mRNA_A-nodosum_M_contig947.17.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig947.17.1
Unique NamemRNA_A-nodosum_M_contig947.17.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: D7FVV6_ECTSI (Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV6_ECTSI)

HSP 1 Score: 494 bits (1273), Expect = 7.320e-175
Identity = 260/274 (94.89%), Postives = 271/274 (98.91%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLGGVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGNGSNMLLGLNTS 936
            MAEKLLQNVSRLGGVVAIAAAT+MCLFNVDGGQRAVIFDRFQGVK+ VVGEGTHFMIP++QKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRE+VSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLA+IIRAEGEAEAAELISAALKESG+GLIEVRRIDTAK+IALTLA SRN+TYLP+G GSNMLLGLNT+
Sbjct:    1 MAEKLLQNVSRLGGVVAIAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA 274
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A835Z1F2_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F2_9STRA)

HSP 1 Score: 371 bits (953), Expect = 3.760e-126
Identity = 201/275 (73.09%), Postives = 235/275 (85.45%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLGGVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGNG-SNMLLGLNTS 936
            MA++LL   +R+G +VA AAA D+CL+ VDGG+RAVIFDR  GVK  VVGEGTHF+IP +Q PII+DVR R R INS+TGTKDLQ ANISLRVLSRP E++L  I+++LG D+DDRVLPSLGNEVLKAVVAKYNAEELLSKRE VS ++R+E+  RAKQF+LI+DDVSITHLTFG EFTKAIENKQVAQQEAERQVY+V  S+QER A++IRAEGEAEAA+LIS ALK SG GLIEVRRID AK+IA TLAN R VTYLP+G G +NMLL ++ S
Sbjct:    1 MADRLLSAATRVGVLVAGAAAVDLCLYTVDGGERAVIFDRLAGVKDDVVGEGTHFLIPGLQTPIIMDVRDRARVINSVTGTKDLQTANISLRVLSRPDEAKLALIFKQLGQDYDDRVLPSLGNEVLKAVVAKYNAEELLSKRETVSHQVREEIMARAKQFNLILDDVSITHLTFGREFTKAIENKQVAQQEAERQVYLVQKSEQERQAAVIRAEGEAEAADLISNALKSSGSGLIEVRRIDAAKEIAETLANGRGVTYLPAGQGGANMLLSVDPS 275
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A7S0T017_9STRA (Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T017_9STRA)

HSP 1 Score: 342 bits (877), Expect = 1.300e-114
Identity = 185/272 (68.01%), Postives = 217/272 (79.78%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLGGVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSG-NGSNMLLGL 927
            MAE+L      LG  V I    D C+++VD G RAVIFD+ +G++  VVGEGTHF IP+IQ PII+D+R+RPR INS TGTKDLQM NISLRVLSRP ES+LP IY+ LG DFDDR+LPSLGNEVLKAVVA+YNAEELLSKR  VS +IR EL  RA +F+LI+DDVSITHLTFG EF KAIE+KQVAQQEAE Q Y+VA +DQER A+II AEGEAEAA +IS A+  +G GL+EVRRID AK++A TLA  RNV YLP+G +GSN LL L
Sbjct:    1 MAERLTSLTKYLGSAVFIFGIIDQCIYDVDAGTRAVIFDKVRGIQDKVVGEGTHFKIPIIQDPIIMDIRSRPRIINSSTGTKDLQMVNISLRVLSRPNESKLPLIYKTLGIDFDDRILPSLGNEVLKAVVAQYNAEELLSKRAHVSLQIRTELLERASKFNLILDDVSITHLTFGTEFAKAIEHKQVAQQEAETQAYLVAKADQERKAAIILAEGEAEAANMISKAMSAAGNGLVEVRRIDAAKEVAGTLAKGRNVIYLPNGKDGSNFLLSL 272
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A7S4EFZ4_9STRA (Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFZ4_9STRA)

HSP 1 Score: 336 bits (862), Expect = 3.120e-112
Identity = 181/280 (64.64%), Postives = 225/280 (80.36%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLGGVVAIAAAT-DMCLFNVDGGQRAVIFDRFQG-VKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPS-------GNGSNMLLGL 927
            MA++ L+ + RL GV ++ A T + C++NVDGGQRAV+FD+ +G +   V GEGTHF+IP+IQ+PII D+R +PR I S+TGTKDLQM NI LRVL RP ESELP+IY+ELGTDFD+RVLPS+GNEVLK++VA+YNA ELLSKR  VS RIRDE+T RAK FHL  DDV+ITHLTFG EF  AIE+KQVA QEAERQ +VV  ++QER A + RAEGEAEAA +I+ A++++G G+IEVRRID AK+IA  LANSRNV YLP+       G+GSN+LLGL
Sbjct:    1 MAQQALKGLGRLAGVASVGAFTVNSCIYNVDGGQRAVMFDQLRGGILPDVSGEGTHFLIPMIQRPIIFDIRTKPREIPSVTGTKDLQMVNIKLRVLWRPTESELPQIYRELGTDFDERVLPSIGNEVLKSIVAQYNAVELLSKRAEVSERIRDEMTKRAKTFHLEFDDVAITHLTFGREFMTAIESKQVASQEAERQQWVVKKAEQERQAMVTRAEGEAEAATIITQAMEKTGNGIIEVRRIDAAKEIAGKLANSRNVVYLPNTGGSGGNGSGSNLLLGL 280
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: F0Y523_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y523_AURAN)

HSP 1 Score: 335 bits (860), Expect = 5.470e-112
Identity = 182/275 (66.18%), Postives = 218/275 (79.27%), Query Frame = 1 
Query:  121 EKLLQNVSRLG-GVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGN---GSNMLLGLNT 933
            EK+L  V+RLG GV  ++     CL+NV+GG RAV+FD  +GV    + EGT F IPV+Q PII+D+R+RPR I S+TGTKDLQM NI LRVLSRP E  LP+IY  LGT+FDDRVLPSLGNEVLK+VVA+YNA++LLS RE +S +IR  LT RA+ F+LI+DDVSITHL FG EFT AIE KQVAQQEAERQ YVVA ++QE+ A+IIRAEGEAEAA  IS AL++ G GLIEVRRID A+++A TL+ +R VTYLPSG    GSNMLLGLNT
Sbjct:    2 EKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGLNT 276
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A7S2XWM3_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM3_9STRA)

HSP 1 Score: 333 bits (853), Expect = 5.690e-111
Identity = 181/275 (65.82%), Postives = 218/275 (79.27%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLG-GVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGNGS--NMLLGLN 930
            MAE++L  ++++G    A       CL  VDGGQRAVIFD+F+G+     GEG HF+IP+IQ+P I+D+RARPR INS+TGTKDLQM NISLRVLSRP E ++  I++ LGTDFD+RVLPSLGNEVLKA+VA+YNAE+LL KR+ VS +IR+ L  RA  F+LI+DDVSITHLTFG E+ KAIE+KQVAQQEAERQ YVVA +DQER A+IIRAEGEAEAA LIS AL  SG GLIEVRRID A+++A  LA +R VTYLP G G   N+LLGLN
Sbjct:    1 MAERVLGLLTKIGLAATAGGVVVKFCLVTVDGGQRAVIFDKFKGILPDSCGEGMHFLIPIIQEPHILDIRARPRVINSVTGTKDLQMVNISLRVLSRPEEDKISHIFRTLGTDFDERVLPSLGNEVLKAIVAQYNAEDLLRKRDEVSEKIREALRKRAGAFNLILDDVSITHLTFGREYAKAIESKQVAQQEAERQQYVVAKADQERKAAIIRAEGEAEAATLISKALAGSGSGLIEVRRIDAAREVAENLAAARGVTYLPGGQGGGQNILLGLN 275
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A7S3M2D1_9STRA (Prohibitin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2D1_9STRA)

HSP 1 Score: 331 bits (848), Expect = 3.380e-110
Identity = 177/257 (68.87%), Postives = 210/257 (81.71%), Query Frame = 1 
Query:  160 VAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGNG-SNMLLGL 927
            V    A +   ++VD G RAVIFD+ QG+++ V GEGTHF IP IQ PII+D+R+RPR+I+S+TGTKDLQM NISLRVLSRP E +L  IYQ LGTDFDDRVLPSLGNEVLK+VVA+YNAEELLSKR  VS  IR+ L  RA +F+LI+DDVSITHLTFG EF +AIE+KQVAQQEAE Q YVVA +DQER A++IRAEGEAEAA LIS A+ ++G GLIEVRRIDTAKD+A  ++ SRN+TYLPS  G SNMLL +
Sbjct:   16 VVTGIAIEFFTYDVDAGNRAVIFDKIQGIQQTVKGEGTHFKIPFIQVPIIMDIRSRPRSIHSVTGTKDLQMVNISLRVLSRPKEDQLATIYQTLGTDFDDRVLPSLGNEVLKSVVAQYNAEELLSKRALVSHGIREALVERAAKFNLILDDVSITHLTFGKEFARAIEHKQVAQQEAETQAYVVAKADQERKAAVIRAEGEAEAANLISEAMLKAGNGLIEVRRIDTAKDVAQIVSRSRNITYLPSSKGGSNMLLNV 272
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A1Z5JUT9_FISSO (Prohibitin n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUT9_FISSO)

HSP 1 Score: 329 bits (844), Expect = 1.510e-109
Identity = 173/279 (62.01%), Postives = 220/279 (78.85%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLGGVVAIAAAT-DMCLFNVDGGQRAVIFDRFQG-VKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGNG----SNMLLGLNT 933
            MAE  L  + RL GV+A+   T   C++NVDGG+RAV+FD  +G ++  V GEGTHFMIPV+Q+PI++DVR +PR I SITGTKDLQM NI LRVL RP+  ELP +Y+ELGTDFD+RVLPS+GNEVLK++VA+YNAEELLSKR  VS RI++ +T RA+ FHL +DDV+ITHLTFG EF KAIE KQVA QEAERQ +VV  ++QER+A + RAEGEAEAA +I+ A++++G  ++EVRRID AK+IA  LA SRN+ YLP G G    SN+LL ++T
Sbjct:    1 MAEAALNRLGRLSGVLAVGTFTVSQCIYNVDGGERAVLFDTLRGGIRSDVRGEGTHFMIPVVQRPIVMDVRTKPREIPSITGTKDLQMVNIKLRVLWRPIVEELPALYRELGTDFDERVLPSIGNEVLKSIVAQYNAEELLSKRAEVSNRIKEAMTKRARHFHLTLDDVAITHLTFGREFMKAIEMKQVASQEAERQQWVVKKAEQERIAVVTRAEGEAEAASIITKAMEKTGNAIVEVRRIDAAKEIAGKLAQSRNIVYLPGGGGESGGSNLLLSVDT 279
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: B7G8K0_PHATC (Prohibitin n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8K0_PHATC)

HSP 1 Score: 328 bits (841), Expect = 4.940e-109
Identity = 174/283 (61.48%), Postives = 221/283 (78.09%), Query Frame = 1 
Query:  115 MAEKLLQNVSRLGGVVAIAAAT-DMCLFNVDGGQRAVIFDRFQG-VKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLP--------SGNGSNMLLGLNT 933
            MAE +L  + R  GV+A+   T   CLFNVDGG+RAV+FD  +G +   +  EGTHF++P+IQ+P+I+D+R + R + S+TGTKDLQM NI LRVL RP+E ELP +Y+ELGTDFD+RVLPS+GNEVLK+VVA+YNAEELLSKRE VS RI++E+  RAK FHL +DDV+ITHLTFG EF KAIE KQVA QEAERQ +VV  ++QER A + RAEGEAE+A +I+ A++++G  +IEVRRID AK+IA  LANSRN+ YLP        SG GSNMLLG++T
Sbjct:    1 MAEAVLNRLGRASGVLAVGTFTVSQCLFNVDGGERAVMFDTLRGGILPDIRKEGTHFLVPIIQRPVIMDIRTKAREVPSVTGTKDLQMVNIKLRVLWRPIEEELPTLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKREEVSERIKNEMMKRAKHFHLTLDDVAITHLTFGREFMKAIEAKQVASQEAERQQWVVKKAEQERQAVVTRAEGEAESARIITKAMEKTGNAIIEVRRIDAAKEIAGKLANSRNIVYLPNTGGGNGSSGGGSNMLLGIDT 283
[Close]
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Match: A0A7S3LRB7_9STRA (Prohibitin n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB7_9STRA)

HSP 1 Score: 326 bits (835), Expect = 3.630e-108
Identity = 169/256 (66.02%), Postives = 208/256 (81.25%), Query Frame = 1 
Query:  154 GVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVGEGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTLANSRNVTYLPSGNGSNMLL 921
            GV  +      CL+NVDGG+RAVIF+RF+GV+   +GEGTH  IP+I  P I D+R++PR IN+ TGTKDLQM NI+LRVLSRP E+ LP+I+Q++G DFD+RVLPS+GNEVLKAVVA+YNA++LL+ RE VS +I D LT RAK FHLI+DDVSITHLTFG +FT A+E KQVA Q+AER  +VV  ++QE+  S+I AEGEAEAA+LISAAL++SG GLIEVRRID +KDIA TLA SRNVTYLPSG G N +L
Sbjct:   19 GVGLVGFVGQECLYNVDGGERAVIFNRFRGVEPKTIGEGTHLRIPMIDYPNIFDIRSKPRIINTTTGTKDLQMVNIALRVLSRPDEAMLPKIFQDIGKDFDERVLPSIGNEVLKAVVAQYNADQLLTMREKVSAQINDTLTQRAKNFHLILDDVSITHLTFGKDFTIAVEAKQVALQDAERSKFVVMKAEQEKKVSVIEAEGEAEAAQLISAALQKSGRGLIEVRRIDASKDIAETLAKSRNVTYLPSGKGGNNML 274
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig947.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV6_ECTSI7.320e-17594.89Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
A0A835Z1F2_9STRA3.760e-12673.09Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S0T017_9STRA1.300e-11468.01Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789... [more]
A0A7S4EFZ4_9STRA3.120e-11264.64Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxI... [more]
F0Y523_AURAN5.470e-11266.18Prohibitin n=1 Tax=Aureococcus anophagefferens Tax... [more]
A0A7S2XWM3_9STRA5.690e-11165.82Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A7S3M2D1_9STRA3.380e-11068.87Prohibitin n=1 Tax=Spumella elongata TaxID=89044 R... [more]
A0A1Z5JUT9_FISSO1.510e-10962.01Prohibitin n=1 Tax=Fistulifera solaris TaxID=15195... [more]
B7G8K0_PHATC4.940e-10961.48Prohibitin n=4 Tax=Phaeodactylum tricornutum TaxID... [more]
A0A7S3LRB7_9STRA3.630e-10866.02Prohibitin n=2 Tax=Aplanochytrium stocchinoi TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig947contigA-nodosum_M_contig947:186844..190467 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVV6
Preferred namePHB
PFAMsBand_7
Model size1018
Max annot lvl2759|Eukaryota
KEGG koko:K09228,ko:K17080
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000122,GO:0000302,GO:0000981,GO:0001067,GO:0001302,GO:0001541,GO:0001552,GO:0001558,GO:0001664,GO:0001666,GO:0001846,GO:0001848,GO:0001850,GO:0001851,GO:0001932,GO:0001933,GO:0001934,GO:0002082,GO:0002673,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002920,GO:0002922,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006139,GO:0006140,GO:0006259,GO:0006325,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006950,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008150,GO:0008152,GO:0008277,GO:0008285,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009505,GO:0009507,GO:0009536,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009723,GO:0009725,GO:0009733,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010944,GO:0010954,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019866,GO:0019867,GO:0019898,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030061,GO:0030154,GO:0030162,GO:0030308,GO:0030312,GO:0030421,GO:0030449,GO:0030518,GO:0030522,GO:0030964,GO:0031090,GO:0031099,GO:0031100,GO:0031224,GO:0031226,GO:0031312,GO:0031315,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031347,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031647,GO:0031871,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033143,GO:0033144,GO:0033554,GO:0033993,GO:0034097,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0035601,GO:0035632,GO:0035902,GO:0036211,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043434,GO:0043467,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045271,GO:0045471,GO:0045745,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045917,GO:0045926,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046483,GO:0046545,GO:0046660,GO:0046677,GO:0048232,GO:0048308,GO:0048311,GO:0048364,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048527,GO:0048528,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050727,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050847,GO:0050896,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051302,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051716,GO:0051782,GO:0055085,GO:0060255,GO:0060259,GO:0060548,GO:0060765,GO:0060766,GO:0061024,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070372,GO:0070373,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070613,GO:0070741,GO:0070838,GO:0070887,GO:0071310,GO:0071345,GO:0071354,GO:0071383,GO:0071396,GO:0071407,GO:0071453,GO:0071456,GO:0071495,GO:0071704,GO:0071731,GO:0071840,GO:0071897,GO:0071944,GO:0072511,GO:0080090,GO:0080134,GO:0090304,GO:0090696,GO:0097159,GO:0097305,GO:0097366,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098732,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0099402,GO:0140110,GO:1900542,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1903317,GO:1903319,GO:1903506,GO:1903507,GO:1903508,GO:1903578,GO:1903998,GO:1990204,GO:2000112,GO:2000113,GO:2000257,GO:2000259,GO:2000322,GO:2000323,GO:2001141
Exons4
Evalue6.71e-177
EggNOG OGsCOG0330@1|root,KOG3083@2759|Eukaryota
Ec32 ortholog descriptionProhibitin complex subunit 1
Ec32 orthologEc-01_002300.1
Descriptionprohibitin
Cds size825
COG categoryO
BRITEko00000,ko03000,ko03029,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig947.17.1prot_A-nodosum_M_contig947.17.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig947 186958..190388 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870445.501751-UTR-A-nodosum_M_contig947:186843..1869571680870445.501751-UTR-A-nodosum_M_contig947:186843..186957Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig947 186844..186957 +
1680870445.7248878-UTR-A-nodosum_M_contig947:190388..1904671680870445.7248878-UTR-A-nodosum_M_contig947:190388..190467Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig947 190389..190467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870445.600688-CDS-A-nodosum_M_contig947:186957..1870221680870445.600688-CDS-A-nodosum_M_contig947:186957..187022Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 186958..187022 +
1680870445.6127787-CDS-A-nodosum_M_contig947:187780..1880871680870445.6127787-CDS-A-nodosum_M_contig947:187780..188087Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 187781..188087 +
1680870445.6239417-CDS-A-nodosum_M_contig947:188949..1891351680870445.6239417-CDS-A-nodosum_M_contig947:188949..189135Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 188950..189135 +
1680870445.6371014-CDS-A-nodosum_M_contig947:190121..1903881680870445.6371014-CDS-A-nodosum_M_contig947:190121..190388Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig947 190122..190388 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig947.17.1

>prot_A-nodosum_M_contig947.17.1 ID=prot_A-nodosum_M_contig947.17.1|Name=mRNA_A-nodosum_M_contig947.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=275bp
MAEKLLQNVSRLGGVVAIAAATDMCLFNVDGGQRAVIFDRFQGVKKMVVG
EGTHFMIPVIQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLES
ELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKREAVSTRIR
DELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVA
LSDQERLASIIRAEGEAEAAELISAALKESGVGLIEVRRIDTAKDIALTL
ANSRNVTYLPSGNGSNMLLGLNTS*
back to top

mRNA from alignment at A-nodosum_M_contig947:186844..190467+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig947.17.1 ID=mRNA_A-nodosum_M_contig947.17.1|Name=mRNA_A-nodosum_M_contig947.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3624bp|location=Sequence derived from alignment at A-nodosum_M_contig947:186844..190467+ (Ascophyllum nodosum dioecious)
CGGAAATCAAACCGGTCACTGAAAATCTACGGCTACCGAGCTCTGCAAGG
CAGCTTCCCCGAGCCGACCTACGTTTCAGGCTTGACTGAAGGTGGCTGAA
GGCAGACAGGAAACATGGCAGAAAAATTGCTCCAAAACGTGTCTCGACTG
GGTGGTGTCGTGGCAATAGCAGCAGCAACGTGAGTTACTTGGTGTGGCGT
TGTTTGCATGTTACTGCGTTTTTCGTGTTCATCCTCTCGGCTTCGTCAGT
CTTGTTCTGGCTACTCGCAGCCTCGCGTTGACTCACACTCATTTCCCAAG
CAAAGGCTCTTGAGAATGGGCTCTACAGCAGTAGTACAGTTTCGCTGGAG
ATCAGGACCAGCCACGCTTTTGGTTGCTTGATTTCTCGAAGAGGTCGTCG
CAATACCGACTGAGCGAGGAAATCATACTCAACTTCTAGTCTAATCAGCC
AGCTCGAGAGCGTCGTGGAAAATACTGCTCTTCCGATGCCATCAACTAAA
GTCAAGTAGACTATCTCTACATACACTCGGTACAAGATACTTCTACTGTA
CAAAGGTATTATCTACCAGGTAGTACAAGTATCAGGGAGAAAGAACGAGG
GCGGCAGTTACTGTTGTACTAATCCGAACCCCATCGAACCAACGGTAAGG
ACTCGTGGAATTTCACTGTAACATATTTAATGGCAAAGGGAGACGTTGAT
TGCGTCAGGGCTAGGCTTGGTGCATCCCATTCCCGCGTCTCGGTCGTACA
GTGAATATATTTGCGAGCGAAATACTTTGTACAACAGACATCAGTATGGG
AGCACGTTGTTCTTACCGCTGAGCTTATCCGGCACACACTCTCTGCAGCG
CCAAGCCTCCCTTGATATTCCCCCTTTTGCACCCGCGAAACCAATCGCAC
GACTTCTCGTTTCATTCAACTCAACTGCGATCGGCAGCGACATGTGCTTG
TTCAACGTGGACGGTGGGCAGCGGGCGGTAATCTTCGATCGATTTCAGGG
CGTCAAGAAGATGGTCGTTGGGGAGGGGACGCACTTTATGATCCCCGTGA
TTCAAAAACCAATCATCATCGACGTACGCGCCAGGCCCCGCACCATCAAT
TCCATCACCGGTACGAAGGACCTCCAGATGGCCAATATATCCCTCAGGGT
GCTTTCCCGCCCGCTAGAGTCGGAGCTGCCCCGCATCTACCAGGAGCTGG
GCACCGATTTCGACGACAGGGTGTTGCCCTCGCTGGGGAACGAGGTCAGC
GCGCACACTGATTTATGTACACCTTCCACTGATTATGCTGCTGCGGATCG
TACCGGATCGCGAGACCCGGCGGTGTGCCGGCCATATCTATAGCTCTATG
CTTTACCTACCACAGTACGCTAAACTCGCGCACGCGCCATGTGCTCCGTG
TTTTGCGTCTTGAGATTTGGCGTGAGTTAGCTTCATTGTTGACAAAAGAC
CTGAACTCCAAGACTTGCGTAGCGTTGAGTGCTGCATGAATCACGAACGC
ACTACTTTATTGTTTGAAGGTGCCGCCGTATCAGTGGCAGGTATCAAGAC
GTGTCCCCTCATTCGAAGCTTACCGAAGTAACCCTTGGGACTGTATGCCT
CCGGTACTTTCAAAACCGCATATGGCCCACTTCATACCAACAACGGGTGT
GGGAAAAGAGAGTTGCACATCATTTGGTCCATGGTGAAAGCTGAAAAGGC
AGCACCCGTTAGTCGCACTACCTTGAGGACCACTGACCCTGTCCCGACAG
ACTCTCGGCAGTGAATGTCATCGATACGCAATTTCGTGTCCTGATAAAAC
TCGGGACTGACCTGATGGCGGTTGGCGGTATAAATAAATGGACGCCGCCG
CGGAAATCGGGAGGAACCCCGCGAGTAAGCACCAGATTGAGCTTGAGTGT
GGAGAATGAGCAAGCTGGCGCGGGACGGGACGGCCGGACCCCTCTCGCGA
GACTTAATTCTCAGGCGCGAACGGGGACAGGGAAATATTCATTTCCACTG
TTCAGCTCAGCACGAAAGATGACCGAACCATACCCGATTGATCCATACTC
TCCTATACGGTATATATTATGCGATGACTGTACATACATAATACTGTGAC
TCGCAGGTGCTCAAGGCCGTCGTGGCCAAGTACAACGCAGAGGAGCTCCT
CAGCAAGCGTGAGGCGGTCAGCACCCGCATCCGTGACGAGCTCACGCACC
GCGCCAAGCAATTCCACCTCATCATGGACGACGTGTCCATCACCCACCTC
ACCTTTGGCCACGAGTTCACCAAGGCCATCGAGAACAAGCAGGTGTGAGA
GCGTGGAAGCGCGTGAGGTTTGGGTTGAGGCTGCTGATTCATGCGCTGCC
ATGCGAGCCTGAGCAGTAGAACGGGCCCTCGACGGAGTGCCGGGGTGCAG
AGCTTCTGTGGTGGATTCCGTCCTTCTCTCTTTTCGATGGCCCTTGCTAT
TAAGCTATTAATAGTATTCCAAGGCACAGCAGGAGCAGTGCATAGGATAT
CTCTTGCGAGTCGGTCGATATGTATGTATGTATGGTCATCACATATAGCA
GAGTGCGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGA
ACAGGGAAAATAATATTCCCCTGTCTCCGTGCGTGCCTGAGAATTTGGTC
TCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCATCTCCA
TACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCttTTTTTTTTTTT
TTTTAGTATTATTACTATAGGCACCCTGTGGGTCTCTGCATGCATGCGTC
ACACCCGAGGCGTCCTGAACCCGTGCAACTTGTTTAGCTGTGCCACTCCA
AACCCCCCAGTGGATCCCATGGTAGGAGCGCGTGGCTCTCTACGCACCCC
GTAGAAACCCATTTCCTCTCGCCACCTACACTGCTTGTTTATCTTAATCT
GTATCAGGTATATAGATCGAAAATATACTTGATAAAAAAAAATGTTCTAG
ATTTTTGCCTGTTAACGCTAACAGTGTTTATCTGACTTTTCCCGCACTGC
CGGAGATAAACATGACCAGCCCGACCAACTCATGCGCGTAAACGAACACT
AAACCGCGAAAGCCAATCGCGATTGTGCAAGATACAGGATTCGGTGGTAC
CCCCAAAACGCACCATATTGACTCCTCGCGGCTTAGGCAACGTTACAAGC
TGATGCGAGCCACGATAGAAACATTGAATCGTTTTCGACCTAATGCCTCC
TACCCCGTCTGCATCCCGCCTTTCCAAGGTGGCCCAACAAGAGGCAGAGA
GGCAGGTGTACGTGGTGGCACTCTCCGATCAGGAGCGTCTGGCGTCGATC
ATCCGAGCGGAGGGTGAGGCGGAAGCGGCCGAGCTCATCTCCGCGGCCCT
CAAGGAGAGCGGAGTCGGCCTCATCGAGGTGCGGCGTATTGACACCGCCA
AGGACATCGCCTTGACGCTCGCCAACTCTCGGAACGTGACCTACCTGCCT
TCGGGGAACGGCTCCAACATGCTCCTGGGGCTCAACACTTCGTAAAATAA
AAAGCTTAGCGCCAGGGCTTTTTGGTCTTTCGACTTTCGCTTACTTTAGT
TCAAAGGATGCGTAATCCCGTCTG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig947:186844..190467+

>mRNA_A-nodosum_M_contig947.17.1 ID=mRNA_A-nodosum_M_contig947.17.1|Name=mRNA_A-nodosum_M_contig947.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=825bp|location=Sequence derived from alignment at A-nodosum_M_contig947:186844..190467+ (Ascophyllum nodosum dioecious)
ATGGCAGAAAAATTGCTCCAAAACGTGTCTCGACTGGGTGGTGTCGTGGC
AATAGCAGCAGCAACCGACATGTGCTTGTTCAACGTGGACGGTGGGCAGC
GGGCGGTAATCTTCGATCGATTTCAGGGCGTCAAGAAGATGGTCGTTGGG
GAGGGGACGCACTTTATGATCCCCGTGATTCAAAAACCAATCATCATCGA
CGTACGCGCCAGGCCCCGCACCATCAATTCCATCACCGGTACGAAGGACC
TCCAGATGGCCAATATATCCCTCAGGGTGCTTTCCCGCCCGCTAGAGTCG
GAGCTGCCCCGCATCTACCAGGAGCTGGGCACCGATTTCGACGACAGGGT
GTTGCCCTCGCTGGGGAACGAGGTGCTCAAGGCCGTCGTGGCCAAGTACA
ACGCAGAGGAGCTCCTCAGCAAGCGTGAGGCGGTCAGCACCCGCATCCGT
GACGAGCTCACGCACCGCGCCAAGCAATTCCACCTCATCATGGACGACGT
GTCCATCACCCACCTCACCTTTGGCCACGAGTTCACCAAGGCCATCGAGA
ACAAGCAGGTGGCCCAACAAGAGGCAGAGAGGCAGGTGTACGTGGTGGCA
CTCTCCGATCAGGAGCGTCTGGCGTCGATCATCCGAGCGGAGGGTGAGGC
GGAAGCGGCCGAGCTCATCTCCGCGGCCCTCAAGGAGAGCGGAGTCGGCC
TCATCGAGGTGCGGCGTATTGACACCGCCAAGGACATCGCCTTGACGCTC
GCCAACTCTCGGAACGTGACCTACCTGCCTTCGGGGAACGGCTCCAACAT
GCTCCTGGGGCTCAACACTTCGTAA
back to top