mRNA_A-nodosum_M_contig954.14.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: D7FVN2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN2_ECTSI) HSP 1 Score: 261 bits (667), Expect = 2.450e-82 Identity = 138/217 (63.59%), Postives = 172/217 (79.26%), Query Frame = 2
Query: 272 KLEKEAAK--GGLSKTVVRETQKEADALAEALLKKCKADKLNLSEIDADISNLQSRADALRPSQSVDLAKDWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKSLSFRYTSMIDGTGKATSSAK-GDMDRLVDVEVAFVGQGALVLETKGSDSK-PGRLVFAKEPDLDAELATLRV 910
K+EK+A K G++K V RETQKEAD +AE LLK C K +L++I A+I++L+SR AL+P+QS +L KDWR+VFASDDDA++ VGTGLH+LPLTRM DFF+TL GG+ +R + IEVLRV+GPFPN+RNTLSG CKS G SL+ RYTSMIDGTGK T ++ G+ DR+VDV+VAFVGQG LVLE+ + SK P LVFAKEPDL+ ELA LRV
Sbjct: 29 KMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFITLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGGCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAKEPDLEGELAKLRV 245
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A835YNB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB0_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.210e-42 Identity = 85/193 (44.04%), Postives = 118/193 (61.14%), Query Frame = 2
Query: 332 KEADALAEALLKKCKADKLNLSEIDADISNLQSRADALRPSQSVDLAKDWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETKGSDSKPGRLVFAKEPDLDAELATLRV 910
K+ D LA LL C + + + I A +L S+A ++P+QS +L+KDWR+V+ S D L A+G+GLH+LPLTRM D F++ +G R + EVLRV+GPFPN++N LSG KS+G L YTSMIDGTGK +S MD V +EV FVG +V + + +V+ +E DL+ L LRV
Sbjct: 74 KKLDELAAQLLNLCTTNARDTAAIQAQARDLGSKA--VKPAQSAELSKDWRLVYVSSGDVLGALGSGLHKLPLTRMEDQFVSFAGSRGLGREITTTEVLRVIGPFPNVKNVLSGTYKSMGTSELLINYTSMIDGTGKEITSGNAAMDGNVSIEVVFVGSDIMVTAPRDASGARQVMVYQREEDLEGALKRLRV 264
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S2UVC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC0_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.070e-41 Identity = 88/214 (41.12%), Postives = 126/214 (58.88%), Query Frame = 2
Query: 272 KLEKEAAKGGLSKTVVRET-QKEADALAEALLKKCKADKLNLSEIDADISNLQSRADALRPSQSVDLAKDWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETKGSDSKPGRLVFAKEPDLDAELATLRV 910
K +K + G KT+ ++ ++EA +A+ LL+ C A+K + +I + + L+ D++ P+QS +L DW +VF +D DAL VGTGL +LPLT+M FL+ G R + E+LR+LGPFPN++N LSG K+ G +SLS +Y MIDGTGK S DR + + V FVG+ ALV S +V +E DLD L LRV
Sbjct: 58 KKKKSRSNGTEEKTLKKKNVEQEAGIVADGLLELCTAEKRDTEKISSVVEELKKYTDSIMPAQSSNLRGDWEVVFVTDADALDHVGTGLRKLPLTKMEAMFLSFDGSRSVGRSIEASEILRILGPFPNVKNKLSGTYKAQGARSLSIKYDLMIDGTGKEVKSGSATTDRSISINVEFVGEKALVATIPSSQHI---MVLKREVDLDEALRKLRV 268
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S3YGC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGC3_HETAK) HSP 1 Score: 124 bits (311), Expect = 8.020e-31 Identity = 72/148 (48.65%), Postives = 89/148 (60.14%), Query Frame = 2
Query: 476 DWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCK-SVGPKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETKGSDSKPGRLVFAKEPDLDAELATLRVQE 916
DWR+ + S L +GTGLH+LPLTRM D FL+ SG A R EVLRVLGPFPN+RN LSGD S +S +YT MIDGTGK S G MDR +++V + G LV+ TK + LVF +E +L A L LRV +
Sbjct: 1 DWRLAYVSAAAGLDEIGTGLHKLPLTRMEDLFLSFSGSKAAGRAAACTEVLRVLGPFPNLRNKLSGDFGISSSGTGISLKYTQMIDGTGKMLESGNG-MDRKNNLQVIYSGLDGLVMLTKTGCA----LVFQRETNLQAALKALRVDD 143
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S2A8V2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8V2_TRICV) HSP 1 Score: 119 bits (299), Expect = 4.480e-27 Identity = 85/227 (37.44%), Postives = 119/227 (52.42%), Query Frame = 2
Query: 284 EAAKGGLSKTVVRETQKEADALAEALLKKCKADKLN--LSEIDADISNLQSRADALRPSQSVDLAKDWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKS---LSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVL----ETKGSD---------SKPGRLVFAKEPDLDAELATLRV 910
E+A+ L +T V E ++ D + KK K L LS I I+N A +R +D+RM +A D+A+ VGTGLH++PL R+ + F T +R+ +IEV+R+LGPFPN+RNTL GD SVG + L Y SM+DGTGK + D R V ++V F + A+V E +G+D S L+F KE LD +L LRV
Sbjct: 112 ESARRSLIRTAVSELEEALDPKDDEAKKKAKGRDLEYVLSRIRTLIANPSPDAGGMRALAQGQKMRDYRMAWAGSDEAVCHVGTGLHKVPLARLQEVF-----ATFGKKRVEIIEVIRILGPFPNVRNTLKGDT-SVGRGNDVRLDITYDSMVDGTGKEVLAGTEDNIRRVALQVLFADEEAIVCAMPAEEEGADEGEDDPLGNSGSRILLFVKEDQLDGKLDVLRV 332
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S2KRS1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRS1_9STRA) HSP 1 Score: 115 bits (287), Expect = 8.970e-27 Identity = 69/158 (43.67%), Postives = 96/158 (60.76%), Query Frame = 2
Query: 476 DWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCK-SVG--PKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETK----------GSDSKPGRLVFAKEPDLDAELATLRV 910
D++MV+A D A+ VGTGLH++PL R+ + FL+ + +R+ + EV+R+LGPFPN++N L G+ K SVG L+F Y+SMIDGTGK S+A G R VD++V + A+V T SD+ LVF +E DLD EL LRV
Sbjct: 38 DYKMVWAGSDAAVCHVGTGLHKVPLARLQEVFLS-----IGKKRVEINEVIRILGPFPNVKNMLQGNVKVSVGGGESVLTFTYSSMIDGTGKELSAA-GSEQRKVDLKVLYAADQAIVCTTSIDDDGAVDYFESDNGASLLVFFREKDLDGELDALRV 189
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S2XKB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKB3_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.280e-24 Identity = 61/157 (38.85%), Postives = 86/157 (54.78%), Query Frame = 2
Query: 476 DWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETKGSDSKP------------GRLVFAKEPDLDAELATLRV 910
D+RM + DDA+ VGTGLH++PL R+ D F+T V R+ V EV+R+LGPFPN+RNTLSGD ++ L F Y M+DG GK + D R + + + F A+V D+K L+F +EP+L+ +L LRV
Sbjct: 187 DYRMAWVGSDDAVCHVGTGLHKVPLARLQDVFMT-----VGKNRVEVFEVIRILGPFPNVRNTLSGDV-AMSKGQLQFSYDMMMDGLGKQLEAGTDDNVRKLKLNILFADSNAIVATVPNKDAKATDVDDIMGENGANVLLFVREPELETKLEILRV 337
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S2SLA9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SLA9_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.890e-23 Identity = 68/181 (37.57%), Postives = 96/181 (53.04%), Query Frame = 2
Query: 425 QSRADALRPSQSVDLAKDWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETKGS-------------------DSKPGRLVFAKEPDLDAELATLRV 910
Q + + + Q + A +R+ + D+A+ +GTGL ++PL R+ + FL S + +R+ V+EVLR+LGPFPNIRNTL GD S +LSF Y SMIDGTGK + + VD++V F + ALVL ++ L F K+ DLD ELA LRV
Sbjct: 218 QQKDNNMSMRQFIASADAFRLTWVGSDNAVTHIGTGLQKVPLARLEEVFLRFS---MKGKRIEVLEVLRILGPFPNIRNTLVGDVSSRNKDNLSFSYNSMIDGTGKEILAGTESKKKKVDLQVLFADKNALVLLXXXXXXXXXXNVTVAINDDYIFRNNGENILFFTKQADLDEELAKLRV 395
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A448YZF2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZF2_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.330e-22 Identity = 64/159 (40.25%), Postives = 94/159 (59.12%), Query Frame = 2
Query: 476 DWRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCK----SVGPKSLSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALV--LETKGSDSKP----GR--LVFAKEPDLDAELATLRVQE 916
D+R+ + DDAL VGTGLH++PL RM + F+ G ++ ++EV+ +LGPFPN++N L G K S G + + Y +M DGTGK + D R VD+EVAF + A+V + + +++KP GR L+F +E DLD +L LRV E
Sbjct: 199 DYRLAWVGSDDALCHVGTGLHKVPLARMKEVFMNCLG----KNKIEILEVISILGPFPNVKNVLQGTAKPSSGSAGSE-MQIVYDTMYDGTGKEIMAGTDDNIRRVDLEVAFCDERAIVVVMPDENANAKPLDGDGRRVLLFVREDDLDDKLEGLRVNE 352
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Match: A0A7S1D965_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D965_CYCTE) HSP 1 Score: 105 bits (262), Expect = 1.680e-22 Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 2
Query: 479 WRMVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVLGPFPNIRNTLSGDCKSVGPKS----LSFRYTSMIDGTGKATSSAKGDMDRLVDVEVAFVGQGALVLETKGSD----SKP----GR--LVFAKEPDLDAELATLRV 910
+R+ + D+A+ +GT H++PL RM + FL L G R+ V EV+ +LGPFPNIRNTL G C++V KS Y SMIDGTGK + K + R VD++V A+V D S P G+ LVF +E DLD +L LRV
Sbjct: 105 YRLAWVGSDEAICHIGTSQHKVPLARMQEVFLLLQG----RNRLEVYEVISLLGPFPNIRNTLQGSCQTVNNKSGGGVWKITYDSMIDGTGKELLAGKEENVRWVDLQVCCADSNAIVAVVPNEDGSLRSNPLEDNGKHALVFVREDDLDTKLDKLRV 258 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig954.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig954.14.2 >prot_A-nodosum_M_contig954.14.2 ID=prot_A-nodosum_M_contig954.14.2|Name=mRNA_A-nodosum_M_contig954.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp MVFASDDDALAAVGTGLHRLPLTRMLDFFLTLSGGTVASRRMRVIEVLRVback to top mRNA from alignment at A-nodosum_M_contig954:97186..102958+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig954.14.2 ID=mRNA_A-nodosum_M_contig954.14.2|Name=mRNA_A-nodosum_M_contig954.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5773bp|location=Sequence derived from alignment at A-nodosum_M_contig954:97186..102958+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig954:97186..102958+ >mRNA_A-nodosum_M_contig954.14.2 ID=mRNA_A-nodosum_M_contig954.14.2|Name=mRNA_A-nodosum_M_contig954.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=435bp|location=Sequence derived from alignment at A-nodosum_M_contig954:97186..102958+ (Ascophyllum nodosum dioecious)back to top |