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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1456 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 768 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870450.3511033-UTR-A-nodosum_M_contig950:230563..231100 | 1680870450.3511033-UTR-A-nodosum_M_contig950:230563..231100 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig950 230564..231100 - |
| 1680870450.3646905-UTR-A-nodosum_M_contig950:231711..231715 | 1680870450.3646905-UTR-A-nodosum_M_contig950:231711..231715 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig950 231712..231715 - |
| 1680870450.3918562-UTR-A-nodosum_M_contig950:232483..232630 | 1680870450.3918562-UTR-A-nodosum_M_contig950:232483..232630 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig950 232484..232630 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870450.3778255-CDS-A-nodosum_M_contig950:231715..232483 | 1680870450.3778255-CDS-A-nodosum_M_contig950:231715..232483 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig950 231716..232483 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig950.5.2 >prot_A-nodosum_M_contig950.5.2 ID=prot_A-nodosum_M_contig950.5.2|Name=mRNA_A-nodosum_M_contig950.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=256bp
MVDVKNRKCRTEGCGKGPSYGVAGTKISEYCAQHAPDGMVDVKNRKCRTE
GCDKWPLYGVAGTKFAEYCVQHAADGMVDVKSRKCRTEGCDKWPSYGVKG
KKTAEYCAQHAPDGMVDVKGRKCKTKGCGRKTSFGVANTRTVEYCAQHAR
LKCGVEGYEEEEGGLHHSGKETIGNILPDGAKHQTVHHPATTSHRSESSQ
GSRKRVRYPEITSTTSMRPIARESAGGAGSMPDIDGQKSPGKQDASVKAG
MQLSL* back to topmRNA from alignment at A-nodosum_M_contig950:230564..232630- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig950.5.2 ID=mRNA_A-nodosum_M_contig950.5.2|Name=mRNA_A-nodosum_M_contig950.5.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2067bp|location=Sequence derived from alignment at A-nodosum_M_contig950:230564..232630- (Ascophyllum nodosum dioecious)
TGCGGAGTACTGTGCACAGCACGCACCGGACGGGATGGTCAACGTCAAGA
ACAGAAAGTGCAAAACCCAAGGCTGCGGCAAGCAGCCGTGGTTCAAGTTG
CAGGTACGAAAACTGTGGAGTACTGTGCACAGCACGCACCGGACGGGATG
GTCGATGTCAAGAACAGGAAGTGCAGGACCGAAGGCTGCGGAAAGGGGCC
GTCGTATGGAGTGGCAGGCACGAAAATTTCGGAGTACTGTGCTCAGCACG
CACCGGACGGGATGGTCGATGTTAAGAACAGAAAGTGCAGAACCGAAGGC
TGCGACAAATGGCCGTTGTATGGAGTGGCAGGTACGAAATTTGCAGAGTA
CTGTGTTCAGCACGCAGCGGACGGGATGGTCGACGTCAAGAGCAGAAAGT
GCAGAACCGAAGGCTGCGACAAGTGGCCGTCGTATGGAGTTAAAGGTAAG
AAAACGGCGGAATACTGTGCACAGCACGCACCGGACGGGATGGTCGACGT
CAAGGGAAGAAAGTGCAAAACTAAAGGCTGCGGCAGGAAAACGTCTTTTG
GAGTGGCCAACACAAGAACGGTTGAATACTGTGCACAGCACGCCAGACTA
AAATGCGGTGTCGAGGGATACGAGGAGGAAGAGGGTGGCCTACATCATTC
CGGGAAGGAAACCATTGGTAACATACTTCCGGACGGCGCTAAACATCAAA
CCGTTCATCATCCTGCCACCACAAGCCATCGGTCGGAAAGTAGCCAGGGC
TCTCGTAAGCGAGTACGTTACCCAGAAATTACATCTACGACCTCGATGCG
ACCTATCGCACGAGAATCCGCTGGAGGGGCGGGGAGTATGCCGGATATTG
ACGGGCAAAAATCTCCCGGCAAACAGGATGCTTCTGTGAAGGCGGGGATG
CAGCTCTCCTTGTAGCCAGGTACACTATACGTGACCTCAATCTCTATCTG
CTTGATGTCAGTTTTTATATCCTTGCTCGTGTAGTCCGCTGTATAATAGA
ACTGTCATTTTTGCGTAGGTTGCTGATGAGGATGTTTTTCTGGCCCTACG
CCGTATCATGTGGTCGTTTTTTTCTTTTTTTTTTCTTGTATTTTTGTTTC
ATGTTTATTTTTAATTTGTGTCCCTTCCTGGCGACGATGTCATTTGCTGG
CGACGATTTCCTTTCCCTGCTTTTTTTCTCCGAATATGCTATGTTCCTGG
TTTGATTTGGTTCGGTTTGCTTCTGCCTATCTTGTGACCATGGCTGGATT
CGTAGGGGATCAGTCAATGTGAGATACAACAACAGCTGTAGTACTACGAT
TCTGGCTACTGTAGCTCAACCGTTGGCTTTTCCTTTGTTCAGATAGAATG
GGTACCCTGTCTCGTTCACGAACCTCGCGCTGTGTTTCGTCGCAAAGATG
TTAGTTCAGCTCAACCTGTTCCTCTTGGACCCTCAATACCTTGCAGCTCC
CTCCACAGCAATCACGAAACACGTCACCAGTGCTTACCCCCAAGGCCTTG
TTTTCCCGTTCCCTCGTCTTTCGGACTCAGGTACTGCGATGAAGAGCGTG
GTGATGATATACAGTCGCCGAGATGTCGATGAGTTTGGTAAGGGTCGTCC
TACCGTGCGTACCTCCGAAAGTTTTTTTTTCAAATTATATTATATGCATA
AACGCTGTTTCATCCTTAAAATGCCGGTACAGTACTTTAAAAGTACCGAC
AAAGAAGTACGGGGGTAGGCAGCACCGGACCTGAGGAAGATGCTACGGAG
GATATCCTCCTGAACTCTTTGGCTACCCCGATTCCGATTCCGAGGGAGGC
GAGCGTTTGAGTTTGGTCAAGTTGTCGTCACGAATCTGTACTTGTCTGAA
CATTTGTCAGCAGGCAACTATACTGTATGAAGTTCAGCTACGAATTAGGC
TCACATTGAATGGATAGAGGTGATCTATGGGGTGATGAAATGATTTCGCG
ATAGGGGCTGAATTTATTACAATTTAATTTGACCTTCTGACTCGATACTA
AATCGGAGCTAATGTTGACTGTGACTGAAGCTTCCCGAAGCACACTCGAA
GAAGTCCCAATAGTGCG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig950:230564..232630- >mRNA_A-nodosum_M_contig950.5.2 ID=mRNA_A-nodosum_M_contig950.5.2|Name=mRNA_A-nodosum_M_contig950.5.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at A-nodosum_M_contig950:230564..232630- (Ascophyllum nodosum dioecious)
ATGGTCGATGTCAAGAACAGGAAGTGCAGGACCGAAGGCTGCGGAAAGGG
GCCGTCGTATGGAGTGGCAGGCACGAAAATTTCGGAGTACTGTGCTCAGC
ACGCACCGGACGGGATGGTCGATGTTAAGAACAGAAAGTGCAGAACCGAA
GGCTGCGACAAATGGCCGTTGTATGGAGTGGCAGGTACGAAATTTGCAGA
GTACTGTGTTCAGCACGCAGCGGACGGGATGGTCGACGTCAAGAGCAGAA
AGTGCAGAACCGAAGGCTGCGACAAGTGGCCGTCGTATGGAGTTAAAGGT
AAGAAAACGGCGGAATACTGTGCACAGCACGCACCGGACGGGATGGTCGA
CGTCAAGGGAAGAAAGTGCAAAACTAAAGGCTGCGGCAGGAAAACGTCTT
TTGGAGTGGCCAACACAAGAACGGTTGAATACTGTGCACAGCACGCCAGA
CTAAAATGCGGTGTCGAGGGATACGAGGAGGAAGAGGGTGGCCTACATCA
TTCCGGGAAGGAAACCATTGGTAACATACTTCCGGACGGCGCTAAACATC
AAACCGTTCATCATCCTGCCACCACAAGCCATCGGTCGGAAAGTAGCCAG
GGCTCTCGTAAGCGAGTACGTTACCCAGAAATTACATCTACGACCTCGAT
GCGACCTATCGCACGAGAATCCGCTGGAGGGGCGGGGAGTATGCCGGATA
TTGACGGGCAAAAATCTCCCGGCAAACAGGATGCTTCTGTGAAGGCGGGG
ATGCAGCTCTCCTTGTAG back to top
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