mRNA_A-nodosum_M_contig9615.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.470e-43 Identity = 79/136 (58.09%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRKYFASLF 408
+D AFTRMF + P +P +TY LFT+RD TV ASFN+P P S++LQ + GMS+ AD TAQ+ACPA+VQ LSTPL+L+G+DLYNNP ST R F+ +Y S++ R+ R GPAFGIGGVGNTAFRK + F
Sbjct: 143 KDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG) HSP 1 Score: 147 bits (372), Expect = 1.140e-38 Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRKY 393
+D FTRMF R +P TY+ F RD MTVAASFN P+ + +LQE + M ++N+ VTAQLACPA +Q +STP++LLG+DLYN PN+T R I +EY + + RV R GPAFGIGGVGNT FR +
Sbjct: 124 KDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 138 bits (348), Expect = 1.860e-35 Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRK 390
+D AFTRMF TV P +Y LF RD +TVAASFN P S YLQ+ ++ AD+ AQL CPA VQ +STPL+LLG+DLYN N + RA I REY + + R++R GPAFGIGGVGNT R
Sbjct: 91 KDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS) HSP 1 Score: 138 bits (348), Expect = 6.410e-35 Identity = 71/132 (53.79%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQ-ERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRKY 393
+D AFTRMF TV +P+P +Y+LF RD +T+ +SFN P SKY+Q E S K +D AQLACPA +Q +STPL+LLG+DLYNN NS+ R I REY +++ RV+R PAFGIGGVGN R Y
Sbjct: 140 KDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTEGILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.180e-34 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRKYF 396
+D AF RMF + P P A+ LF VRD MT AASFN P +K +++ M + NA AQL CPA+VQ +STPL+LLG+DLYNN TM A + REY +++ RV R GPAFG+GGVGN FR F
Sbjct: 127 KDRAFARMFGVIAPAAFPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLMDKSNAGTFAQLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRNIF 258
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.610e-34 Identity = 69/136 (50.74%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRKYFASLF 408
+D AF RMF + P P A+ LF VRD +TVAASFN P +K L++ M A AQL CPA+VQ +STPL+LLG+DLYNN + RA F+ REY ++ R+ R GPAFGIGGVGNT FR + F
Sbjct: 126 KDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 137 bits (345), Expect = 3.990e-34 Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGM--SEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFR 387
+D AFTRMF RP+P ATY LF RD +TVAASFN P S L R+G +++ADV AQLACPA+VQ LSTP++LLG+DLYN P + R + REY + + R++R GPAFGIGG+GN FR
Sbjct: 151 KDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLL-RYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A8H7PPD2_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PPD2_9FUNG) HSP 1 Score: 136 bits (342), Expect = 4.690e-34 Identity = 70/132 (53.03%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQ-ERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRKY 393
+D AFTRMF TV +P+P +Y+LF RD +T+AASFN P S+++Q E S K +D +Q+ACPA +Q+LSTPL+LLG+DLYNN +ST R I REY +++ RV R PAFGIGGVGN R Y
Sbjct: 139 KDRAFTRMFGTVATKPLPALSYLLFAARDSLTIAASFNAPPIVSQWIQTEGILNSTKASDTLSQIACPALMQVLSTPLHLLGLDLYNNSSSTTGQRFSLIRREYVKSVLARVGRIAPAFGIGGVGNNYVRSY 270
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: A0A0L0FIC5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIC5_9EUKA) HSP 1 Score: 135 bits (339), Expect = 1.000e-33 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRK 390
+D AFTRMF T+ P +P +Y LF VRD T+ ASF++P + ++ + +G K A AQL CP +VQL+STP++LLG+DLYNN +T RA F+ REY + R+SR PAFGIGG+ N FR+
Sbjct: 132 KDRAFTRMFGTIAPTSLPIGSYGLFAVRDMATIGASFSLPVKVADHMHDEYGYDRKRALFAAQLLCPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRE 261
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 134 bits (338), Expect = 1.270e-33 Identity = 67/130 (51.54%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 1 QDLAFTRMFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNADVTAQLACPASVQLLSTPLNLLGMDLYNNPNSTMMARAKFIAREYNSAMVLRVSRTGPAFGIGGVGNTAFRK 390
+D AF RMF + P P + LF VRD MT ASFN P +K +++ M + NA AQL CPA+VQ LSTPL+L+G+DLYNN M R F+ REY ++ RV R GPAFGIGGVGNT FR
Sbjct: 128 KDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRN 257 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9615.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9615.1.1 >prot_A-nodosum_M_contig9615.1.1 ID=prot_A-nodosum_M_contig9615.1.1|Name=mRNA_A-nodosum_M_contig9615.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=132bp MFATVKPRPMPFATYVLFTVRDGMTVAASFNMPSPASKYLQERFGMSEKNback to top mRNA from alignment at A-nodosum_M_contig9615:13218..14703- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9615.1.1 ID=mRNA_A-nodosum_M_contig9615.1.1|Name=mRNA_A-nodosum_M_contig9615.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1486bp|location=Sequence derived from alignment at A-nodosum_M_contig9615:13218..14703- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9615:13218..14703- >mRNA_A-nodosum_M_contig9615.1.1 ID=mRNA_A-nodosum_M_contig9615.1.1|Name=mRNA_A-nodosum_M_contig9615.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=396bp|location=Sequence derived from alignment at A-nodosum_M_contig9615:13218..14703- (Ascophyllum nodosum dioecious)back to top |