mRNA_A-nodosum_M_contig96.49.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig96.49.2
Unique NamemRNA_A-nodosum_M_contig96.49.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: D8LFE9_ECTSI (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE9_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 4.820e-72
Identity = 117/185 (63.24%), Postives = 139/185 (75.14%), Query Frame = 2 
Query:  395 KKLKEFTLVFCRRTSSSS---------------VDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLRDLPSAETIQEI 904
            K +K+ TLVFCRRT  SS                     E+LLG+KK+GFGEGKWNGFGGK+E+GE+VEEAAKREL+EE+GV A+ LSLRG+L F+VPSY S+MRV VYEAVS+ GEP ESEEMRPRWFR  DLP KEMWADDEHWMPLFL GK F+GEF+FSDEQTI+ + L  +   E +Q +
Sbjct:   16 KSVKDLTLVFCRRTKRSSDIGSEGXXXXXXXXXXXXXAKEILLGMKKRGFGEGKWNGFGGKVESGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYPSVMRVHVYEAVSFEGEPEESEEMRPRWFRIRDLPLKEMWADDEHWMPLFLEGKSFRGEFHFSDEQTILRHVLEAVTPQEMMQVV 200
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A6H5JY16_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY16_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 8.510e-68
Identity = 117/201 (58.21%), Postives = 140/201 (69.65%), Query Frame = 2 
Query:  395 KKLKEFTLVFCRRTSSSS---------------VDDGCNELLLGLKKQGFGEGKWNG--------------FGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLRDLPSAETIQEIAS 910
            K +K+ TLV CRRT   S                +D  NE+LLG+KK+GFGEGKWNG              FGGK+E GE+VEEAAKREL+EE+GV A+ LSLRG+L F+VPSY S+MRV VYEAVSY GEP ESEEMRPRWF+  DLP KEMWADDEHWMPLFL GK F+GEF+FSDEQTI+ + L  +   E ++ + S
Sbjct:   57 KSVKDLTLVLCRRTRRISDTGSEGXXXXXXXXXXNDDANEILLGMKKRGFGEGKWNGEGQRAMESWLRESRFGGKVERGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYHSVMRVHVYEAVSYEGEPEESEEMRPRWFKIRDLPLKEMWADDEHWMPLFLEGKSFRGEFHFSDEQTILRHVLEAVTPQEIMEVVLS 257
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A835YJU4_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU4_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.370e-57
Identity = 98/164 (59.76%), Postives = 124/164 (75.61%), Query Frame = 2 
Query:  368 SLMAAPKEGKKLKEFTLVFCRRTSSSSVDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIID 859
            ++ A P+E K+ ++ TLVFCRR ++        E+LLGLKK+GFG GKWNGFGGK+EAGE++E AAKRELLEE+GV A +++ RG LTF + SY  IM+V +YEAV + GEP ES+EM PRW+RE  LPF+ MWADD HWMPLFLAGK F+GEF F  +   ID
Sbjct:    7 TVAALPQE-KQPQDLTLVFCRRRTADGP-----EILLGLKKKGFGTGKWNGFGGKVEAGESIEVAAKRELLEEAGVTATKVAKRGHLTFVLDSYEHIMKVHLYEAVEWHGEPTESDEMAPRWYREDALPFELMWADDAHWMPLFLAGKSFEGEFIFKPDSVSID 164
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A7S2XVA8_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVA8_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.520e-57
Identity = 93/156 (59.62%), Postives = 120/156 (76.92%), Query Frame = 2 
Query:  401 LKEFTLVFCRRTSSSSVDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKL 868
            +K+ TLVFCRR   ++ +    ++LLGLKK GFGEGKWNGFGGK+E GET+E AA RELLEESG+ A+ L  RG L F+V +Y ++M V VYEA  + G+P+E+EEM P+WF E  LP ++MWADD +WMPLFL GK+F GEF FSDE TII+++L
Sbjct:   63 VKDLTLVFCRRLCENTSEP---QILLGLKKFGFGEGKWNGFGGKVEEGETIESAAARELLEESGLQAEELEQRGHLAFHVDTYPAVMSVHVYEATRFKGQPKETEEMIPKWFDEDKLPLQKMWADDTYWMPLFLGGKYFAGEFLFSDESTIIEHRL 215
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A482V0Z0_9ARCH (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V0Z0_9ARCH)

HSP 1 Score: 171 bits (432), Expect = 3.300e-48
Identity = 83/171 (48.54%), Postives = 114/171 (66.67%), Query Frame = 2 
Query:  380 APKEGKKLK-----EFTLVFCRRTSSSSVDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLRDL 877
            A +EG+ +K     ++TLVFCRR S +       ++LLG+KK+GFG GKWNGFGGK+E GE+VE+AA+RELLEESGVIA  L   G L F +   + IM V V++   +  E  E+EEM P+W+ E  +P+  MW DD +W+PL L  K F G F + DE TI+DY +R++
Sbjct:    2 ASEEGQDVKAYTSQDYTLVFCRRPSQTPT--ASKQILLGMKKRGFGVGKWNGFGGKIEEGESVEQAARRELLEESGVIANSLQRIGYLVFKLTDIAKIMHVHVFQTFEFTNEAVETEEMLPQWYAEDSIPYTNMWMDDAYWLPLLLEHKQFIGRFEYEDEDTIVDYSIREV 170
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: W7U305_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U305_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.410e-45
Identity = 81/183 (44.26%), Postives = 126/183 (68.85%), Query Frame = 2 
Query:  350 ANKRGASLMAAPKEGKKLKEFTLVFCRRTSSSSVDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYV-GEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLRDLPSAETI 895
            A +R  +  + P+   K K  TL+F RR + ++      E+LLG+KK+GFG+GKWNGFGGK+E  ET++ AA REL EES + A    LRG++TF   +   +++V V+EA+  + GEP+E+EEM+P+W+ E+++P+++MWADD++W+PLFL G+ F+  F F DE T++ Y L  +P  E +
Sbjct:   95 AERRMKASSSVPQPTLKTKLLTLLFVRRANPTT---NVKEVLLGMKKRGFGQGKWNGFGGKVETNETIKAAALRELEEESCLKASDAELRGKITFTFLTIPEVLKVHVFEALGPIEGEPQETEEMKPQWYAESEIPYEKMWADDKYWLPLFLEGRRFKALFEFDDESTLLRYDLGTVPEGEEL 274
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A1F5BT80_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_46_25 TaxID=1797298 RepID=A0A1F5BT80_9BACT)

HSP 1 Score: 160 bits (406), Expect = 1.690e-44
Identity = 79/158 (50.00%), Postives = 111/158 (70.25%), Query Frame = 2 
Query:  404 KEFTLVFCRRTSSSSVDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLRDL 877
            K  TLVF RR S         ++LLG+KK+GFG G+WNGFGGK++ GE+VE+AA+RE LEE+G+ A+ LS RG L F        + V V+EA+S+ GE +ESEEM P+WF  T +P+  MW DD+ W+P+FLAGK F GEF F+D+ T+I + ++++
Sbjct:   14 KFLTLVFARRAS---------QILLGMKKRGFGAGRWNGFGGKVKDGESVEDAARREFLEETGLAARELSKRGDLHFTFAGDPVALYVQVFEALSWDGEAKESEEMAPKWFFLTKIPYDAMWPDDKLWLPIFLAGKKFTGEFAFTDQNTMISHSVKEV 162
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BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A7K8KUM5_9GRUI (Oxidized purine nucleoside triphosphate hydrolase (Fragment) n=3 Tax=Otididae TaxID=54375 RepID=A0A7K8KUM5_9GRUI)

HSP 1 Score: 159 bits (403), Expect = 4.290e-44
Identity = 71/138 (51.45%), Postives = 101/138 (73.19%), Query Frame = 2 
Query:  464 NELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLRDL 877
            + +LLGLKK+GFG G WNGFGGK++ GE +EEAA+RELLEESG+    L   GQ+TF    +S +M V V+ A  + GEP+E++EMRP+WF++  +PFK+MWADD +W PL L  K F+G F F  + TI+++ L+++
Sbjct:   19 SRVLLGLKKRGFGAGLWNGFGGKVQPGENIEEAARRELLEESGLTVDTLQKMGQITFEFVGHSELMEVHVFRADHFHGEPKETDEMRPQWFQKKKVPFKQMWADDIYWFPLLLQKKMFRGYFKFQGQDTILEHTLKEV 156
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A2H0SCH5_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H0SCH5_9BACT)

HSP 1 Score: 160 bits (405), Expect = 4.690e-44
Identity = 84/171 (49.12%), Postives = 108/171 (63.16%), Query Frame = 2 
Query:  356 KRGASLMAAPKEGKKLKEFTLVFCRRTSSSSVDDGCNELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSYSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKL 868
            +R     AA    + +K  TLV         ++DG   +LLGLKK+GFGEGKWNGFGGK+EAGET+E+AA REL EE+G+I   L       F     +   RV  + A S+ GEP+E+EEMRPRWF   ++PF +MW D+EHW P FL GKFF G F F D  T+ID+K+
Sbjct:   17 RRVIKAQAAQTRRRAMKVCTLVI--------INDG-ERVLLGLKKRGFGEGKWNGFGGKVEAGETIEDAAARELKEEAGIIPIDLRKVALFEFLFDDDTEDTRVHFFCASSFTGEPQETEEMRPRWFLHDEIPFNDMWVDNEHWFPHFLTGKFFHGTFLFKDTSTLIDHKI 178
[Close]
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Match: A0A7C4NGQ0_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=2 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A7C4NGQ0_9BACT)

HSP 1 Score: 159 bits (402), Expect = 5.010e-44
Identity = 67/137 (48.91%), Postives = 107/137 (78.10%), Query Frame = 2 
Query:  464 NELLLGLKKQGFGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPSY-SSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPLFLAGKFFQGEFNFSDEQTIIDYKLR 871
            N++LLG+KK+GFG G+WNGFGGK++ GE +EEA KREL EE G++A+R+  +G L F        I+ V +++ + + G+PRESEEM+P+WFR+ ++PF +MW DD++W+P+FL GK  +G+F+F+DE T+++Y+++
Sbjct:   15 NKILLGMKKRGFGVGRWNGFGGKVKEGEKIEEAVKRELKEEVGILAKRIEWKGVLNFVFDQNPEEILEVHLFKVLKFEGKPRESEEMKPKWFRKEEIPFDKMWPDDKYWLPIFLNGKKIEGKFHFADENTLLNYEIK 151
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.49.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE9_ECTSI4.820e-7263.24Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A6H5JY16_9PHAE8.510e-6858.21Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A835YJU4_9STRA1.370e-5759.76Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A7S2XVA8_9STRA2.520e-5759.62Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A482V0Z0_9ARCH3.300e-4848.54Oxidized purine nucleoside triphosphate hydrolase ... [more]
W7U305_9STRA1.410e-4544.26Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A1F5BT80_9BACT1.690e-4450.00Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A7K8KUM5_9GRUI4.290e-4451.45Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A2H0SCH5_9BACT4.690e-4449.12Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A7C4NGQ0_9BACT5.010e-4448.91Oxidized purine nucleoside triphosphate hydrolase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:458684..467155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFE9
Preferred nameNUDT1
PFAMsNUDIX
Model size1194
Max annot lvl2759|Eukaryota
KEGG koko:K03574,ko:K17816
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0001669,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006259,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0007154,GO:0007275,GO:0007548,GO:0007568,GO:0008150,GO:0008152,GO:0008406,GO:0008413,GO:0008584,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0012505,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022414,GO:0030141,GO:0030515,GO:0031090,GO:0031410,GO:0031668,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0032501,GO:0032502,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0035539,GO:0036219,GO:0042221,GO:0042262,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044713,GO:0044714,GO:0045137,GO:0046060,GO:0046061,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046546,GO:0046661,GO:0046686,GO:0046700,GO:0047429,GO:0047693,GO:0048513,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051716,GO:0055086,GO:0061458,GO:0070013,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0090304,GO:0097159,GO:0097223,GO:0097708,GO:0099503,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576
Exons5
Evalue4.69e-75
EggNOG OGsCOG0494@1|root,2S254@2759|Eukaryota
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-07_006020.1
EC3.6.1.55,3.6.1.56
Description2-hydroxy-adenosine triphosphate pyrophosphatase activity
Cds size729
COG categoryL
BRITEko00000,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.49.2prot_A-nodosum_M_contig96.49.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig96 458953..466959 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870470.7345786-UTR-A-nodosum_M_contig96:458683..4589521680870470.7345786-UTR-A-nodosum_M_contig96:458683..458952Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig96 458684..458952 -
1680870470.8056014-UTR-A-nodosum_M_contig96:466959..4671551680870470.8056014-UTR-A-nodosum_M_contig96:466959..467155Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig96 466960..467155 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870470.7479897-CDS-A-nodosum_M_contig96:458952..4591171680870470.7479897-CDS-A-nodosum_M_contig96:458952..459117Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig96 458953..459117 -
1680870470.757326-CDS-A-nodosum_M_contig96:459350..4594491680870470.757326-CDS-A-nodosum_M_contig96:459350..459449Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig96 459351..459449 -
1680870470.7671714-CDS-A-nodosum_M_contig96:459677..4598201680870470.7671714-CDS-A-nodosum_M_contig96:459677..459820Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig96 459678..459820 -
1680870470.779808-CDS-A-nodosum_M_contig96:463070..4632531680870470.779808-CDS-A-nodosum_M_contig96:463070..463253Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig96 463071..463253 -
1680870470.794615-CDS-A-nodosum_M_contig96:466820..4669591680870470.794615-CDS-A-nodosum_M_contig96:466820..466959Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig96 466821..466959 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig96.49.2

>prot_A-nodosum_M_contig96.49.2 ID=prot_A-nodosum_M_contig96.49.2|Name=mRNA_A-nodosum_M_contig96.49.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=243bp
MNTYVMSRKAILVCLSFLLIQSDSLLIRPPTHQATARLQLSSLSASPCHS
QANKRGASLMAAPKEGKKLKEFTLVFCRRTSSSSVDDGCNELLLGLKKQG
FGEGKWNGFGGKLEAGETVEEAAKRELLEESGVIAQRLSLRGQLTFNVPS
YSSIMRVFVYEAVSYVGEPRESEEMRPRWFRETDLPFKEMWADDEHWMPL
FLAGKFFQGEFNFSDEQTIIDYKLRDLPSAETIQEIASTLNV*
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mRNA from alignment at A-nodosum_M_contig96:458684..467155-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig96.49.2 ID=mRNA_A-nodosum_M_contig96.49.2|Name=mRNA_A-nodosum_M_contig96.49.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8472bp|location=Sequence derived from alignment at A-nodosum_M_contig96:458684..467155- (Ascophyllum nodosum dioecious)
CCCTGCGTCCGCCGAATTCGCCATGCTAATTGCAGAAGACTTAGACGGTT
AGCTCCACACGCTTTGTTCGTCGATCACCAGCCCGTCACGAACACATCAT
GACAGTTTCGAAAAAAAGAAGGGAAAAAAAACAAAAACAAAAACAAGGGA
GTTCCAACCAGATTGACGCCTCAAGGAGCTCTAAATTTGGTCGACGATGA
ATACCTATGTCATGTCGCGCAAGGCAATCCTTGTCTGCCTCTCTTTCCTT
CTAATACAGTCAGACTCTCTCCTGATCCGACCACCAACGCACCAAGCAAC
CGCTCGTCTGCAACTATCCTCGCTGAGCGCTTCACGTGAGCTCGAAATTT
CGATTTCAAAATATGTTGATGTACGCTGCCTTTTGAACCACAGCAGATTC
TACCAGCCGTCGTAGTACTCGTACAAGCCAACCAGTAGAGGTACAGCATT
CTTACCACCCCAGGGGTAGTCTAATGTGTTGTACAGGGTGCTGTAGGAGT
ATCCACTTTCCAGAGAAAATCTGCACCTTCCGGGTATTCACAACGTCGGA
GGGAACTTTGTCGAAACGTGGTCGGGAGTTTTCAAATCATGTGCCGACCT
AGACCTCTCAATCTACACACAGCAGAGTATCGTATATAGCTGGAAGCTGG
AAGACCACCCAAACGTTTCGGCCTGATCTCCGCGGGCGGTGGATGGCATC
CACTGGATGCTCCAATGATTGTGATGGGATCTGTCGGGGTTTTTTACTTT
TTCTAAACACCCCGATCAACTTGGGAAATGTTTGTATGTCTGCTGTACTA
TAGAAAAAGTCTGAACCCATCCATACGTTCCATGTCAGTTGTTGTACAGC
ACTGCATATATATATTTACATTTTGTAGGTGATTCATCATGTTGCATTTT
CTAAACAATATTTTGGCTTTTCCTTAAATTCGCGGGGTTTCCTGCTGGGT
TCAACACAACTCGTTTTCCCGCCCTCGGCAACAAAGCGGAAGACTCGCAG
TACATTTTCCATAACCCGACTCGGCCAATCCGATTCGTGGTCTGATGAAC
ATAAAAACTCCAGGGGTTTAAAGAAAAATCAGAACGTACCTAGACCTTCT
GAGCATCCCCCAGTCAGGGGAAAAAATGTCAAAACTTTTAGGTGGGATCA
TAGGCTGCAAATACAAAACCTCTTCATGGCATTTAAACGGGTTCCCCTAT
GGTAGTAACATTGGGTCAATAGTATAATATCGGGGAGAAGCCCACCGTTA
TACTGTACACTTACATGAATCGCCATGCAGGGACACTAGAAAAACAGCGA
AGACAAAATATTACATCATCAAACATGGTAGTAATAATATACTGTTACAT
ACCTGGTAGGCTGTATCAGACGATAAATTTAGGACGTGGAACGGAAACGG
GGGCAAAAGAGACACCGCGACGGCGGTGTGGAAGTGGGACGTTGTACCAT
ATTTTGTATTTACAGTGGTACAGGGGTGTGGATTTTGATTAGCGGAAGCG
GTGCGGGAGCGGACGCGGAAGGAACCACTCCGTAGTGCAGAATGTGGTGC
GAAAGTAGATGTGGAACGGAATCGATTGACCGCGGAACGGTAGCGGAGAA
ATATGGCGGATGGCGGATGGCGGTTACTACGTTTGGATTCTGATTTGACC
GTGCCGTATAATGGTGCGGGGGGAGGCATCGCCGATCGCGGAACCCATCG
ATCAAAATGGAAGAACATGTAATTGTTTTATCAACTACCAGTTTTTAAGG
GAGCCTCTTTTAATATTTATTGAATTGTACATAACGGAGCAATCCGGCCC
TGTCATACCTAGTCATTCTATGTCACTTGCATTGATCGAATCTCTCAGGG
AGGGATCATTTATTTTTGTTACGAAAACCTCTGATCAGACGCGACAAGGG
GACACTCTCTCTCTCTACAGTTTTTACTCAAGCCCTTAGCGCCTTGCTCT
TCTCTCGCTGCTTCCTTTCTACTCTCTAGATCTTCTGGGCCGATATCCAC
TGAACCAACACTTTCTTGTCTACGCCTCTTTCTCCTTCCGCCCAAGTCTC
CCTCGTCTCTCTCATCGCGTCTACAACTACAACTCTTGTGGGGTTTCTTG
CTCTTCTTCGCCTCTCCTCCGCCCTCCCCGATCCTGTCGCTCGCCTCCCG
TCATGGGCTTCGGCCCCTCGTATAATGCGACGGTCTCGCTGGGGCGTCGG
GTCTTGCGGCTGGGGTTGCCGGTTACTCGTTGGCGTTGCCCCCTCTTTCG
CGTCTTCCAACCCTAACACCCCTACCTCTATTACCACTTCGAAGGTTCCC
GGACTCTCTCTCTACCTTCCACCCTCATGTCTATTCTGGTTCCCGCTCCC
GTTGTCACCCACATCCCTACCCTCGAGCTCATTCCTGTACTCGTCCTTGG
TTACTCCTTCCCGTCCCTAGTGCCCTGTTCTCCCCTCGGTACCACATCGT
CGGCCAGGTGCCGGATCTTGCGCCAGAAGCTGCTGGCTACCTGCACGCGC
TACCTCCTGTCTACAGAGATGATGCCTCGTGCGGAATGTCTGTACCTGGT
CTTCTACTTTTCTTCTTGCCTGATGTGTTGGATACGAGAGCTCTCCTCCT
CCCCCCTTCCCTCTCTCCCTCCCTCTCCATTCTCGTTCCCTTTCCCTTTC
CCGTCCCGTTTCCGATCCCATCCCCGTTCCCATCACCGTCCGCATCTCCG
CTACTGCCCTCGTTTCCGTCCCCGCTCCCGTCCCAATTATCTGCTTTATT
GTAATCATGTCGGCAGTAATAACTGAACTAAACCCATCATAGACAAATCA
AGACAAGTATTGAGGGGTCCAGCAGACAAGATGCGGCGAGATTACTACTG
TATTTTTAATAGTAATAATAGTATCAGTTCATCCGCGCTTTCTACCAGGG
AAGCAACAAGCAACATTATTTCACGTTGGAAAACGGGGGTTGGGAGCATG
GGGCCACTGGTAGTGGTCAGTTTGTTTTTTTTGCAGCTCCAAAAACGCCA
TCACCGGGAGTTCCGTCCGTCCTCTATGAATACTTCTAAGCAATTCGGAT
TTAAGACATGCCTTCTCCTAACCTCAGCCTTGGCCCTTGGGCGCAAGCCG
TTCTCCTTGATGGAATCTCGAACCGTTAGAAATATTTTGCTGTTTCTTGT
CTGGCATTATGCCTTGAAAATCGGAAATAACATGAATGATGCGTTGCTCT
GGTCGTGGGTGTGTTTTTGTTTGTGTGAGTGTGCAGTCATCACCTTGTAT
GATTCCGCCGATACTTTCAACATGCCCACTTCATACCAATAATAGTACAT
AATATTAGTGGGTGTGGGAAGGAGAGGCGCATATTAATCGGTTCATGGTA
ACCTGCCAAGGCAGCACCCGTTACTGGAACTACCTTGAGGTTTACTGGCC
CTGTGTCGACGGACTGTTGTCAGTGAACGCCATCGGTACGCAATTGCGTG
ACCTGATAAACTCGGGACTCATCCGATGTCGTAAAGCGGTTTAAATAAAC
AATTGGACGCCGCCACGGGAATCGGGAAGAATCCCATAAGCAAGCACCAA
GTTCAGCCTGAGTATGAAGATGGGCAAGTTGACGCGGGGCGGGACTGCCG
AACCCGTCTCGCGAGACCAAAAACGGAGACAGGGAAAAGTTCATTTTCCC
TGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGGTCCTTC
TCTTACTATGTGTGATGACAATACATACATAATTTCATACCAGTACGTCA
TTAGAAGGCATGGGGCAATCCTAGGAGAAAAATAAAATAAAAATGAAGTA
TATATAAAGATAAATAGGAAAACCGTTACACTTTTCTGCTGACGGTGTGG
AACAACAACAAAAAGCTCGAACTAATGGAAGGCGCTCGTGTGTCGACTGA
AGCTTGTCACTCGCAGGCCAACAAGCGTGGTGCGAGTTTGATGGCTGCTC
CAAAAGAGGGGAAGAAGTTGAAGGAGTTCACGCTGGTGTTCTGCAGGCGA
ACATCGTCGAGCTCTGTTGATGACGGCTGTAACGAGCTGCTCTTGGGGCT
CAAGAAGCAGGGCTTTGGAGAAGGGAAGTGGAATGGTGAGCACGTCCAGA
GGACTGGGTGCCTCTTTTGAGGGTCCGTTTTTTCATTAGTCTAGCGGACT
AGTCGGCCCTTTTCATGTACTGTATAGGTTTTGTGTGTGGGGAAACTCGC
CCTATTATATTAATATTAATAGTAGTATGTAGTATTAAGGGAGATATTGT
TGGAAGACGGGGGGATCCCCCTCAACGTTGCCGACACCCGATCCTGATCC
TGATCGATCCTGATCGATCCTAGGATAATTAATTACAGTGGTACGGATAT
AGAGGGGGATGGGTATGTTAGACAAAATGGCGTGGCGGATGAGTTTTGTT
CCGGCCAGTGTAAAGGCCTGTATCAACGGTGTTCCGAAAATCAAAATTGG
AATATCAAAAATCATAAATCAAAGTTTGATGAAGAAAAAAACACTGCGAG
CCATATTAACGGAAATTACTCGAACGGGACTATAGGGAGCTGTTTACGCC
GCCAGTATGTAAAACCTCTCGTGGCGTTGGAAAAATCCAAGAGAACACCA
CAGTACTATTACTACTGCTTTACTGCTGACCTCACCGTAATGGACGATAT
TGTGTGAGGTACCCTTCAACAAAGACAGAGAGAGATAGAGGGAGAAAAAG
AGAGTCAACAGCAGGAGGAGAACTACTGGTACATAGTACACATACGAAGT
CTATATCTGTGCTGAGGTAGTGGGGGAATAAATGCCGTTTGTACAAACAC
TTCGTTGTAGCTGCGAAAAAATAAAAGGGCAGGTAGAGAAATGGCGACAT
TGTTGTGTGAGGTATCCTTGAACAAAATCAGAGAGAGAGAGAGAGGGAGA
GAGAGAGAGGCAACAGCAGCAGTAGAACTATTACTGGTACATATTACACA
TACGAAGTCTATCTGCGTGCTGAGGTAGCACCCGTCGCCTTTTGGGTTGT
ATCGGCGTCTCCAAAGTTCAACACCACTCGTTGCGCCTGTCCCCACCACC
CGCTGGTAGAAGTAACGGTCGCCCTCGCCGTGGGACCGTTGGCGTGGGCC
ATGCCAGCAGGAGCGGTGTGTATGGTGTGGCGGTGCAGTCTGTCTACGTG
CTGCTGTTGTAAAACTACTGTGCTCTGGCCTCTGGCGTGTAGCATTCGGA
AAGCCTTCGATCAGGTGAACACCTCCTATTTTGATTTTCCAAAAAATAAA
CATTAAGTCCCTGGGGACTTCTTTGGTTTGGCAGCGATTTCCAAAAAATA
AACTGGCGTAGTCAGGAGGTTTTAGGACCTCGACCAATCAGAGCCCAATT
TTTATTTTTATTTTTTCCGATTTTGATTTTCGGAACATCGTTAATACAGG
CTCTAACCGTATAAAAAATATGGACTTGAACGAAAAGAAAGCCTTCTACG
GATGTCGAAAACGTGTCGATATTCCACGACTCGTCACTTTCTCCCGGAAA
ACTAGAGTCTGGGCAAATCCAAATACATCCTTACTTCCAGCGAAAAGTTT
TGGAAAACGCGAGAAACAAACTCCGGGATAATTCCACAGGTGTTTGGAAA
ATTGTCGCCACATCGGGGACTTTTATACGGAAATCTATACAGCCCGTTGG
GTTGCCACCCGCCCTTGAGGATCCGCGTTCCGTTTAGCCGTGGACGACAA
CGATGATTCCGATGCAGCTCAAACGTATGTTTTCACCTCGTCGATTGGTG
CCATGACATGTCGTGGCGTATGTTTGGGTAGCCGGCATATTTCCGTATTT
TATTGTCGGGATGCCGCTCGCCCCTCTATCGGCTCGGTCGATCATGCTAT
CAATATTAATATATTACTATTAGCACGTACCGCCCGTCTTTCTTCCTTGT
AGGGTGTACTACCAGCACACCGCTCACATTCTGCCGTTTGGAGCCCTCGC
TTCTCCAACCGGGGGGGGGGGTAATGCCGTGGGCGTCGAACGAGCCCTCT
TGACCCCTTCTATGCCCGGGTGTCGTGCTCGTGTATGTGTTTAAAGAAAG
ATCAGAACGCACCTAGACCTTCTGAGCATCCCCCAGTTAGGGGGAGAAAA
ATGTCAAAACGTTTAGGTGGGATCAAAGGCCGCAAATACAAAACCTCTTC
ATGGCATTTAAACGGGTTCCCCGATGGAAATAACATTGGGTCAACAGTAT
AACGTCGGGGAGAAGCCCACCGTTATCCTGTACATTTACATTAAGCGCCA
TGCAGGGACACCAGAAAAACAGTAAAAACAAACCAGAAACAATGTAGTAG
ACCATCACACATGGTAGTAGTAATATAGTATTACATACCTGGTAGGCTAT
AAATACAAAGCCACAACATGGTATTTAAACGGGTTCCCCAATGGTAGTAA
CCTTGGGTCAGCAGTATAATGTCGGGGAGAAACCGACCGTTATACTGTAC
ACTTATATGAATGACCATGCACAGCCACCAATCATACCCAACACAACCAC
TGTAGTACATAGTTACGAGGATAGTACTGATGTCGATAATAGTACCATAG
AGCCATACAAGAATAGGGGCTTGGGTAAACAGTAAAATGTAGGAGAGAAA
TCCACTAGTATACCGTACAATATCATTAATTGCCATGCAAGGATATCGCA
CAAACACAGAATACACGGGAAGCTTGGGTTAAAACTCAGTTTGTTACATT
ACATCAAGGATCGGATGGGTGTCACTGAAGGGGATTTACAGGTACAGATG
TAGACGTAATCCTGGGAAATTGTACAATACCTTTTGTTATACTGGTACGT
ATTTAACGAAAGATCAGCCCCCGCCTAGTAATTTAGTACCAGGTAGTATA
TAGTACAATGCAGTGCAGTATCATAGAAACAATGATATGCTATCATAGGT
AGTACATATCAAAACACGCCTAGACATGTGATTTGGGAGAAGAACTCTTC
GGAGTTTGTTCTCCGTTCCTGGACACTGTCTTGATCTCAAAAGCCATCAT
CAGCACCAAGATTTTTCGGTTTCCCGAATTTTCAAACTTCTCCCCCACGG
GAGTGAAGCTTTACCAGTATACCACATCTGTCTTCTTTCCTTAGGTCGGG
AAGGGCGGAGATTGAGCTCTCTTTTCTCTCTTTTCTGTGGGTCGCGATAT
TATTGCCTCGCGTGCGCGATGGTTGGGTGTCTTCTCGATTAACGTCAGAG
CGCTTCCCTCGCTCGACTCGAAGGGTCTAAAGCGGCACCGCCTTCGGTCA
GGGTGGTCGGGGTAGATACACACGGCCAAAACCAGGTCTCGTGCGACTCT
CACTATATTTTCGCTCCAATTGCTCGCTGCGTCAGGTTTCGGAGGCAAGT
TGGAAGCCGGAGAGACTGTGGAGGAGGCGGCCAAGCGGGAGTTATTAGAG
GAATCCGGCGTTATTGCGCAGCGGCTATCCTTGAGAGGGCAGCTGACCTT
CAACGTGCCCTCGTATTCCTCCATCATGGTGAGTGAGTGCCAAGCGCCCA
GAGGCTATTAGGGCAGGCCTAGACCAGTAGAACACGCGCCAGGTTGAAAG
GTTCGGAGCAGAATCGTGGACCCATGCCCCGGTCGCGTAGCGAAGCCACG
TAAAACCCAACTATTTAATCGCACTCCGTTTAACGTTCGCTCTGACGTTG
GAACCTTTCCTTCCTTGGGCGAACGGGGGGGTGTTACCGCTGCATTCCAA
TTGCAGCGGGTGTTTGTGTACGAGGCGGTTTCGTACGTGGGGGAGCCTAG
AGAGTCGGAGGAGATGCGACCTCGGTGGTTCAGGGAGACTGATCTACCCT
TTAAGGTAACAATATTTTATGTCTGTTCGTTAAACTGCTTCCAACTGATG
GATATTGAACGCATGTAGAGTCCACGCTTTGATGGTTCCCGAACCGAAAA
GGCGTCGGGCAAGGCTTGAATCGTGTACCAGAGGTGGATACTGTTTTAAG
TATTATTTTATATCGAATGAATAAAATGGTGCATGCGGTAAAAAAAACGT
CAAAGCGCCAGCGCCAACGCTTTTGTGTCTCTACACAGGAGATGTGGGCT
GATGACGAGCACTGGATGCCGCTGTTCCTGGCCGGAAAGTTCTTCCAGGG
AGAGTTCAATTTCTCCGACGAACAGACGATTATCGACTACAAATTGCGGG
ATTTACCATCGGCGGAAACGATACAAGAGATTGCATCGACATTGAACGTT
TGAGGATGAAAAGCTTGGGGGGAGAGCTTTTCTTACTTCTTTTAATAGCA
GTGGAGATTTATGTCATTGGCGCATACATATATATATATTTATCTGGTAT
ATATATTAGAAGGAAAATAATAATCGTGGCTTGGAACGAGAACACGAGTA
TGAATACAGTACAGTTGTTCGAGTGCTGTATTATAGCTCTATTAATAAAC
TTTATACTGCAAATATGTGGCCGAGGTCGTTATTACACTCAGCGATCGCT
GCAGCGGCCACAAACGGCCAAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig96:458684..467155-

>mRNA_A-nodosum_M_contig96.49.2 ID=mRNA_A-nodosum_M_contig96.49.2|Name=mRNA_A-nodosum_M_contig96.49.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=729bp|location=Sequence derived from alignment at A-nodosum_M_contig96:458684..467155- (Ascophyllum nodosum dioecious)
ATGAATACCTATGTCATGTCGCGCAAGGCAATCCTTGTCTGCCTCTCTTT
CCTTCTAATACAGTCAGACTCTCTCCTGATCCGACCACCAACGCACCAAG
CAACCGCTCGTCTGCAACTATCCTCGCTGAGCGCTTCACCTTGTCACTCG
CAGGCCAACAAGCGTGGTGCGAGTTTGATGGCTGCTCCAAAAGAGGGGAA
GAAGTTGAAGGAGTTCACGCTGGTGTTCTGCAGGCGAACATCGTCGAGCT
CTGTTGATGACGGCTGTAACGAGCTGCTCTTGGGGCTCAAGAAGCAGGGC
TTTGGAGAAGGGAAGTGGAATGGTTTCGGAGGCAAGTTGGAAGCCGGAGA
GACTGTGGAGGAGGCGGCCAAGCGGGAGTTATTAGAGGAATCCGGCGTTA
TTGCGCAGCGGCTATCCTTGAGAGGGCAGCTGACCTTCAACGTGCCCTCG
TATTCCTCCATCATGCGGGTGTTTGTGTACGAGGCGGTTTCGTACGTGGG
GGAGCCTAGAGAGTCGGAGGAGATGCGACCTCGGTGGTTCAGGGAGACTG
ATCTACCCTTTAAGGAGATGTGGGCTGATGACGAGCACTGGATGCCGCTG
TTCCTGGCCGGAAAGTTCTTCCAGGGAGAGTTCAATTTCTCCGACGAACA
GACGATTATCGACTACAAATTGCGGGATTTACCATCGGCGGAAACGATAC
AAGAGATTGCATCGACATTGAACGTTTGA
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