mRNA_A-nodosum_M_contig954.24.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: D7FVN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN8_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 5.470e-173 Identity = 303/490 (61.84%), Postives = 357/490 (72.86%), Query Frame = 3
Query: 180 MALENELLVVLLLSAVWAIERCCMYVNASPIIGQILAGLIVGPALLDLIPFVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLN-------------DPARRRYSSGST---------PNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPST---------GAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRALMVD 1556
MA+ENEL VVLLL VW +E C +N SPIIGQI GL+VGPALLDLIP VEAF+LLGKLGVMILV+ESGLAVD+ DIRR G RAS+AAATGV+LPT++SFALY+GVL A WK ALAVGA+LSPTSLGFSAQLLGEVG+L+TP+G LICTAAVIDDVLSLLLLAEV+AL E+ + Y +PVLAS GS+L+GG+ V +SSKTE L + L SLN PARR + T P+ RS V +PA Q+ T E G ++S P A V T G +V GDR LL MVLA SL+FAY S+LVGSSDLLGCFLGG+A SG+PGVQ +WARQM R++QWGARLFFS TVAFSVPS+YKDGGLL WKGL+LTVAA++GK+ VG +AG PLT++GFLK+GWAMNGRGEFSFFIA+ A+ ILT ++SAVV ALLLSS+ AP+ FRR L D
Sbjct: 1 MAIENELRVVLLLCVVWLMEVACTRINVSPIIGQIAGGLVVGPALLDLIPHVEAFKLLGKLGVMILVVESGLAVDIQDIRRFGARASLAAATGVLLPTVLSFALYSGVLGAGWKAALAVGAALSPTSLGFSAQLLGEVGQLTTPIGQLICTAAVIDDVLSLLLLAEVQALADENPKWHDYAVPVLASVGSVLIGGLAAVYISSKTEPLGAWLSSLNKKSSSNDNGRLSSSPARRAEVATGTARQGEQDLSPSVYRSPPVVDEPAAAVDRGQTLVDTTTVPLEPG--VFSTPAAVAVSPTLYGGDAGRQGDASSVRRGDRALLTMVLAFSLVFAYLSSLVGSSDLLGCFLGGLAFSGVPGVQTIWARQMKRYSQWGARLFFSATVAFSVPSVYKDGGLLRVKPFWKGLILTVAAIVGKVVVGFYAGPPLTLSGFLKLGWAMNGRGEFSFFIAQEASDEGILTTGDYSAVVWALLLSSIAAPVFFRRVLAKD 488
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A6H5JDJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ7_9PHAE) HSP 1 Score: 369 bits (948), Expect = 2.980e-115 Identity = 227/433 (52.42%), Postives = 274/433 (63.28%), Query Frame = 3
Query: 393 LAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWK---------------------------------------------EALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLN-------------DPARRRYSSGSTPNP----LRSELVQSKPADTDASRQSD---TMLTDGAFEAGENIYSQPGASNVPST---------GAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILT 1469
LAVD+ DIR+ G RAS+AAATGV+LPT +S ALY+ VL A WK ALAVGA+LSPTSLGFSAQLLGEVG+L+TP+G ICTAAVIDDVLSLLLLAEV+AL ++ E Y +PVLAS GS+LVGG+ V +SSKTE L + L SLN PARR + T L + +S P + + D TM+ ++S P A V T G G+V GDR+LL MVLA SL+FAY S+LVGSSDLLGCFLGG+A SG+PGVQ +WARQM R++QWGARLFFS TVAFSVPS+YKDGGLL WKGL+LTVAA++GKL VG +AG PLT++GFLK+GWAMNGRGEFSFFIA+ A+ ++LT
Sbjct: 8 LAVDIQDIRQFGARASLAAATGVLLPTALSLALYSAVLGAHWKVFFCLTWPYASLRVSALLELENWSNDSHTLGSIQLVERSAFSSRLAALAVGAALSPTSLGFSAQLLGEVGQLTTPIGQFICTAAVIDDVLSLLLLAEVQALGDKNPEWHDYAVPVLASVGSVLVGGLAAVYISSKTEPLGAWLSSLNKKKSSNENGRLSSSPARRAEVATGTARQGEQDLSPSVYRSPPVVNELTAAVDRGLTMVNTTTVPLESGVFSTPAAFVVSPTLYGGDAGRQGDAGSVRRGDRVLLTMVLAFSLVFAYLSSLVGSSDLLGCFLGGLAFSGVPGVQTIWARQMKRYSQWGARLFFSATVAFSVPSVYKDGGLLRVKPFWKGLILTVAAIVGKLVVGFYAGPPLTLSGFLKLGWAMNGRGEFSFFIAQEASEEEVLT 440
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A7S2WVI4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI4_9STRA) HSP 1 Score: 191 bits (484), Expect = 9.920e-51 Identity = 133/342 (38.89%), Postives = 179/342 (52.34%), Query Frame = 3
Query: 513 SWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFR 1538
S + LAVGA+++PTSLGFSA+LL EVG+L + G LIC AAV+DDV++L+LL E++AL + + P++ S SIL+G + +S + L +L L D RS +Q K L ++ LSLLF + A V SSDLLGCF G+ SG + + W+ Q+ RF QWGA LFF+ T+ F VP + + GGL S +GL++TVAAVLGKLA+GV+A P L G AM GRGEFSF IA+SA +L+ N+S V+ ALL +S AP GFR
Sbjct: 6 SARVGLAVGAAIAPTSLGFSAKLLAEVGKLESEEGMLICVAAVVDDVMALVLLTEIQALSASNPSAWDIAAPLVGSLSSILLGIFLAPFLSRR---LPTLFLHLKD---------------RSHRLQVK--------------------------------------------------LACLICLSLLFGFLCATVHSSDLLGCFFAGLVFSGDDELAQFWSTQVKRFEQWGAALFFAATIGFGVPRLAQKGGLFDAPSFLRGLLMTVAAVLGKLALGVWA-EPRGWVSGLTFGAAMMGRGEFSFLIADSAADDGLLSDTNYSGVIWALLFASFGAPFGFR 278
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: C1EH01_MICCC (Monovalent Cation:Proton antiporter-2 family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EH01_MICCC) HSP 1 Score: 174 bits (442), Expect = 2.680e-41 Identity = 142/451 (31.49%), Postives = 225/451 (49.89%), Query Frame = 3
Query: 228 WAIERCCMYVNASPIIGQILAGLIVGPALLDLIPFVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLASAGSIL-VGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVL-----GKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRALMVDRR 1562
W + +C + ++G+ILAG+ VGP L++ P +A ++G+ G++++V+E+G+ VD+A + +G R A G ++P I L V S K LAVGASL+PTS+G S ++L + G L TP G LI AAV+DDV++L+LL+E+EAL+ ++++P+++S I+ VG + T VV D L+K L +++ G +LL MV ++ + SS LLG FLGG+ + +Q VW +Q+ + W R+FF+ T+ F VP +D LW G +L AAV GK+A G+FA PLT K+G+AM+ GEF+F +A ++ L + FSAV+L +LLS+V AP+ +A+ ++R
Sbjct: 39 WIVGKCVERLGLPALVGEILAGIAVGPHGLNIAPKPDALMMVGEFGLVLMVLEAGVEVDLASLSLVGARGVQVAFFGSLVPLAIGSVLSKLVFDMSAKTCLAVGASLAPTSMGISLKVLQDGGVLGTPTGQLIIAAAVMDDVIALVLLSELEALKNPTP--VNFIVPIVSSLCFIVFVGYLATRVVP------DVLVKQLVPRVPKKHLEG--------------------------------------------------------------VLLGMVFVVAYGMMVTTHYGRSSHLLGAFLGGLCFCSLSSMQTVWHQQVEKILSWLIRVFFACTIGFEVP--IRD--------LWTGPVLARAAVFMIAAFGKVATGLFA-RPLTAVEASKIGFAMSAWGEFAFIVATASREAGTLGHQEFSAVILCVLLSAVYAPLCVSQAIKAEKR 408
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A7S1CFG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFG6_9STRA) HSP 1 Score: 168 bits (425), Expect = 9.360e-40 Identity = 145/469 (30.92%), Postives = 223/469 (47.55%), Query Frame = 3
Query: 204 VVLLLSAVWAIERCCMYVNASPIIGQILAGLIVGPALLDLIPFVEA-----------FRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLG-KLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDI---------LTAENFSAVVLALLLSSVMAPIGFRRAL 1547
VVL L A W ER SP++G I+AG+++GPA+LD++P+ F L G LGV +++ ESG +D+ IR++G +A V A G ++P + + ++A ++ + L+ GA+++PTS+G + +LL E + + G I TAA +DDVLSLL L + + G S P++AS + G + V V + L A E + S AS+ P D L L +L LL ++ +L+GS LLG F+ G++ + + VW RQ+ R W RLFFS TVAFS+P +L +LW+GL++ + +G KL GVF G + VG AM RGEF+F +AE + R D+ ++A+ ++ VV ALLL++V+AP F L
Sbjct: 9 VVLFLVAAWLAERALKAAGVSPVLGPIVAGMVLGPAVLDVVPYAHHTQEFGHDLPSFFSLAGTLGVTLMIAESGQHLDLEVIRKVGNKAFVVAILGTLVPLISALGVFALFGFDAFPDGLSAGAAMAPTSVGIALKLLHETKQQKSDFGQTIITAAFVDDVLSLLALVVLLNMAGGSVTFLSVGAPLIASVAFVAFGVFLAVKVFPR-------------------------------------------------LVPAALRRIEEVSS---ASHQPR----------DELHLGAMLLWLLLCSWIGSLIGS-HLLGAFVAGMSFTNVQRSSTVWKRQIKRIAHWLVRLFFSATVAFSIPV----STMLSVDALWRGLIVALVCGMGAKLVSGVFIGPDRWV-----VGAAMLPRGEFAFLVAEMSTRTDVVGFHEGRRLISADAYAIVVWALLLATVVAPFLFSAVL 405
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A7S0XAY4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XAY4_9CHLO) HSP 1 Score: 162 bits (409), Expect = 1.310e-39 Identity = 141/453 (31.13%), Postives = 208/453 (45.92%), Query Frame = 3
Query: 264 SPIIGQILAGLIVGPALLDLIPFVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALE----GEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRALMVDRRAEEAETVATFNGVSSG 1610
+P++G+I+ GL++GP + + EA L+G G+ +LV+E GL++D + +R +G A V A G +LP + A V S +A G +LS TS+G + +++ VGEL+TP+G LIC AA++DDVLSL++LA + L G+ P+L SA + VG + R+ TP+ L L + PA S P A ++ +LAL++ + GS+ LLG F GG++ + + G W R + W +FF +V +P G L P GL TV AV GKL G F GS VGWAM GRGE F +A+ A +L + A V ALL++++M+P+ RRAL +RR V NG SSG
Sbjct: 33 APLVGEIVVGLLLGPEGAGFLLYPEAIVLVGNFGLCLLVMEGGLSIDASTLRGVGRTACVVAVAGTLLPIGLGCAFMTAV-GFSVTTGIAAGTALSSTSIGMATKMMQTVGELNTPLGSLICVAAMVDDVLSLVILAVISNLGRASGGDGDTALKIAQPILVSAAVVAVGFVTF-----------------------RF----TPSLLAWLLKRLPPA------------------------SHPDA------------------IVCCLLALTMALVVAAGAAGSTFLLGAFAGGLSFARVEGAAEAWGRH-AELSSWLTSVFF-LSVGLRIPL----GALFSPVGFALGLGYTVPAVAGKLVTGAFTGS---WGEATVVGWAMVGRGELGFVMAQEARGEGMLGDTPYVACVWALLIATLMSPVFMRRALETNRRNASRGGVVAANGGSSG 406
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A7S0GP57_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GP57_MICPS) HSP 1 Score: 169 bits (427), Expect = 1.900e-39 Identity = 140/452 (30.97%), Postives = 222/452 (49.12%), Query Frame = 3
Query: 228 WAIERCCMYVNASPIIGQILAGLIVGPALLDLIPFVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLAS-AGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVL-----GKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRALMVDRRA 1565
W + + ++G+ILAG+ VGP +++ P +A ++G+ G++++V+E+G+ VD+A + +G R A G ++P I L V S K LAVGA L+PTS+G S ++L + G L TP G LI AAV+DDV++L+LL+++EAL+ D V ++++P+ +S A +LVG + T VV D L+K + +++ G +L GA V + G + A G SS LLG FLGG+ + +Q VW Q+ + W R+FF+ T+ F VP +D LW +L AAV GK+A G+FA P K+G+AM+ GEF+F +A ++ L + FSAV+L +LLS++ AP+ A+ ++RA
Sbjct: 40 WVVGKSVEKFGLPALVGEILAGIAVGPHGMNIAPKPDALMMVGEFGLVLMVLEAGVEVDLASLSLVGARGVKVAFFGSLVPLAIGATLAKLVFDMSAKTCLAVGACLAPTSMGISLKVLQDGGVLGTPTGQLIIAAAVMDDVIALVLLSQLEALK--DPTVVNFLVPIASSLAFIVLVGYLATRVVP------DVLVKQVVPRVPKKHLEG-------------------------VLL---------------GAVFVAAYGMMVATHYGK----------------------SSHLLGAFLGGLCFCSLSSMQHVWHAQVEKILSWLIRVFFACTIGFEVP--IRD--------LWTAPVLARAAVFMLAAFGKVATGLFA-RPFNAHEAAKIGFAMSAWGEFAFIVATASREAGTLGKQEFSAVILCVLLSAMYAPLAVNSAIKAEKRA 410
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A7S0GWS7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GWS7_MICPS) HSP 1 Score: 154 bits (389), Expect = 1.270e-36 Identity = 139/453 (30.68%), Postives = 214/453 (47.24%), Query Frame = 3
Query: 228 WAIERCCMYVNASPIIGQILAGLIVGPA-LLDLIP--FVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAV--GASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEV--------EALEGEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGSPLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRAL 1547
WA +R +P++G+I+ G+++GP+ L+ +P V A L+G LG+++LV+E GL+VDV +RR+G A + A G LP + A ++ A + V G +LS TS+G + +L+ GELSTP+G L+C AA++DDVLSL++LA + ++ S+ + P L S +++ I+ V S LV+S+ +D + AF D ++L +LAL+L + VGS+ LLG F GG+A + + G +RVW R W +FF V F VP L G G+ V A++GKL G G+ + A VGWAM GRGE F +A SA R +L + + A V ALL++++++PI R AL
Sbjct: 21 WAAKRV-----DAPLVGEIVVGMLLGPSGLVPTLPDYAVRAVFLVGDLGLVLLVMEGGLSVDVPSLRRVGSVACLIAVAGTALPIALGTAF---MVAAGFDATTGVVAGTALSSTSIGMATRLMATFGELSTPLGALVCVAAMVDDVLSLVILAIISEGLANGSDSRSSNGSKALTAATPALVSVAVVIIAAILFRTVPSAIS-----------------------------LVKSRTTRSDEN---------AAF---------------------------DAVVLASMLALTLAATVGAGAVGSTHLLGAFAGGMAFASVDGARRVWERDASAVAAWTHSIFF-LAVGFHVPLTDMFVPLKG---FGLGVGYAVPAIVGKLVTGFIVGADVRKA--FVVGWAMVGRGELGFVMAGSAFRNGLLDSTAYVASVWALLVATLVSPIQMRAAL 394
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: F2U6B9_SALR5 (Na_H_Exchanger domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6B9_SALR5) HSP 1 Score: 152 bits (384), Expect = 9.490e-35 Identity = 137/494 (27.73%), Postives = 231/494 (46.76%), Query Frame = 3
Query: 219 SAVWAIERCCMYVNASPIIGQILAGLIVGPALLDLIPFVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDS--------------------------------------EVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVPSIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGS-PLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRALMVDRRAEEAETV 1583
+ VW R ++A ++G+ILAG+++ ++ +P ++ +LG++G++ LV+E G++++V + R+G+RA + A TG +LP L+ +A + + E++A GA+LS TS+G ++++L +G+L+T +G+LI AA+IDDVLSL++LA ++ L ++ + Y+ PV+ S +L+G I LVQ+ P + A + + + G LLL VL ++L + G+S LLG F G+A + +PGV W ++ + + +FF+ S+ I L P L G++ T+ A+LGKL GVFAG+ P VGWAM GRGE F +A+ A D++ ++ F A V ALLL ++++P+ RRAL R +A TV
Sbjct: 16 AVVWGCGRLFSLIHAQ-LVGEILAGILLSQDVIGWLPPMDLIVILGQVGLIFLVLEGGMSINVHLLPRIGLRAVLVAVTGTLLPVLLGWA-FMTITGKGRIESIAAGAALSSTSIGMASKMLQSMGQLNTTLGNLIAVAAMIDDVLSLVILAVLQRLGSDNGGDAXXXXXXXXXXXXXXXXXXXXXXXTSIAGVSTSNGDSAWVYLEPVVVSCAFVLIGAI---------------------------------------LVQAVPR------------IERAVPWRQEEHRKQG-------------------LLLAVLLITLGLVTAAGYTGTSYLLGAFTAGMAFADVPGVLDYWL-ELSPVSDMLSSIFFA-----SIGLIVPVNTLFKPIPLGYGVLYTIPAILGKLVTGVFAGALPKAQV----VGWAMVGRGELGFLMAQEALEEDLVGSDTFIASVWALLLCTLLSPLAMRRALDKLERTADAYTV 427
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Match: A0A7S1B6J4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6J4_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.520e-34 Identity = 141/526 (26.81%), Postives = 248/526 (47.15%), Query Frame = 3
Query: 207 VLLLSAVWAIERCCMYVNASPIIGQILAGLIVGPALLDLIPFVEAFRLLGKLGVMILVIESGLAVDVADIRRLGIRASVAAATGVVLPTLISFALYAGVLRASWKEALAVGASLSPTSLGFSAQLLGEVGELSTPMGHLICTAAVIDDVLSLLLLAEVEALEGEDSEVFSYVLPVLASAGSILVGGIVTVVVSSKTEELDSLLKSLNDPARRRYSSGSTPNPLRSELVQSKPADTDASRQSDTMLTDGAFEAGENIYSQPGASNVPSTGAIGAVGLGDRLLLLMVLALSLLFAYCSALVGSSDLLGCFLGGVALSGIPGVQRVWARQMGRFTQWGARLFFSTTVAFSVP-SIYKDGGLLGPASLWKGLMLTVAAVLGKLAVGVFAGS--------PLTMAGFLKVGWAMNGRGEFSFFIAESANRRDILTAENFSAVVLALLLSSVMAPIGFRRAL-----MVDRRAEEAETVATFNGVSSGGSSRWTAGEVEGVDMTRRADGEGVTAGQS*PRELRFIRVRTHTN 1742
V+ ++A+ A + + ++G+I+ G+++GP L + + EAF +LG++G+++LV+E G+ +DV ++ +G R A G VLP +I + A + K A+A GA+ PTSLG + +L ++TP+G LI AA+IDD++++++L+++ AL GE + V S V+P++++ ++VGG + V PN L V SK AD + S T++ +V+ L Y A S L+GCF+ G+ + QM R QW ++FF+ T+ F VP + DG ++G G + T+A +LGKL G+ + L M L VG++M GEF+F IA A I+ + ++++VLA+LLS+++AP R + + +++ ++AE + T +S EVE + T+ D + F+ ++TH++
Sbjct: 53 VVFITAILAAGKFAAAIKMPSLVGEIIVGIVLGPNLFNFVWNPEAFHMLGEIGLLLLVVEVGIDIDVTTLKLIGARGISIAIVGSVLPIVIGIGV-AFAIGTDTKGAIAAGAAFGPTSLGIAINILKGAKIVNTPLGQLIIAAAIIDDMIAIVILSQLGALTGEVT-VKSIVIPIVSAFLFLIVGGYIAVF--------------------------QLPNVL-DRFVFSKVADKNKGNASLTVM------------------------------------FALVVGLMPATKYSKA----SPLMGCFIAGLVFCSNHAAHHHFVSQMKRLLQWLMKIFFAATIGFQVPVKSFADGRVIG-----NGCLFTLA-LLGKLFTGLMVPNFTPNKRYTGLHMRDVLVVGFSMAAEGEFAFIIAVFAVTEGIIGEKLYASIVLAILLSTILAPFALRLTIAKYNKVTEKKIKDAEEMETKRMLS----------EVEDDEETKNLDKLTI-----------FLCIQTHSD 482 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig954.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig954.24.2 >prot_A-nodosum_M_contig954.24.2 ID=prot_A-nodosum_M_contig954.24.2|Name=mRNA_A-nodosum_M_contig954.24.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=507bp MALENELLVVLLLSAVWAIERCCMYVNASPIIGQILAGLIVGPALLDLIPback to top mRNA from alignment at A-nodosum_M_contig954:184107..198925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig954.24.2 ID=mRNA_A-nodosum_M_contig954.24.2|Name=mRNA_A-nodosum_M_contig954.24.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=14819bp|location=Sequence derived from alignment at A-nodosum_M_contig954:184107..198925+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig954:184107..198925+ >mRNA_A-nodosum_M_contig954.24.2 ID=mRNA_A-nodosum_M_contig954.24.2|Name=mRNA_A-nodosum_M_contig954.24.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1521bp|location=Sequence derived from alignment at A-nodosum_M_contig954:184107..198925+ (Ascophyllum nodosum dioecious)back to top |