mRNA_A-nodosum_M_contig967.9.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: D7FTY8_ECTSI (Putative tyrosine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY8_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.880e-28 Identity = 86/219 (39.27%), Postives = 107/219 (48.86%), Query Frame = 2
Query: 53 KHAREGRDFTSTEALAAGSLDLAFEELELTNLIGGGTPRPGAGHPRGREDAHPGGSEGLLLFEPVRENGKQAATDTNTNPHHQLQVGESL-----------LWLMFVALSADRAPQNHVSNLDLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIFCADAFE*STPRPRGGRQHPVTRFKTPAGCWPWA 676
K A E + + E++A GSL L E+ N P+ + H E PG N QA + P QL++GE + +W P + DLD+E+AADFRAEVLMLAALRHPNVCLFM ACM PPNRAIVTEL++RGSLWEALR + +P S R G +R TP CWPW+
Sbjct: 789 KDAGENDESLAAESVAPGSLVL--EDSVTANAKPAEVPQASSAH---GEHVRPGRDL----------NSSQAFAASLDLPFDQLELGELIGGGGFGQVYQGVWRGTPVAIKVLLP---AAQRDLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSLWEALRADRVPEESIACSFRRGSD---RSGTAGTSSRVLTPQECWPWS 986
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A6H5KM77_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM77_9PHAE) HSP 1 Score: 120 bits (302), Expect = 8.940e-28 Identity = 60/97 (61.86%), Postives = 68/97 (70.10%), Query Frame = 2
Query: 386 DLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIFCADAFE*STPRPRGGRQHPVTRFKTPAGCWPWA 676
DLD+E+AADFRAEVLMLAALRHPNVCLFM ACM PPNRAIVTEL++RGSLWEALR + +P S G P +R TP CWPW+
Sbjct: 1045 DLDEELAADFRAEVLMLAALRHPNVCLFMGACMVPPNRAIVTELLTRGSLWEALRADRVPEESIACYFRRGSDRSCAAG---PSSRILTPQECWPWS 1138
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A835ZK37_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK37_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.790e-21 Identity = 76/209 (36.36%), Postives = 97/209 (46.41%), Query Frame = 2
Query: 65 EGRDFTSTEALAAGSLDLAFEELELTNLIGGGTPRPGAGHPRGREDAHPGGSEGL-----LLFEPVRENGKQAATDTNTNPHHQLQVGESLLWLMFVALSADRAPQNHVSNLDLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIF-CADAFE*STPRPRGGRQHPVTRFKTPAGCWPW 673
EG T+ A A G+ +L + ELE +IGGG G + G G +L +P + + AA + GE +V + R + +DD + ADF AEV MLAALRHPN+CLFM AC+ PP RAIVTELV+RGSLW+ALR+ P V CA A TP WPW
Sbjct: 470 EGASATAV-AHAVGAFELQYAELEFGRMIGGG----------GFGQVYRGSWRGTPVAIKVLIQPAQVRARGAAIN-----------GE--FECAYVCVERLRCEE-------MDDALVADFAAEVAMLAALRHPNICLFMGACLRPPRRAIVTELVARGSLWDALRDRAPPRVPHGCAGA-----------------GVATPPEAWPW 630
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A7S1DAG8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAG8_CYCTE) HSP 1 Score: 83.2 bits (204), Expect = 1.090e-15 Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 2
Query: 410 DFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIFCADAFE*STPRPRG---GRQHPVTRFKTPAGCWPW 673
+F AE+ ML +RHPN+CL+M AC+ PPNRAIVTEL + GSLW+ALR LP A+ + STP P+ G T P G WPW
Sbjct: 1 EFAAEINMLKGMRHPNICLYMGACVDPPNRAIVTELAANGSLWDALR---LPLKQPYAE-LDGSTPWPKELYKGAGATRTTHVPPKGTWPW 87
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: K0TI28_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TI28_THAOC) HSP 1 Score: 83.2 bits (204), Expect = 9.220e-15 Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 401 IAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIFCADA----------FE*STPRP--RGGRQH---PVTRFKTPAGCWPWA 676
+ +F AE+ +++ +RHPN+CLFM AC+TPPNRAIVTEL GSLW+ALR+ L S AD +E + P P G+ P PAG WPWA
Sbjct: 699 VLEEFIAEINIISGMRHPNICLFMGACLTPPNRAIVTELCENGSLWDALRSP-LGSSYCVADGHSRSAWPLELYELAPPPPLYHNGQVSFSVPSEPPMPPAGAWPWA 804
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A7S2UPN0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPN0_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 9.470e-14 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query: 386 DLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLP 565
++ + +F AE+ ML+ +RHPN+CL++ ACM PPNRAIVTEL S GSLW+ALR P
Sbjct: 109 NVSKSVLEEFVAEINMLSGMRHPNICLYIGACMKPPNRAIVTELASHGSLWDALRQPLSP 168
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A1E7FA88_9STRA (Flag-tagged protein kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA88_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.530e-13 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 2
Query: 380 NLDLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSV-IFCADA 589
N + ++ +F+AE+ +L +RHPN+CL+M AC+TPPNRAI+TEL + GS W++LR +P + C A
Sbjct: 53 NAHIPKAVSEEFKAEINLLKGMRHPNICLYMGACLTPPNRAIITELAANGSAWDSLRLPLMPPYRVSCGAA 123
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A6S8IK00_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IK00_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.530e-13 Identity = 41/100 (41.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 401 IAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIFC------ADAFE*STPRPRGGRQHPVTRFKT---PAGCWPW 673
I +F AE+ +L +RHPN+CL+M AC+ PPNRAI+TEL + GSLW+ALR C A P PR G ++R + P WPW
Sbjct: 688 ILEEFAAEINLLKGMRHPNICLYMGACLAPPNRAIITELAANGSLWDALRLPLSAPYTACDGLTRHAWPMSLYQPDPRHGVPPSMSRTVSHVPPKSTWPW 787
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A448ZCV3_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCV3_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.640e-13 Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 2
Query: 380 NLDLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLP 565
N + I +F+AE+ +L +RHPN+CL+M ACMTPPNRAI+TEL + GS+W++LR +P
Sbjct: 854 NTHIAKAILEEFKAEINLLKGMRHPNICLYMGACMTPPNRAIITELAANGSVWDSLRLPLMP 915
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Match: A0A7S0UFT7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFT7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.150e-13 Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 2
Query: 380 NLDLDDEIAADFRAEVLMLAALRHPNVCLFMAACMTPPNRAIVTELVSRGSLWEALRNEHLPSVIFCADAFE*STPRPRGGRQHPVTRFKTPAGCWP 670
N + I +F+AE+ +L +RHPN+CL+M AC+TPPNRAI+TEL + GS W++LR P AD TP GCWP
Sbjct: 414 NSHIAKPILEEFKAEINLLKGMRHPNICLYMGACLTPPNRAIITELAANGSAWDSLRLPLSPPYR-AADG--------------------TPRGCWP 489 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig967.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig967.9.1 >prot_A-nodosum_M_contig967.9.1 ID=prot_A-nodosum_M_contig967.9.1|Name=mRNA_A-nodosum_M_contig967.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=89bp MFVALSADRAPQNHVSNLDLDDEIAADFRAEVLMLAALRHPNVCLFMAACback to top mRNA from alignment at A-nodosum_M_contig967:22396..29471- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig967.9.1 ID=mRNA_A-nodosum_M_contig967.9.1|Name=mRNA_A-nodosum_M_contig967.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7076bp|location=Sequence derived from alignment at A-nodosum_M_contig967:22396..29471- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig967:22396..29471- >mRNA_A-nodosum_M_contig967.9.1 ID=mRNA_A-nodosum_M_contig967.9.1|Name=mRNA_A-nodosum_M_contig967.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=267bp|location=Sequence derived from alignment at A-nodosum_M_contig967:22396..29471- (Ascophyllum nodosum dioecious)back to top |