mRNA_A-nodosum_M_contig97.11.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A6H5L960_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L960_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.050e-58 Identity = 113/177 (63.84%), Postives = 137/177 (77.40%), Query Frame = 1
Query: 1 RRLDSTGLVQSFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAWEDAQ-ADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKALGRKN--IRRARGGGIMEKFFGMEAEARSAEA 522
RRLD G+V+ FSIR++F K+GVLVGVPGAFTPTCS VHLPE+VDKS LA+KGAE+VAF++VND YVM+AWED+Q A KV+ML+DGNGDL+AALGMMVDL+ GMG RCKRF+CVV+ GVVT+ ++ D VSASAV K L + R R GG+ EK G E E R+AEA
Sbjct: 94 RRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSAVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMSDTVE-LVSASAVEKVLSGTDGGERGPRKGGLFEKLLGREVETRAAEA 269
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A661GIM2_9GAMM (Glutathione-dependent peroxiredoxin n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GIM2_9GAMM) HSP 1 Score: 131 bits (330), Expect = 8.600e-32 Identity = 68/136 (50.00%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 31 SFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAW-EDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKAL 435
+ S ELF K+ VLV VPGAFTPTCS HLP +++ + +A+KG + VAF++VND++VM AW +D DGK+ ML+DGNGD A ALG+ +D T GMG+R KRF + D GV T+V V A G S L
Sbjct: 24 AMSADELFTGKKVVLVSVPGAFTPTCSASHLPGFLENAAAIAAKGVDSVAFVSVNDVFVMHAWGKDQNVDGKITMLADGNGDYARALGLEMDGTAFGMGMRSKRFALIADDGVATHVAV--EAPGQFEVSKAESVL 157
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A835ZEG2_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG2_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.320e-31 Identity = 67/133 (50.38%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 40 IRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAWEDAQA-DGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKAL 435
+ ELF+ K+ VL GVPGAFTPTCS HLP YV +EL +KG + VA ++VND++VM+AW ++Q+ KV+ML+DGNG+L+AALG++ D + GMG RCKRF VV+ VV ++ V + SA A+ L
Sbjct: 86 VTELFKGKKVVLFGVPGAFTPTCSNNHLPGYVTHIDELKAKGVDTVACVSVNDIFVMKAWGESQSVSAKVVMLADGNGELSAALGLLTDKSGAGMGRRCKRFAMVVNDNVVKHIAVDTKGLQDSSAEAILDKL 218
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A8J3DIK6_9HYPH (Glutathione-dependent peroxiredoxin n=1 Tax=Limoniibacter endophyticus TaxID=1565040 RepID=A0A8J3DIK6_9HYPH) HSP 1 Score: 128 bits (321), Expect = 1.440e-30 Identity = 61/132 (46.21%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 28 QSFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAW-EDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASA 420
Q ELF K+ VL GVPGAFTPTC+ HLP Y+D + + +KG + +A +AVND++VM+AW + A+GK++ L+DG+GD ++G+ DLTPHGMG+R KRF +V+ G VT + + D V + A
Sbjct: 23 QEVDTAELFAGKKVVLFGVPGAFTPTCNNNHLPGYLDNFDAIKAKGVDTIAVVAVNDVFVMKAWAKHTGAEGKIVFLADGSGDFVKSVGLDADLTPHGMGVRSKRFSAIVEDGKVTALNIEDSPGQAVESGA 154
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A537QJE4_9PROT (Glutathione-dependent peroxiredoxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QJE4_9PROT) HSP 1 Score: 127 bits (319), Expect = 2.690e-30 Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 RRLDSTGLVQSFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAW-EDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVS---ASAVSKAL 435
++L S G V+ F+ E+F+ KR VL+ VPGAFTP CSQ HLP YVD + ++ +KG + +A +AVND +VM AW D +A+GKV ML+DG+GD ALG+ +DL+ G+G+R KR+ +VD GVV + V ++ G V A A+ KAL
Sbjct: 15 KQLTSEG-VKEFTTDEIFRGKRIVLIAVPGAFTPACSQRHLPGYVDNAADIKAKGIDEIACVAVNDAFVMGAWGRDQKAEGKVRMLADGSGDFTRALGLELDLSKGGLGVRSKRYSMLVDDGVVKSLNV-EQQPGQVDISGAEAMLKAL 161
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: UPI0019A4BD63 (Peroxiredoxin n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019A4BD63) HSP 1 Score: 127 bits (319), Expect = 2.690e-30 Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 1 RRLDSTGLVQSFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAWEDAQ-ADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKALGR 441
+R+ + G V E F K+ +LVGVPGA+TPTCS+ HLP YV ++EL +KG + MA ND +VMRAW D Q A+GKV ML+DGNG+L ALG+ VDL+ + +G RCKRFV D GV++ + + G +S + L R
Sbjct: 15 KRVLADGSVVELDTAEEFAGKQMILVGVPGAYTPTCSKEHLPSYVAHADELRAKGVGGIVCMATNDHFVMRAWADEQEAEGKVDMLADGNGELTRALGLEVDLSGYKLGPRCKRFVAKFDDGVLSSLDI--ETGGGISETGAEACLAR 160
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: UPI000DB9AD5C (peroxiredoxin n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DB9AD5C) HSP 1 Score: 127 bits (318), Expect = 3.350e-30 Identity = 60/136 (44.12%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 28 QSFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAWEDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKAL 435
+ +++++ KR VL VPGAFTP CS H+P +V K++++ +KG + +A MAVND +VM AW+++Q K++ML+DGNG+LA ALG+ +D + GMG+R KRF V++ G V Y+ V ++ SA V K L
Sbjct: 23 EDIALKDVVSGKRVVLFAVPGAFTPGCSNTHMPGFVVKADDILAKGVDTIACMAVNDAFVMGAWQESQNAEKILMLADGNGELAKALGLTLDASGFGMGVRSKRFAMVINDGKVEYLGVDEKGVEKSSAEEVLKHL 158
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: UPI00105823EE (peroxiredoxin n=1 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI00105823EE) HSP 1 Score: 126 bits (317), Expect = 4.850e-30 Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 28 QSFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAW-EDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKALG 438
Q S LF K VL GVPGAFTPTCS HLP +V+ + L +KGA++VA MAVND +VM AW +D DGKV+M++DG+ D LG+ +DLT G+G+RC+RF V G VT+V V A G S LG
Sbjct: 23 QETSTEALFGGKTVVLFGVPGAFTPTCSAKHLPGFVENFDALKAKGADVVACMAVNDAFVMAAWGKDQGVDGKVVMIADGSADFTKKLGLELDLTARGLGIRCQRFALVAKDGKVTHVAV--EAPGAFEVSRAEAVLG 158
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A7Y5NSR0_9DELT (Glutathione-dependent peroxiredoxin n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NSR0_9DELT) HSP 1 Score: 126 bits (317), Expect = 5.450e-30 Identity = 69/136 (50.74%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 37 SIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAW-EDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVSASAVSKALGR 441
S F +KR V+ GVPGAFTPTCS HLP +V+K+EEL +KGA++VA ++VND +VM AW + +A GKV+ L+DGN D ALG+ +DLT + MG+R KRF+ V D GV T V V G S+ AL R
Sbjct: 30 STNTFFANKRVVVFGVPGAFTPTCSAKHLPGFVEKAEELRAKGADVVACVSVNDAFVMGAWGRENKAFGKVVFLADGNADFVRALGLELDLTANVMGVRSKRFLAVFDNGVCTSVDV--EQPGKFEVSSAEAALKR 163
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Match: A0A7Y1TCK3_9GAMM (Glutathione-dependent peroxiredoxin n=2 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1TCK3_9GAMM) HSP 1 Score: 126 bits (316), Expect = 6.610e-30 Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 31 SFSIRELFQDKRGVLVGVPGAFTPTCSQVHLPEYVDKSEELASKGAEMVAFMAVNDMYVMRAW-EDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMGLRCKRFVCVVDRGVVTYVKVGDRATGPVS-ASAVSKAL 435
+ S +LF K+ VLV VPGAFTPTCS HLP +VD++ +L SKG + +A MAVND++VM AW +D KV+ML+DGNG+ A ALG+ +D T GMG+R +RF VVD GV T+V V VS A A+ +AL
Sbjct: 24 AISTDDLFAGKKVVLVSVPGAFTPTCSMNHLPGFVDQAAQLQSKGVDTIACMAVNDVFVMDAWGKDRGVGDKVMMLADGNGEYARALGLELDGTGFGMGMRGQRFAIVVDDGVATHVGVEAPGQFEVSKAEAILEAL 160 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig97.11.2 >prot_A-nodosum_M_contig97.11.2 ID=prot_A-nodosum_M_contig97.11.2|Name=mRNA_A-nodosum_M_contig97.11.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=130bp MVAFMAVNDMYVMRAWEDAQADGKVIMLSDGNGDLAAALGMMVDLTPHGMback to top mRNA from alignment at A-nodosum_M_contig97:178396..189344- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig97.11.2 ID=mRNA_A-nodosum_M_contig97.11.2|Name=mRNA_A-nodosum_M_contig97.11.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10949bp|location=Sequence derived from alignment at A-nodosum_M_contig97:178396..189344- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig97:178396..189344- >mRNA_A-nodosum_M_contig97.11.2 ID=mRNA_A-nodosum_M_contig97.11.2|Name=mRNA_A-nodosum_M_contig97.11.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at A-nodosum_M_contig97:178396..189344- (Ascophyllum nodosum dioecious)back to top |