mRNA_A-nodosum_M_contig963.23.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 3.300e-133 Identity = 290/794 (36.52%), Postives = 420/794 (52.90%), Query Frame = 2
Query: 287 VPDEVASAIDSFVVPEGYVAEGSRSQSMVYCWGVYLVPAKGHDDPDADARFYCMASEDCRSKECCIPCKNRHRGNVHKHLKKHHHLCGSRSMAHARKNERAGKSPKKAATVGRVSSDGVGLVRATEVQFVRLLVQKLLPFDF-AEASEFRAFLKLITKNSA-PKIAIQRVKHIILEMYSATKEVVVEGLKEEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRA-RNFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLKP-DDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAE--FLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQASGDPVVSPRVANMGAVDVLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQESRALRELKVPAAKRLKTNRGSRSPKASPPPAGVEESWEMFG-SEGTAQDEKHEDGDAVKKIVDEEIARFKALKMQPRELAPKEACRYWDRSGKRAFPLLQPVAQQVLGNQASVVRIERDFSGADALLSGRTTRKDGYYVEMVLFLNVNFDKIPR--DVQAITRSAIKEHWPKRFTSQDRELKEAEDFLEPGR 2641
VP +I+SF + Y EG+R S +Y G Y P + +Y CR+ PC + NV+KH ++ H L G++ R A +G + GVG R E+Q +L+V+K+LPF F + F+ + T S+ P + +RVKH+I E+Y ATK+VVV + +E+ A LPILH + D WT K SGRKFLG+HVF+VD F L+DA+L++K Y+ S + SD+L+ I K+ + EFGL + AS TTD VKA+ T+ + + W WC H+ KA + ++G +DP S N QARDI++ V+KV E LN SP ++ KF Q + L K AP RW+S+ T R I W+ L++LY G FPLE + L+L SLL+P++SI RD Q D PM + + L L ++ LKV++V P + G P + + V PE L R + A S FYGRVW+ DP F AA +LTPP+ G+H+ + L GDD+ LP +++ PT ++V ++ TW+ I ERAV+AV+K+++ A AA K R + P G E + FG S G ++ K GDAV++ V EI R+K + M +L P E YW +G+ +FP L+ VAQQ G+Q S +ERDFSG L +R + Y+VEMV+FLN NF IP+ ++ +I I++ P +F D +L AE L+P R
Sbjct: 62 VPQVTIDSIESFKAKDEYQREGAREDSFLYSLGNYAAPV---EKSGKWIGYYKCQVGKCRTSTKTTPCPKGSKSNVNKHFREVHQLVGAKGAV--RMENAQNHQGNIRAAMGASKTFGVGGKRVKELQAAKLVVEKMLPFSFFSSGGTFKEMMATATGTSSYPTLPPRRVKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQV----PPIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAA--SSGPGAAGVFKRARTAGXXXRRRPVDGDE--FAAFGRSVGGVEESKQ--GDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLR 840
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 334 bits (856), Expect = 1.700e-95 Identity = 212/616 (34.42%), Postives = 321/616 (52.11%), Query Frame = 2
Query: 266 SDGTTVDVPDEVASAIDSFVVPEGYVAEGSRSQSMVYCWGVYLVPAKGHDDPDADARFYCMASEDCRSKECCIPCKNRHRGNVHKHLKKHHHLCGSRSMAHARKNERAGKSPKKAATVGRVSSDGVGLVRATEVQFVRLLVQKLLPFDFAEASEFRAFLKLITKNSAPKIAIQRVKHIILEMYSATKEVVVEGLKEEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTS--RARNFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLK-PDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLES--KQAEFLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQASGDPVVSPRVANMGAVD-----VLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQESRA 2083
+DG +V V +A+D+F VP G+V +GSR S +Y GVY+ + ++C+AS CRS + IPC R NV+ HLK+ H + G+ + ++N + + + ++ G+G R ++ L A AS KH+++EMY ATK+ VV + EI A LPI+H+ D W CK++G K++ +HV +V+ L+ +LAVK Y+ +GK S++L+++F + + EFG+ ++D A TTD VKAMC + A++ G +WDWCV H+A +A + +FG S DP N+ AR +V+ VIK A K+N SP ++ KF AQ + LK AP RW+S+ RII W+ L+++Y + G FPL+ + L+L SLL P+A+I RD Q PMS +M +A A+LK+ L T PLKV+ + +P S A P N G V P L V R+ L A Y R+W+ DPS F++A+V+LTP Y L+ L GD + L + + PT DV+S+ ++W I +RA A RK+ S+A
Sbjct: 68 NDGKVAEVDAAVPTAVDNFSVPAGFVRKGSRVDSFMYSLGVYV-----EKSGSTNHTYFCLASSKCRSNKKIIPCPKGDRSNVNTHLKRQHKMQGTEGVK--KRNTKKETQTSIQSALAASTNSGLGKNRCASRSPPTHRTRRFL----ASAS----------------------KHLLVEMYVATKKAVVGNMLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKG-SWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKKPLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHALTAGDAQHLGEGRAHLAPTLDDDVQSKLDASWADIRKRASDAARKEHSKA 649
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 319 bits (817), Expect = 7.340e-92 Identity = 203/590 (34.41%), Postives = 317/590 (53.73%), Query Frame = 2
Query: 851 EEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRAR-NFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLK-PDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAE--FLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQASGDPVVSPRVANMGAVDVLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQESRALRELKVPAA---KRLKTNRGSRSPKASPPPAGVEESWEMFGSEGTAQDEKHE-DGDAVKKIVDEEIARFKALKMQPRELAPKEACRYWDRSGKRAFPLLQPVAQQVLGNQASVVRIERDFSGADALLSGRTTRKDGYYVEMVLFLNVNFDKIP--RDVQAITRSAIKEHWPKRFT 2590
EE+ +A LPILH D W K SGRKFLG+HVF+V F L+ +L++K Y D+ K +++L I +A + EFG +D AS TTD VK++ + +G+ W+WC H+ KA +D+FG DP S N +A ++++ +I + L+ S KF Q + L LK P+ AP RW+++ T R+I W+ L++LY AG+ F LE + +L SLL+ ++S+ RD Q PM + + LK L + LKV+ + P + G P + + V + L V + ARD L A S FYG VW+ +C DPS+F DAA +LTPP+ G +L+ + L +D L ++ + PT +DV + W I +RAV AV+ +++R E + KR +T+ S + + E+ + MFG A + D D V++ V EI R+K + M+P +L P + YW++ GK+ FP L+ VAQQ G+QAS +IERDFS +G +R + Y++EMV+ L N++ IP +D+ +I I++ P +++
Sbjct: 3 EEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDI----PPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAVPSRRKN-----YEDDFSMFGCNEVAPSQSDGGDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYS 583
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 292 bits (747), Expect = 4.200e-82 Identity = 200/550 (36.36%), Postives = 286/550 (52.00%), Query Frame = 2
Query: 992 VKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTS-RARNFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLKPD-DAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAEFLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQAS-GDPVVSPRVANMGAVDVLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQES-RALRELKVPAAKRLKTNRGSRSPK-ASPPPAGVEESWEMFGSEGTAQDEKHEDGDAVKKIVDEEIARFKALKMQPRELAPKEACRYWDRSGKRAFPLLQPVAQQVLGNQASVVRIERDFSGADALLSGRTTRKDGYYVEMVLFLNVNFDKIP--RDVQAITRSAIKEHWPKRFTSQDRELKEAE 2620
VK Y+ S K S +L+++F++ +AEFG+ ++D A TTD +KAMCT+ + WDWCV H+A +A + +FG S DP S N+ AR +V +IK A K+N SP ++ KF AQ E L LK AP RW+S+ RII W+ L++L+ SLL+P+A I RD Q PM+ +M +A A+LK+ L PLKV+ + +P S +A D V + ++ V P L V R+ L Y RVW+ DPS F++A+V+LTP Y L L D + L + + + PT +V+ + W I RA +A RK+ S RA E P KRL T P+ AS V E G EG ++D+ + + V +E+ RF+AL M EL +E +W +G++ FP L PVAQQVLGNQA ++ERDFS LL+ +R D Y+VEMV+FL+VN+ +IP +D+ I I+ P RF D +L AE
Sbjct: 82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRKLF--------------------SLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKHSARATAEGGQPPLKRLSTPATKARPRFASLARNRVRGDTEDVG-EGDSEDK------VLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDADLAAAE 604
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 275 bits (702), Expect = 1.290e-77 Identity = 175/470 (37.23%), Postives = 248/470 (52.77%), Query Frame = 2
Query: 236 DKPNATSYAV--SDGTTVDVPDEVASAIDSFVVPEGYVAEGSRSQSMVYCWGVYLVPAKGHDDPDADARFYCMASEDCRSKECCIPCKNRHRGNVHKHLKKHHHLCGSRSMAHARKNERAGKSPKKAATVGRVSSDGVGLVRATEVQFVRLLVQKLLPFDFAEASEFRAFLKLITKNSAPKIAIQRVKHIILEMYSATKEVVVEGLKEEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRARNFG-ITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLK-PDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLE--SKQAEFLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLK 1627
D P T+ AV DG V V A+D F VPEGYV +GSR +S +Y GVY+ KG +FYC+ CR K IPCK R NV+ HLK H L G + K + A ++ AA + + GVG +L + S+ VV ++EEI A LPI+H+ D WTCKVSGRK+LG+HVF+VD FSLR A+++VK Y+ + + K S++L++IF+A +AE+G+ ++D A TTD VKAMC + I WDWC H+A K+ +++FG S DP S N+ ARD+++ VIK A K+N S + KF E L LK AP RW+S+ RII W+ L+++Y + GE FPL+ + + + L+L SLL+P+++I RD Q + PM+ +M LA A+LK
Sbjct: 59 DVPVITAAAVYNKDGEPHAVNTAVVKAVDDFKVPEGYVRKGSREKSYMYSLGVYIEALKGDKH-----QFYCLVDGTCRRKNKMIPCKGGDRSNVNSHLKNAHGLQGVGGVVKEGKKKAAKENI--AANLAAKENSGVG-------------TDRLRGYPLDHRSD-----------------------------------VVGNMQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLK 473
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 239 bits (609), Expect = 4.350e-65 Identity = 165/483 (34.16%), Postives = 253/483 (52.38%), Query Frame = 2
Query: 851 EEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRAR-NFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLK-PDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAE--FLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQASGDPVVSPRVANMGAVDVLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQESRALRE---LKVPAAKRLKTNRGSRSPKASPPPAGVEESWEMFGSEGTAQDEKHE-DGDAVKKIVDEEIAR 2275
EE+ +A LPILH D W K SGRKFLG+HVF+V F L+ +L+ D+ K +++L I +A + EFGL +D AS TTD VK++ + +G+ W+WC H+ KA +D+FG DP S N +AR++++ +I + L+ S KF Q + L L P+ AP RW+++ T R+I W +++LY AG+ FPLE + +L SLL+P++S+ RD Q PM + + LK L + LKV+ + P + G P + + V + L V + AR+ L A S FYGRVW+ +C DPS+F DAA +LTPP+ G +L+ + L +D+ L ++ + PT +DV + W I++RAV AV+ +RA E + KR +T+ + S + + E+ + MFG A + E D D V++ V EI R
Sbjct: 3 EEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLT-AKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDI----PPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWVEINKRAVTAVKTAHNRAAGEGGGQGLDPFKRARTSGAAPSRRKN-----HEDDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR 467
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.750e-56 Identity = 185/683 (27.09%), Postives = 287/683 (42.02%), Query Frame = 2
Query: 851 EEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFV---------------------------------------------------------------------------------------------------------------------------------VKAMCTSRAR-NFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLK-PDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAE--FLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQASGDPVVSPRVANMGAVDVLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQESRALRELKVPAA---KRLKTNRGSRSPKASPPPAGVEESWEMFGSEGTAQDEKHE-DGDAVKKIVDEEIARFKALKMQPRELAPKEACRYWDRSGKRAFPLLQPVAQQVLGNQASVVRIERDFSGADALLSGRTTRKDGYYV 2488
EE+ +A LPILH D W K SGRKFLG+HVF+V F L+ +L+ D+ K +++L I +A + EFGL +D AS TTD + VK++ + +G+ W+WC H+ KA +D+FG DP S N +AR++++ +I + L+ S KF Q + L L P+ AP RW+++ T R+I W +++LY AG+ FPLE + +L SLL+P++S+ RD Q PM + + LK L + LKV+ + P + G P + + V + L V + AR+ L A S FYGRVW+ +C DPS+F DAA +LTPP+ G + + + L +D+ L ++ + PT +DV + W I +RA+ AV+ ++RA E + KR +T+ + S + + E + MFG A + E D D V++ V EI R + YW++ G++ P L+ VAQQ G+QAS +IERDFS +G +R + Y++
Sbjct: 3 EEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEAKAAEVLVEILEAILHEFGLRPSDLASGTTDKRYRPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLT-AKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDI----PPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGAAPSRRKN-----YENDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR--------------DVLTYWNKVGEQMLPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWL 653
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.100e-54 Identity = 118/327 (36.09%), Postives = 185/327 (56.57%), Query Frame = 2
Query: 665 VQFVRLLVQKLLPFDFAEASE-FRAFLKLITKNSA-PKIAIQRVKHIILEMYSATKEVVVEGLKEEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRAR-NFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLK-PDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAE--FLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLK 1627
V + +V+K+LPF F + E FR + N++ P++ +RVKH+++E+Y +TK+ V+ + E+ A LPILH D WT K SGRKFLG+H+F+V F L+ A++ S K +++L I ++ + EFGL +D AS TTD VK++ + +G+ W+WC H+ KA +D+FG DP S N + R +++ VI + L+ SP KF Q + L LK P+ AP RW+++ T R+I W+ L++L+ AG+ FPLE + L+L SLL+P++S+ RD Q PM + + LK
Sbjct: 109 VPAAKQVVEKMLPFHFYSSGEMFREMMATHGGNTSYPELPPKRVKHLLVELYCSTKKAVLGDMLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALI-------------SAKAAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGVPMMADIYMKFGMLK 422
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE) HSP 1 Score: 197 bits (500), Expect = 5.140e-52 Identity = 124/340 (36.47%), Postives = 175/340 (51.47%), Query Frame = 2
Query: 662 EVQFVRLLVQKLLPFDF-AEASEFRAFLKLITKNSAPKIAIQRVKHIILEMYSATKEVVVEGLKEEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPYSFGMDSG--TSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRAR-NFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALKTCLKPDDAPLRWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAEFLELSSLLEPVASIMRDVQNSDHPMSGQMQLALAKLKRTTLCRTRPLKVYK 1669
E+ +RLLV+KLLP F + E R L LI + P + +RVKH++ E+Y ATK+VVV + EE+ A LP+LH D WT K SGRKFLG+H+++V F ++ A+L V + D G + + S++L I K+ + E GL+ +D AS TTD VKA+ + ++G+ W+WC HM KA + +FG DP S N ARD+++ VIKV E LN S R KF QTE L GE + + + L+L SLLEP+ I RD Q PM + + + LK L + LKVY+
Sbjct: 37 ELLAMRLLVEKLLPVSFFSSGDELRTLLALIGDSDFPPLRPRRVKHLLTELYVATKKVVVGNMLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDLQTELL-------------------------------------GE----DDNKNDVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGVLNLEKELKVYE 335
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE) HSP 1 Score: 174 bits (441), Expect = 6.360e-41 Identity = 207/783 (26.44%), Postives = 333/783 (42.53%), Query Frame = 2
Query: 281 VDVPDEVASAIDSFVVPE----GYVAEGSRSQSMVYCWGVYLVPAKGHDDPDADARFYCMASEDCRSKECCIPCKNRHRGNVHKHLKKHHHLCGSRSMAHARKNERAGKSPKKAATVGRVSSDGVGLVRATEVQFVR-LLVQKLLPFDFAEASEFRAFLKLITKNSAPKIAIQR-----VKHIILEMYSATKEVVVEGLKEEIAHALLPILHFSFDTWTCKVSGRKFLGIHVFWVDRKFSLRDAVLAVKPY----SFGMDSGTSGKPSDMLWSIFKAAIAEFGLNVNDFASCTTDDSFVVKAMCTSRARNFGITWDWCVSHMAGKACDDSFGNSVDPDSSNNQQARDIVEAVIKVAEKLNNSPAWRGKFGLAQTEALK---TCLKPDDAPL-RWVSMADTCMRIIDHWYALQQLYVSAGEVFPLESKQAEFLELSSLLEPVASIMRDVQNS-DHPMSGQMQLALAKLKRTTLCRTRPLKVYKVLHSPPSVQASGDPVVSPRVANMGAVDVLPENLTLVGRAARDSLNAAFNSGFYGRVWNSACEDPSVFKDAAVMLTPPYVHGVHLNFLMLVEGDDKPLPRSNSFIVPTRPQDVESRRASTWQAIHERAVQAVRKQESRALRELKVPAAKRLKTNRGSRSPKASPPPAGVEESWEMFGSEGTAQDEKHEDGDAVKKIVDEE---IARFKALKMQPRELAPKEACRYWDRSGKRAFPL-LQPVAQQVLGNQASVVRIERDFSGADALLSGRTTRKDGYYVEMVLFLNVNFDKIPRDVQAITRSA 2560
+DVP+ V +AI S+ P + G ++S+ +GV L + C+AS CR++ + + HLK H + G+ S A K +R + K+ V D R +QF + ++ F A+ R L + + AI +K +I+EMY+AT L +++ AL+PIL+ + D WT +VSG K++G+ V +++ ++ +L VK + GMD G + W+ + + GL +FA +D V T A+ F +WC+ HM + D G S P SS N RD++E + K+ + N S + E + K A + RWVS A RI++ + A+Q+ +V G+VFPL + + E E+ S+L V ++ Q + + M G ++ + +L +TL ++PL+V+ V +A G P D E+LT GR R+ A F R +S + D A +L P + ++ L+ S S D++ R + E+AV R +E VP + T SR+ A+ A + ++ SEG E+ E ++ +EE I + + P + K+A YW ++ PL L+ VAQ VLG AS +ERDFS AD + + D Y EM LFL +D IP DV A
Sbjct: 1 MDVPEAVKTAISSYQPPPLREIVSLESGKTTRSITAFYGVKLEILPRVHGSHRPMEWACLASVQCRNERKRLKIFSDATTGATSHLKDKHGIVGAASAKTA-KRKRDQSASKEVTLESAVYKDDPS--RYNCLQFTKAFIIHAGCAFSLADHDRVRRCLATMCPDHLDVAAINARGATCIKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNA--QVLGQHGLRNENFAGAVSDSGSDVS---TGIAKAFRR--EWCIPHMINRVTIDGTGMSNSPASSKNHLCRDLLEKMKKIIQHFNRSSGDKILLDDELEELSEGNWNHAKLAQAVVQRWVSTAKMMFRILEQFTAIQKCFVEKGKVFPLANYKTEIEEVYSILRAVKTVTEYCQKTYEATMEGGLRQTV-QLLISTLEPSKPLRVHHV-------EAIGADAPDPP-----HTDRPHEDLTETGRTTREVFATALAKRFLPRYKSSELNRRTHLFDHAPLLNP---RTRKMRYIELLLKSTAATSYSGSCGTLATFTDIKERIQEEVLELLEQAVVEHRAREP-------VPTSDEEVTGPRSRTVPAATRAADDDVGFD--DSEG----EEEESSSLYERSPEEEAKSILKEWLNLLIPSDKRGKDAADYWSTPHGKSQPLPLRAVAQGVLGCPASTGAMERDFSIADMFMPRKRASVDPAYFEMSLFLRAQYDFIPDDVPKFANEA 744 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig963.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig963.23.1 >prot_A-nodosum_M_contig963.23.1 ID=prot_A-nodosum_M_contig963.23.1|Name=mRNA_A-nodosum_M_contig963.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=853bp MMSNANGSGSGLATKKHGQPEPEQAARRDQDSEDDLDEDKPNATSYAVSDback to top mRNA from alignment at A-nodosum_M_contig963:277858..284776- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig963.23.1 ID=mRNA_A-nodosum_M_contig963.23.1|Name=mRNA_A-nodosum_M_contig963.23.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6919bp|location=Sequence derived from alignment at A-nodosum_M_contig963:277858..284776- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig963:277858..284776- >mRNA_A-nodosum_M_contig963.23.1 ID=mRNA_A-nodosum_M_contig963.23.1|Name=mRNA_A-nodosum_M_contig963.23.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2559bp|location=Sequence derived from alignment at A-nodosum_M_contig963:277858..284776- (Ascophyllum nodosum dioecious)back to top |