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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 188 |
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Cds size | 114 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870486.1280289-UTR-A-nodosum_M_contig9675:1045..1118 | 1680870486.1280289-UTR-A-nodosum_M_contig9675:1045..1118 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig9675 1046..1118 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870486.1436884-CDS-A-nodosum_M_contig9675:1118..1133 | 1680870486.1436884-CDS-A-nodosum_M_contig9675:1118..1133 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9675 1119..1133 - |
| 1680870486.1578221-CDS-A-nodosum_M_contig9675:9607..9706 | 1680870486.1578221-CDS-A-nodosum_M_contig9675:9607..9706 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig9675 9608..9706 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9675.1.1 >prot_A-nodosum_M_contig9675.1.1 ID=prot_A-nodosum_M_contig9675.1.1|Name=mRNA_A-nodosum_M_contig9675.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=38bp
RRDHKLALRTAFVALLLVTTSVVSAAATIQPPEGEGV* back to topmRNA from alignment at A-nodosum_M_contig9675:1046..9706- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig9675.1.1 ID=mRNA_A-nodosum_M_contig9675.1.1|Name=mRNA_A-nodosum_M_contig9675.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8661bp|location=Sequence derived from alignment at A-nodosum_M_contig9675:1046..9706- (Ascophyllum nodosum dioecious)
CGCCGAGACCACAAATTAGCATTGCGCACGGCATTCGTAGCGTTACTCTT
GGTCACGACTAGCGTTGTCAGCGCCGCGGCAACGATCCAGCCGCCGGAGG
TGAGAAGGAATGTGCCATCACACGCGAGCGACTTTGCTGGAACGATCACG
CGGACAAGTCTGAGAGGGAAGGGACTTTTCAGCGGAAATATCGCATGAAG
AGGCGCACCTTCAAGAAGTTAGTCGCTCTTCTTAGGGCTGCGCTCGAGCG
AGACTACTGTAAAAACTCTGTACTTGCGGTTTCGCAGTCACTCAAAATTG
ATTTGTAGTACAGTACGAGCAGAGCCTATAAAATACGTGTACTCGGAGTA
TGTATTTTACAAGTGCTACAACAGATGGACCGATTCAGTTTGTGGCAGAC
GGGCATATATAGCTCCAAGCGCTGTTCTACTTTATTCAAGATCTGTGAAC
ACTGTTGATTGGGTCTGCTCTTCGATCTATTGACATCTACTCGCGGCTTT
CTTATGTATTGTTTTGTCTGTGGCGTTTATGGTTAGTCCTGAGGGTTCAA
ACATCCCGAAAAAGGTGTTCAAAATGTCCCGAGGCGTATCATACTCATTT
GAGCGGGGTTCCCTTTTCCAAGCATTTACCTCGACTATTACGGTGGAACA
TATTAATCGGAACCAAATTTTAAAATCACCATTTTGCTCGTATCTCGATG
AATATTCGTTTGTTTTTCGTAAATGACAGCGCAAATTAATCGTGATAAGT
ACACCTTTCTGGCAAATGTTTTACCTTTTCAAACCGATATTGTGACGACG
TGTTATGCAAGTTATTTAGACGTGGCTCGTGTGTACAGCGCAAACGAAAA
AACTAGCCATTTTCTTGGTACTCTAGACCCGACATTAAGCGCGTGTATTT
GGGATTAAAATATACGGCAGTCACGAATATCACCCGAATAAGTCCTGTCT
GTTCATACTTGATACATATTCCTCATCATGGGCTCTATATTGGAATCCTC
CCCCCGCGCCTGATGCAATCGCGCTGCCAACCGATTTCACCGTTCAAAAT
TTCTGGTTCAATCACGGCTCGATTTCATTATCAACCTCCTCTTCCTGCAT
ATAATTTGCCATTTCCTCCTCAAGTCCATCCTCTCTTTCATCACCCTCTG
GTCCTTCCTCTTTGTCGAAATCGACAACCACAAGGTTCCCTATTGTTCCA
GACAGTTTTCCACCGCCGTACTTCTCTATCCAAGCGTTCATTTCGCCGAT
GGCGTGGCGCACCAAGTTGGCACAGTTTGCCGGCTTCCAACCCCCTTCTT
GTCCCTTCCACTCCGAGTCCCCGTAAAAGCCCTTTCGGAGCTGTTCCCAG
ACTTCCGACATCTTACGCTTCAACTGAAAGTTGAGACTGACATACCGCTT
ACCATGCGCCCAGAACAGCTCGATCGGCTGAAACGATGGCATGTATGGCG
GCGTCCAAATCAACTCCCACCCCTTACACTCATAAAGGTTTCCACCTTCT
CCATCAACTTTTCTGGGTGATGAAGCTGGAAAAACTGGCGAGTTGCCAGC
GCAACTTCTGCGACACTGACGCCACCTTCTTGATTCGCATTGGGAAACGA
AGAGTCAAGTTCCTGGGGTATCTCAAATCGGTGCGTCAGAGTGTCCCCGT
TTTCATTCTGGCGCTCAACTTTGATGCTTCTTGCCTTGTACGAGCGCAAG
AGACCAACATTGTACTTCTTCGTGTTGGTTTCGGGCACTCTGACTTCAGC
GTCGCAACCGTGGTGATAAGAAGCGTTGTCAAGTACAAGAATCATTTTTT
TACCAGGGAAAACCTCGTTAAAGGCTGGGGTAAGACGGTGCTGAAGCCAC
TCCATGAACATGGCATCGGTCATCGCGGCGTGGTAATCCCCCTTCGCCGA
TTTTGCTTGCCAGAGGAATTCTGCGGTTTTCTCGTCCTGTAAAGCAAAAT
CCTTTCCTCCTTGCTTCCCCTTACTCTTTGGCTTCGCTTTGAACCAGCCC
TCTTCTATCGGGAAGTCACTCACTGGAACACGCGTTACCAAGGGCCCCCA
TTTTGTGATGGCGTGGACAATAATCATGCGTTGTCCTTTGCCTGTTGTCC
GACCGAAAGCACTGTCAACCTCCCCGTTCTTATCGGCAAGGAAGTACGAA
TACACTGAAGCGTGCGCTTGGTGGACAAAACTCTCGTCCATGTACACGAC
GACAGCTTCACCTGCATCTTCAGCTCTCTTCGCTCTGTCCATTTCGGCCA
AGAACATGCGAATCCGAGTAAGCCTTTTCTCATCCAAAGGAGCTTTTTTT
ATCCTGCCTCTTCGACGGCGGTACCCCATGCGATAGAGCAGCGCACTCAC
CGCACGGCATGACATAGGCCGCGAGTCATCACTGTTCTCTTGCATCCACT
CAACAACGGACCGCCGGAAGATTTGTCGTCCGGCCGTGTGCTCGGCGTTG
ATGAATTGCCGAAGTTTTGATTCCAGGTCGGCTGAAATCGTCCGGCGCGC
GTCGTTATTGGTGTTAACCTTGCCCCTCCCGGTTCCTGTCGTTGCAAACA
GCGTCTGATCATGCCACCAATCATTGTAAACACGATGAACTTTTTCCTGC
TCACCTTGAGCGTACTCGACACCTGCCGACAAAATAAATCGCACATGGAA
ATGACATCAAAATCTTTGAAAGTAGTACTCCAGGGCGGGCCTCTTGGGAG
CAACGGCGTTTTGGGGAATACGTTGTGATACAAATCGATCAACTCTTTAG
GCACTTCGTCAGCAAGTTGATCAACAGCAGTACAGATAGAGCAGGCGTTT
TCATTGCGGATACCCCCCTCACATTGCAGCACAACCAAAATTACTTCAGT
ACAGTACCATATAGATCAAACATTATATAACTCTACACTGTCAACAACAT
ATAAATCAGAGGGGTTGGGTGTCAAAACATTGAGGCGATTACACGTACAA
GCGAAAGTATCTGGGTGAAATATGCTGCTCATTACGCTTGTAACAGAGTA
CTGTACCAAATTTCCGAATATCGGGGGCTATTATTCGATGCACAAACTGA
CCTGAATGATGGCTTGGTTCTCGGAGATACCCTTGGCCTGCAGATCAAAG
AAGAACATCAAGATCATCCGGGACAGGGCCTGTGTCAAGATCTCGCCGGT
CTTAGGCTTCAACTTCTCCAGTGACTGTTCCCTAAAGTCGATCTTCGCTT
GTGATTCTTTTTTCATCTGTGCACCCTGTGCCACCTTTTGAACTCTATCT
CGTTGCCGCTTCTCCTCCTCCTGCCGCTTTTCTGCAGCGCGTTCAGCAGC
TGACTCCTTTTTGGCAAACGCCACTTCAGCAGCACGGACAGCTTTCTCTC
TAGCTTGAACAGCCGCCATGTCCTGATGAAGTTGGGTTTTCAGTATCTCA
AGCTGCTCTTGTAGCTTGTAGAGACTCCTTGCTGTTGTGGCTGCTGCAGT
TTTTGCCCTTTTCGCCTCTTTTGTCGGCCTTCCAACAAGACCGCCGGTGG
GCATTCTTCTCCCTTCTTGGTCGGCATAAGCCAAACGAGGGGTGTCTATC
TTTACGTGCTCGTAACTCGACGAAGGCGGCAACTTTTTGTAAACAAAAAC
GTTTAATCGTCTCACAAGGTCATGGGGTTTCCAAATCAGCGGTTAAACAT
TTCGTATCGGGGATGTGTAACCAGATAAAATGATCCCCGTAGTTACAAAG
TATACAAAAAGGAGGCAATTTCATCGCGAGCTCCGCAGCGTTGTTGGGAG
TTTGCGGACGGGAGCATACGCTTGTTCGAAAGCCGGCATGATGTACTTTC
TCATGCTTTTTACGAGAGCGCAAACAAAGTCCATTTGCCCGAGATATTTG
CAGTTGACCCTATATTTGTTTTAGCACTCTGAGTAAAATGTGCAGATTAA
CGAAGAAAAAAAAAATGCCCCAAAAATTGCGGGGCATATATTTAGCTCCG
ATTAATACGTTCCACCGTAATAGCTGACATAATAGGTCCGGAATGGTTTT
CCAAATTTTCCACTTTGTGGAAAGTTTACTTTCCACAATGTGGAAACGTC
TATTTAAGGTCTAAAGCGGCCCATAGGGGAAATCCAATTAGGGTCAGAGA
GGGAACTGTACAAGTACATTAATCATTATGCAGTAGTAACAAAAGCAAGT
ATTTAGTCAAATTATGGGGGCTTGTCATTATGTGACGAATCGTTTCCAAA
TGAAGGAGGGCTCCACGAAGCCTTCGCGGAGCGTGTCTTCGAGAAGGCTT
CGCGGAGCCTCCAAGGCGCCACCACGAACCCTTCGCGGAGGTTTACGAAC
CCTTCGCGGAGGTCGCACATACCGAAGGCTCCACGAAGACGCCTTGGAGG
GTTCACGAGGCCTCCTCGAAGGGTCCGTGGATGAACTGCATGTTCCTACT
CGATCATGACTGTAATCGCGTTTGGTCAATATTATACTGTTTATAGAACA
GTAAACAGTAGTGCATTATTTGTAGTAGTTGTTGTTGTTGTTGATTCACA
CATTCAGCGTATTGTCCTTGCAACTGAAGAAACTACGGTGACACAACAAG
TCAGCCATAGACCTATCAAATGCCAATCCCGCTTGTGGTCACAAAGAGGT
ACGAAGGTCAACGGGTCACATCATGGTGACAACCCGCTACTCAGACCAAT
TCTCATCATATGGTCCTCTGCTGTGCTCATTTCAATGATTGTATTGGATT
TGTCTTTATTGTTTGATGATGTATTGGTTTGTCTTCCCTTTTGTTGGTGT
CCCTGCATGGCGATTGATGTAAGTGTACAGTATGACGGTGGGTTTCTCCC
CGACATTATACTGTTGACCCAATGTTATTACCATCGAGGAACCCGTTTAA
ATGCCATGAAGAGGTTTTGTATTTTCAGCTATTGATCCCACCTAAACTGT
TGAGTGGGGTCCTTTACCGTAAGGTTTCCCCACGGGTGTAATGGAAAATA
TCTGGGCTCTGGACGGGACTCACACGGGAGCGGTGGTGCTGTACTATGGG
TTTGCTGAGCAGGCTTGGCATGAACACATGTCTGACGAATATAAAGACCG
ATATATTATTAGAACATTGCTGATGACCCTTCCTTCGGTACTACAGACAA
TATAACACCACACAGTGAGTCCACATACCAGACATGATACCGAACACCTT
GGGTTCCAGATACCGGACTGGGCCAGGGGGTACTCTCGTCAAACACAACT
AAGGATCTACCAAAACACGCATCGTAGATCGACTACTGAAACTGCCATGA
ATCCTATTGGTCAGGCTTTCCCGGTAATCAATATGCATTTAGTAGTTACC
TCGATTACTTCGATCATAAACGTTTTGACATTTTTTCCCCCTGACTGGGG
GATGCTCAGAAGGTCTAGGTGCATTCAGATTTTTCTTTAAACAGGGATCC
AAATCGCGACAAAAAGTTATGCGGCTCTACAAGCAATGGCACCGACCAAT
ATCAAAACGGTTCATCAAACCTCCTTACTCCATATCGAGAGCAACCTCGA
TCGACTCGGAATGTTGTCGCCTACCCACGACCAGCGTTCTCAGCAAAAAA
ACGGGAAAATTACGCTCCAACCAGTTTTGATCAACAATTCCAAGTTGCTC
AAGGCCACACATTATACAGAAAAAAGAAAAATCGAAATACCGAGGTCCAT
GGTGGTGGAGGCCTTGAGCTGGTGAAGCCGGCGTGCGAGCCAGCATCCAG
CCGTCCAAAGCCCTGTGCATCCTTCAAAAAGCCCCACGAATCTTGCCCGT
TCGCCGCTCCTTGTGGCCCTCGTAGGAAGAAAAATGACCGTGGTCAGACA
TCAGCTTTTCCCTCAGAAACCTCCCGGTTCAAGCCTATGATTCTCTCGCA
CAGGGGTTCAGCCCTCCCCTGGCTCGTCGACGATCGAGCTGCCCTCCGCC
TTCGCCGAATCTGGTGCGTACCCACCCGATAGAGCACTACCAGGCTCTCC
GCGACATTGCTCCCTGCCTCTCGCGTGCCGCCACTTTCCCGAAGGGCACC
AAATTGGGTCTCAGAAGAGGCGCGCGCCTGGGAACACCATCATCCCCAGC
CAACCATACCGCCGCCGCGTCTCAACCGACAGGCTGAATCGCGGAGGCAG
CCAGTTGGCTGCATCTCTTGAGGGTGAGCCCGGCCCTACACCCGCCGGAA
AGACCCTCCCACACTCATACCCCGAAACCAGGCTTCGGAGGGAGAGGGCA
CGAGATACAGTAGTACTGTATTATGTGTATAATAGTGGAAGTCACTGGTA
TCTCCTACTGTAATACGAAGTACAACGAGTGCTGTTTCGAAGCCAAATAT
TTATCAAACAATCTGGTTGAGTAGCTGCAGTATGAGAACAACAGTACAGT
ATTTGGAAAGGGGCTAATAAGAGCCTTGACTCGATGTGATGATGATAACA
CTACACGGAGCATCCGTGGAGTGCCTGGCGTGCTTGAAATGTTATTATAC
TACGGAATATAAGTTGGATACCATACAACATCCTTGCATAATCGAAGACT
CGAATATCTACCAATAAACTTACCAAGATGGAATAAGACCCTCTGTTTTG
ACATGTTTTTCCCATAACCGGGGGATGCTCAGAAGGTCTAGGTGTGGTCT
GATTTTTCTTTAAAAAATACTCAGAGAGTCTAGGCGCGTTCTGATTTTTC
TTTAAATACGCTATTAAATCCCCAACTGGAATAATCAGCAAGGCGCCTAC
ACACTTCGGCCGAGCATGTTATACGCTGCGCCCGTGAATCCGCCTGCGCA
GTTGTGCGAACAATGGCAGCGGCAAAAAAACGCTTACAGAATCTATTATA
CAAACCCATAATTTTGAATTCGCCACCGCACAGCGCACAGACTCCGCTCC
TGGCGTTGAAACAAAACCGAACCAGAGACGCACACAAAATCAGCCCACAC
GGTACTATGACCAAGCGCCAGCTATGAACTGGGACCACGCGGTCAGCTGG
GGTAGGGGAGTTTGGGTTAGCGTTAGCGATACTGGTCGGGTTGGGTCGGG
TTGAATTCTGAACCGCACAGCGCACAGACTCTGCTCCTGGCGTTGAGACA
AAACCGAACCAGGGACGCACACAAGATCAGCCCACACGGTACTGCTACCA
AGCGCCAGCTATGAACTGAGACCACGCGGTCAGCTAGGGTAGGGGGGTTT
GGGGGGAGCGTTCGAATCCGAGGGTGTGTGATAATGTAGTTGATGGAGAG
TACGCCGTACGTTTAGATCTATCCTTCCGGATGATGGCGTTTTTCTACCT
CGTAAACACTTTATTTAATCAAACAATCAAACACTGTTATGATACCTATT
TAGAGACTGAAGGGTCTCGTCTCAGTGTTTTGTGGGTGGCCAAAACGATA
CCGATATCGATACGGTAGAGTCGTTACCCAATATGCGGGTACAGGTACTT
GTAAATCCGATGCGGTATGCTTCTCAATCCACAGAAAAAAAATGACAAAA
TATAAAGGAGGAAGTCATCGAGAGCGAGCACATTATTCATGATTCTACGC
GGGAGTTGGCACGGGATACACTCTTGTCTAGGCAGGGTCATACTCTTTTT
TTTGTATGATGTAGCCCCTCGTTTTTAGTCTTCAGACGTCTATTGACGTC
TCTTGTGTCTCCCCTGCACCCGACGCTGATAATGGTATGAACATTCTTCA
TAACATCTCTCCAAGACTCTTGTTCGTCCTTCCCTCTGGCGAGGGTGCAT
CAACGGCGTCTGGACCACTGGAGAAATTTTGCGACCGCGGGTTCAAAAAT
ATTGCAAATATATAATCGTTTAATTTCACCGCTCCCGTAAAGAAATGCAA
CGAACGCTGATTGAATCTTTCGTATAGTTTGGAAATGCGAGCTTTCAACT
ATTTGTGCACTTTCCAATCCATGATAATAATCGATCAGATATCATAGAGA
GCGCGAGTTTTATCGATCAAATAGACCGAGTATTTGTAATGTTCGCAGCC
GTTCATCACAATTCGATTAGTACTTACAGTATAAGAGGGAGTAAACGTTA
GGCTAGGGTGCAACCCGATGATGCGAAATCTTGTTTTCCCATGTCCGGGG
GTTAATCATCTACACTCAGATCAAGGGGATTTCCGCTTTCAAATGTTTTT
TTTCGAGGGCTCGGGTATATTTTCGGCTTCGAAAACACCACATTTCAAGT
CCAGGTCTCGTAAAAGTGCCAGAAAATGGCGGAACCGACATAATCGCAAA
CACCTTCGAAAAGTTGAATGGAGGGACTGCAAGGTTTCAAAGAGTGAAAA
TACCTCCACGATTGTTTTCTTCAACACGTCAGAACCTTGGCCAACCCTCA
GTTGGCCTATGAAACATATTAAGGGTCGAGGTAGTAGGCTATTGACGTCG
GTATGGAGATATTGGGAACGTTGCGCGCAAACTTTCGCAAATCAATGAAG
TTTCTGGTTGTAGAAGTACTTTCGGCGACCCGATTAGAGTCAAACATTTT
CATGTGGCGGAAAAAGCGGCTGCTCTTGTTAATGTACATGCCATTAAAGC
CACAACATGCTGGCTGCTTCCTGACGACCTGTTACACGACCACCGTTGAC
GTTCTTCTGTTGTACCGATTCAGGGGGAAGGTGTTTGAGAGGAGAAAACG
TGGGACCGTCCATCCCGATGATGAGCAGGCCAAGGCAAGGGGTAGAGCTT
CGACATGCGAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig9675:1046..9706- >mRNA_A-nodosum_M_contig9675.1.1 ID=mRNA_A-nodosum_M_contig9675.1.1|Name=mRNA_A-nodosum_M_contig9675.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=114bp|location=Sequence derived from alignment at A-nodosum_M_contig9675:1046..9706- (Ascophyllum nodosum dioecious)
CGCCGAGACCACAAATTAGCATTGCGCACGGCATTCGTAGCGTTACTCTT
GGTCACGACTAGCGTTGTCAGCGCCGCGGCAACGATCCAGCCGCCGGAGG
GGGAAGGTGTTTGA back to top
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