mRNA_A-nodosum_M_contig9638.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 1.460e-19 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 3
Query: 3 AEYHDLYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSKGSGYEVPSGNFPDAELPEICANG 194
A YHD+YW GDG Q DP +HGQ T L G+V+RIS P+ G+GYE+P+GN LPEICA+G
Sbjct: 251 ASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASPALPEICASG 314
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 3.540e-16 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 3
Query: 15 DLYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSKGSGYEVPSGNFPDAELPEICANG 194
DLYW GDGGPQ DP +H Q T + G ++RI+ PS G GY +PSGN+ L EICA G
Sbjct: 318 DLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGGGALDEICAIG 377
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 4.630e-16 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3
Query: 3 AEYHDLYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSKGSGYEVPSGNFPDAELPEICANG 194
A DLYW GDGGPQ D N+H Q T + G ++RI+ PS GSGY +PSGN+ L EICA G
Sbjct: 251 ASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGGGALDEICAIG 314
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.690e-15 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query: 9 YHDLYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSKGSGYEVPSGNFPDAELPEICANG 194
Y DLYW GDGGPQ DP +H Q + G ++RIS P+ G+GY +PSGN+P A+ E+CA G
Sbjct: 270 YSDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPSGNYPGAKA-EVCAIG 330
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.100e-14 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query: 9 YHDLYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSK--GSGYEVPSGNFPDA---ELPEICANG 194
YHD+YW +GDGGPQ DP++ Q L G++VRIS PS G+GYE+P+GN D E PEICA G
Sbjct: 321 YHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWG 387
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 2.940e-9 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 3
Query: 12 HDLYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSK-GSGYEVPSGN--FPDAELPEICANG 194
H+L+WA+GD GPQ D D GQ ++L G+++RI S+ SGY +PSGN EICA G
Sbjct: 307 HELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGVSSEMESGYSIPSGNPFSGGGGRGEICAQG 370
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: A0A850G5C2_9DELT (PQQ-dependent sugar dehydrogenase n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850G5C2_9DELT) HSP 1 Score: 53.1 bits (126), Expect = 1.500e-6 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 3
Query: 18 LYWALGDGGPQEDPNDHGQRTDVLFGTVVRIS-APSKGSGYEVPSGN--FPDAE-LPEICANG 194
LY+++GDGG Q DPN+ Q FG ++R+ PS GY +P+ N DA+ LPEI A G
Sbjct: 234 LYFSIGDGGDQGDPNNRAQDLSTYFGKIMRVDITPSGDEGYSIPADNPFVDDADVLPEIWAYG 296
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: A0A2F0ALB3_9DELT (Cytochrome c domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2F0ALB3_9DELT) HSP 1 Score: 52.4 bits (124), Expect = 2.850e-6 Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 3
Query: 18 LYWALGDGGPQEDPNDHGQRTDVLFGTVVRISA-PSKGSGYEVPSGN-FPDAE-LPEICANG 194
LY +LGDGG DP HGQ TD L G+++RI PS+G Y +P+ N F D PEI G
Sbjct: 235 LYISLGDGGAAGDPLGHGQNTDSLLGSILRIDVTPSQGRPYTIPTNNPFSDGGGRPEIWTWG 296
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: A0A0C1ZMS2_9DELT (GSDH domain-containing protein n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C1ZMS2_9DELT) HSP 1 Score: 52.0 bits (123), Expect = 3.890e-6 Identity = 28/61 (45.90%), Postives = 34/61 (55.74%), Query Frame = 3
Query: 18 LYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSKGSGYEVPSGN--FPDAELPEICANG 194
LY GDGG +EDPN HGQ TD L G+++RI S Y +P+ N PEI A G
Sbjct: 162 LYIGFGDGGSKEDPNGHGQNTDTLLGSMLRIDVDG-ASPYAIPADNPFAAGGGAPEIFAWG 221
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Match: UPI00190CDE7F (PQQ-dependent sugar dehydrogenase n=1 Tax=Luteolibacter yonseiensis TaxID=1144680 RepID=UPI00190CDE7F) HSP 1 Score: 51.6 bits (122), Expect = 5.340e-6 Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 3
Query: 18 LYWALGDGGPQEDPNDHGQRTDVLFGTVVRISAPSKGSG--YEVPSGN-FPDAE--LPEICANG 194
LY+ +GD GPQ+DP HGQ +L G ++RI + +G Y +P N F D E PEI A+G
Sbjct: 343 LYFGMGDTGPQDDPQGHGQDMSLLLGKMMRIDIDHQDTGLPYAIPRDNPFRDVEGVRPEIWASG 406 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9638.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9638.3.1 >prot_A-nodosum_M_contig9638.3.1 ID=prot_A-nodosum_M_contig9638.3.1|Name=mRNA_A-nodosum_M_contig9638.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=61bp MTCTGLWETGVRKRTRMTTASARMSSLGPWYEFLHPRRARATKYQVATSRback to top mRNA from alignment at A-nodosum_M_contig9638:7340..8044+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9638.3.1 ID=mRNA_A-nodosum_M_contig9638.3.1|Name=mRNA_A-nodosum_M_contig9638.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=705bp|location=Sequence derived from alignment at A-nodosum_M_contig9638:7340..8044+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9638:7340..8044+ >mRNA_A-nodosum_M_contig9638.3.1 ID=mRNA_A-nodosum_M_contig9638.3.1|Name=mRNA_A-nodosum_M_contig9638.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=183bp|location=Sequence derived from alignment at A-nodosum_M_contig9638:7340..8044+ (Ascophyllum nodosum dioecious)back to top |