEAALEVNLTENGLVKIASGAALRASASRDVMEVHRMLTHPSEDITRK
TAEMMGIETTGQWGACETCFQVKAKRHAVPKKTDERASVRGQRFFVDHSS
LGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKC
IRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLSREKAI
ILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTDGDKSPYELWFVK
FSTADHLRRFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLL
VRSRNIVERQAVQWIDGPKKTGGDAIGSDNRGMKSAGDEIIVERGTPQLN
VQELGQEQQLTLHEHETQEALSELEGETQGALSEHEEETQEALSENEREQ
QHEEGGAEPALGSANLEGPALPALRKLTIDGNIPPILSSRTRSRRPHTGV
EGEALHCFLPAIEAEEENGVEDALACDDGGQMAMQATLDTPEPRNRRQAK
ESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQD
GEVEKYKCRLVAQGFWQVEGVHYTVKYSLTPATALIRMLLAMAAAKDGEL
RHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRC*
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mRNA from alignment at A-nodosum_M_contig97:378260..381625+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig97.29.1 ID=mRNA_A-nodosum_M_contig97.29.1|Name=mRNA_A-nodosum_M_contig97.29.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3366bp|location=Sequence derived from alignment at A-nodosum_M_contig97:378260..381625+ (Ascophyllum nodosum dioecious)
GATTCCGGCACCACATTCCACATGTCGCACACCCGCGCCGGAATGTCTGC CTATAAGAAGGCGTCGCCGGGGACGAACGTTGAGATCGCCGACGGTAATA TTCTACCGGTGGACGGGTTCGGGAGAATCGAGGTTGATCTGGACCAACCG GGACGTACGACCAAGATGGTGAAGATGGACGATGTCGCGTATGTGCCGGG ACTCTCCCGAAATCTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGTA AACCGTTAATCTACTACAGAAATAAAGCCGTTTTGGGGTTCCCGGGGGAG GAATCGCTTGTTTTCAAATTCTGCCCCCGTAGGGGACTGTTTTCAGCTAC AGGCGTGAGACGGATCCCGAGGCAGGAAGCGGCTCTAGAGGTAAATCTGA CGGAGAACGGGTTGGTGAAGATCGCTTCGGGAGCGGCGCTGAGAGCGAGC GCATCCCGTGACGTCATGGAGGTCCATCGCATGCTTACGCACCCGAGCGA GGATATTACAAGAAAGACGGCCGAGATGATGGGGATCGAGACGACGGGCC AGTGGGGGGCATGCGAGACGTGTTTCCAAGTTAAGGCGAAGCGACATGCC GTGCCAAAGAAGACAGACGAACGGGCGAGCGTGAGAGGACAGCGATTCTT CGTCGACGTGGGCGGGCCGATATAGCACTCGAGTCTCGGCGGGAACAGCT ACGTCGTCATTTTCGTGGACGACTGCACCCGCTTCAAGGTGGTAAAGTTC GTAAAGAAGAAGAGTGACACAACGGCCGCTCTCTTGTCTCTGATCGCTGA TTATATTACACCGCAGAAGCTGTCGATCAAGTGCATACGGACGGATAATG GTGGCGAGTTTGAGGGAGAATTTCAGCGCGAATTGGACCGGCGCAGCATC ACGCACGAGCATACCCCGCCAGACACGCCCCAGTACAATGGGGTGGCCGA ACGTGCGCTTGGGCTTTCAAGAGAAAAGGCGATCATCCTGATGGAGGAGT TAGACGACGTCATCAACGTGCCGCGAGAGAAGCTGTGGGCTCAGGCAATG CTTTTCGCGTGCGACGTCACCAACAAGTCAGTCACAACTTCAACGGATGG GGATAAGTCGCCGTACGAACTATGGTTTGTAAAATTCTCTACTGCCGATC ATTTGCGACGGTTTGGAGCGGTGGGATACGCGCGACAGAGCGTGCGTGAA CATAAGATGGCGCCAAAAGGAGAGAAATGCGTATTCATGGGAATTCCCCG AAACTTCCCCACTGGCACTGTAAGCGTGCTACTCGTAAGGTCAAGAAATA TCGTGGAAAGGCAGGCGGTGCAGTGGATCGACGGGCCTAAAAAGACCGGG GGTGACGCCATCGGCAGTGACAACCGCGGCATGAAGTCGGCGGGAGATGA AATCATTGTGGAGAGAGGGACTCCGCAGCTCAATGTTCAGGAGCTGGGAC AGGAACAGCAGTTAACGCTGCACGAACACGAGACGCAGGAGGCGCTTTCG GAACTCGAAGGGGAGACGCAGGGGGCGTTATCGGAACATGAGGAGGAGAC GCAGGAGGCGCTTTCGGAAAACGAGCGAGAGCAGCAGCATGAGGAGGGGG GAGCGGAACCTGCATTGGGATCGGCAAATTTGGAGGGACCGGCCCTACCC GCGCTGCGTAAGCTCACCATCGACGGCAATATCCCGCCCATACTGTCATC ACGTACAAGGAGTCGAAGACCCCACACCGGTGTGGAGGGAGAAGCGTTGC ATTGTTTCTTGCCGGCGATCGAGGCCGAAGAGGAAAACGGCGTGGAGGAT GCGTTGGCGTGCGACGACGGGGGCCAGATGGCTATGCAGGCGACGCTAGA TACACCGGAACCGAGAAATCGGCGGCAGGCGAAGGAATCGCAGGAATGGG ACGAATGGCGGAAGGCAGAGGAGACTGAGATGCTTGGAATGGTCGAGAAC TGCGTTTATAAGCAGGTGGCTCGGCCGAAGGATAAGCTCGTGGTTGGCAC CAAAATGCTATACAAGCGAAAAATCGGACAGGACGGCGAGGTCGAGAAGT ACAAGTGTCGACTTGTCGCTCAAGGGTTCTGGCAGGTGGAAGGTGTGCAC TACACGGTAAAGTACTCGCTCACGCCAGCAACCGCGTTAATCCGGATGCT TTTGGCGATGGCAGCGGCCAAGGACGGAGAGCTGCGCCATTTCGACGCAG AGCAGGCATTTTTGAAGGCGGATATTGACGAAGAAATATACATTGAGATC CCTGAGGAGTTCCAGGAGTTTCCAGGGGCAGTGGGACGGCTGAACAAGGC CATTTACGGACTCGTGCAGGCGGGGAGGTGCTAGAACAATAAGTTCTGTG ACGACATGACGGCGATTGGATTCGAGCAGGCAAAGGCGAACCCGTGCGTG TTCCGCAAGGTCGTTGACGGTGAGGCGGAGATGGTGGTGATCGTACACGT AGACGACATTCTTGCCCACGCAAAAGACAAAGCGACGATGGATAGATTCG CGGCTGAGCTTGGGCAGAAGTTCAAATTGAAGGACATGGGCGACGCCGGG TACAACATGGGCTGTCACATCACAAGGAACCGCAAGACGCGCGAGTTGAA GTTCGACCAACACTTATACGTGGAGTCAATGGTAAAAAGGTTTGACGTCA AGAAGACAACTAAGATACCGACTGCGTCGGGGGTGCCGACGCTCTCAGAG GCGGATGAACCGCGGAACCCAGAGGAGAAGGAGGAAATGAGGAAGTTCCC GTACCGGGAGGCAGTGGGGGCGCTCATGTGGACGGCGACGATGACACGGC CGGATATTGCGTGCGCCGTACGCGCTGTGGCCAGGTTCTGCGAAAACCCT GGGCCGGCGCATAAGAAGGCAGTGATGAAGATCCTCCAGTATCTACTTCA CACGAAAGAATGGGGGATTACGTACGGTGGACAGGGCTGTGGACTTTGCA TGGAAGCTTATACGGACTCGGATTTCGGAGCCTGCCTGGACACAAGACGA TCGATTTCGGGTGCGGTGTTGATGCTGGCGAAGGGAGCGATCAGCTGGCA CTCAAGGATGCAAGAAGTGACAGCATCGGGTACATCGGAGGCAGAATACG TTGCCTTATCAGAGGTGGTAAAGGAAGTACTATTTTTGAGACAGGTGCAG GAGTTTATGGAACCGTCGATGAGGGTCGGTGCAGTGAATGTGTTCGAAGA TAATGAGGGGGCCATCAAGCTGGCCACAAACAAGCACGCTAGCCGTAGGA CTAAGGACATTAATGTAAAACATCATCTAGTAAGGGACGCGTCTGACGCG CGAAAGGTTAGAGTAGTGTACGTGAGGTCGGAAGATCAGCACGCGGATTT GCTCACAAAGCCGCTA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig97:378260..381625+

>mRNA_A-nodosum_M_contig97.29.1 ID=mRNA_A-nodosum_M_contig97.29.1|Name=mRNA_A-nodosum_M_contig97.29.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2250bp|location=Sequence derived from alignment at A-nodosum_M_contig97:378260..381625+ (Ascophyllum nodosum dioecious)
ATGTCGCACACCCGCGCCGGAATGTCTGCCTATAAGAAGGCGTCGCCGGG
GACGAACGTTGAGATCGCCGACGGTAATATTCTACCGGTGGACGGGTTCG
GGAGAATCGAGGTTGATCTGGACCAACCGGGACGTACGACCAAGATGGTG
AAGATGGACGATGTCGCGTATGTGCCGGGACTCTCCCGAAATCTGCTGTC
TACTGTCAAAGCAGTGGAGCAATGGGGTAAACCGTTAATCTACTACAGAA
ATAAAGCCGTTTTGGGGGGACTGTTTTCAGCTACAGGCGTGAGACGGATC
CCGAGGCAGGAAGCGGCTCTAGAGGTAAATCTGACGGAGAACGGGTTGGT
GAAGATCGCTTCGGGAGCGGCGCTGAGAGCGAGCGCATCCCGTGACGTCA
TGGAGGTCCATCGCATGCTTACGCACCCGAGCGAGGATATTACAAGAAAG
ACGGCCGAGATGATGGGGATCGAGACGACGGGCCAGTGGGGGGCATGCGA
GACGTGTTTCCAAGTTAAGGCGAAGCGACATGCCGTGCCAAAGAAGACAG
ACGAACGGGCGAGCGTGAGAGGACAGCGATTCTTCGTCGACCACTCGAGT
CTCGGCGGGAACAGCTACGTCGTCATTTTCGTGGACGACTGCACCCGCTT
CAAGGTGGTAAAGTTCGTAAAGAAGAAGAGTGACACAACGGCCGCTCTCT
TGTCTCTGATCGCTGATTATATTACACCGCAGAAGCTGTCGATCAAGTGC
ATACGGACGGATAATGGTGGCGAGTTTGAGGGAGAATTTCAGCGCGAATT
GGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGACACGCCCCAGT
ACAATGGGGTGGCCGAACGTGCGCTTGGGCTTTCAAGAGAAAAGGCGATC
ATCCTGATGGAGGAGTTAGACGACGTCATCAACGTGCCGCGAGAGAAGCT
GTGGGCTCAGGCAATGCTTTTCGCGTGCGACGTCACCAACAAGTCAGTCA
CAACTTCAACGGATGGGGATAAGTCGCCGTACGAACTATGGTTTGTAAAA
TTCTCTACTGCCGATCATTTGCGACGGTTTGGAGCGGTGGGATACGCGCG
ACAGAGCGTGCGTGAACATAAGATGGCGCCAAAAGGAGAGAAATGCGTAT
TCATGGGAATTCCCCGAAACTTCCCCACTGGCACTGTAAGCGTGCTACTC
GTAAGGTCAAGAAATATCGTGGAAAGGCAGGCGGTGCAGTGGATCGACGG
GCCTAAAAAGACCGGGGGTGACGCCATCGGCAGTGACAACCGCGGCATGA
AGTCGGCGGGAGATGAAATCATTGTGGAGAGAGGGACTCCGCAGCTCAAT
GTTCAGGAGCTGGGACAGGAACAGCAGTTAACGCTGCACGAACACGAGAC
GCAGGAGGCGCTTTCGGAACTCGAAGGGGAGACGCAGGGGGCGTTATCGG
AACATGAGGAGGAGACGCAGGAGGCGCTTTCGGAAAACGAGCGAGAGCAG
CAGCATGAGGAGGGGGGAGCGGAACCTGCATTGGGATCGGCAAATTTGGA
GGGACCGGCCCTACCCGCGCTGCGTAAGCTCACCATCGACGGCAATATCC
CGCCCATACTGTCATCACGTACAAGGAGTCGAAGACCCCACACCGGTGTG
GAGGGAGAAGCGTTGCATTGTTTCTTGCCGGCGATCGAGGCCGAAGAGGA
AAACGGCGTGGAGGATGCGTTGGCGTGCGACGACGGGGGCCAGATGGCTA
TGCAGGCGACGCTAGATACACCGGAACCGAGAAATCGGCGGCAGGCGAAG
GAATCGCAGGAATGGGACGAATGGCGGAAGGCAGAGGAGACTGAGATGCT
TGGAATGGTCGAGAACTGCGTTTATAAGCAGGTGGCTCGGCCGAAGGATA
AGCTCGTGGTTGGCACCAAAATGCTATACAAGCGAAAAATCGGACAGGAC
GGCGAGGTCGAGAAGTACAAGTGTCGACTTGTCGCTCAAGGGTTCTGGCA
GGTGGAAGGTGTGCACTACACGGTAAAGTACTCGCTCACGCCAGCAACCG
CGTTAATCCGGATGCTTTTGGCGATGGCAGCGGCCAAGGACGGAGAGCTG
CGCCATTTCGACGCAGAGCAGGCATTTTTGAAGGCGGATATTGACGAAGA
AATATACATTGAGATCCCTGAGGAGTTCCAGGAGTTTCCAGGGGCAGTGG
GACGGCTGAACAAGGCCATTTACGGACTCGTGCAGGCGGGGAGGTGCTAG
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