mRNA_A-nodosum_M_contig94.35.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 1.010e-127 Identity = 206/408 (50.49%), Postives = 280/408 (68.63%), Query Frame = 1
Query: 1 KEVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDL-------RQSETVLGNFRSWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
K+VD+I+++YL AG+I+ S SPY++P+V++ K +GG+RIT +YR+LN+ + Q PIPR+D+ LD L R +S FDM S FHQI + +++PLTAF T+SGL+E L MP G+S +PG F +V+ +V +L H VA Y+DD++V ++ +S VD + + L HNLK++P K+ +GA E FLGHTISP GV+P+ KV AL K+ MP +V +LRSLLGGLSYYRKFLPN++ R++P+T LLKK F ME VR +L L PPVLVY D R R G TLEQ Q D ++RPIV++SR L +E+ W P++ EA IVW+IKRLR YL+ F I+TDH L +VG +NARVQRW+EFLT YNY + +RKG+A+GN D LSRL
Sbjct: 286 KQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDDNPASHVDTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISPDGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATFVFTLAMEQAVRILLSELANPPVLVYPDWDAVSDGSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRL 692
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5JUV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV3_9PHAE) HSP 1 Score: 377 bits (968), Expect = 5.310e-124 Identity = 197/408 (48.28%), Postives = 265/408 (64.95%), Query Frame = 1
Query: 1 KEVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDL-------RQSETVLGNFRSWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
K+V++I ++YL AG+I+ S SPY++P+VI+ K +GG+ IT +YR+LN+ + Q PIPR+D+ LD L R +S FDM S FHQI + +++PLTAF T+S L+E L MP G+S +PG F +V+ +V +L H VA Y+DD++V + + V + + L HNLK++P ++ IGA E FL HTISP GV P KV AL K+ MP +V +LRSLLGGLSYYRKFLPN+++R++P+T LLKK F ME VR + L PPVLVY D R G TLEQ Q D ++RPIV +SR L +E+ W P + EA IVW IK LR YL+ F I+TDH PL + G +NARVQ W+EFLT YNY + +RKG+A+GN D LSRL
Sbjct: 68 KQVEAIHDQYLAAGLIQHSTSPYSSPLVIIPKKSGGVCITVNYRKLNKLCALGQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGRFCKVVNEVIKNL-HDVASYLDDLIVFDDTLPTHVGTMRTLFERLRTHNLKLTPPQATIGATEADFLRHTISPDGVGPTGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLFAELANPPVLVYPDWDAVSDGSRPFHLYCDASHDGFGGTLEQEQPDGSIRPIVSISRATLDSERHWTPHDLEAGSIVWCIKCLRGYLWGTKFRIFTDHKPLEHFAKAGENNARVQGWLEFLTAYNYTLEYRKGSANGNADFLSRL 474
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5JFL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL9_9PHAE) HSP 1 Score: 387 bits (994), Expect = 5.930e-124 Identity = 200/408 (49.02%), Postives = 272/408 (66.67%), Query Frame = 1
Query: 1 KEVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDL-------RQSETVLGNFRSWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
K+VD+I+++YL AG+I+ S SPY++P+V++ K +GG+RIT +YR+LN+ + Q PIPR+D+ LD L R +S FDM S FHQI + +++PLTAF T+S L+E L MP G+S +PG F +V+ +V +L H VA Y+DD++V + ++ V + + L HNLK++P K+ IGA E FLGHTISP GV+P+ KV AL K+ MP +V +LRSLLGGLSYYRKFLP +++R++ +T LLKK F ME VR +L L PPVLVY D R R G TLEQ Q D ++RPIV++SR L +E+ W P++ EA IVW IKRLR YL+ F I TDH L +VG +NARVQRW+EFLT Y+ + RKG+A+GN D LSRL
Sbjct: 181 KQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATEADFLGHTISPDGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPFMAKRIRYLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLVYPDWDAVSDGSRPFHLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEASSIVWCIKRLRGYLWGTKFRILTDHKSLEHFAKVGENNARVQRWLEFLTAYSCTLECRKGSANGNADFLSRL 587
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5JJR1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR1_9PHAE) HSP 1 Score: 380 bits (975), Expect = 2.560e-123 Identity = 199/408 (48.77%), Postives = 270/408 (66.18%), Query Frame = 1
Query: 1 KEVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDL-------RQSETVLGNFRSWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
K VD+I+++YL AG+I+ S SPY++P+V++ K +GG+RIT +YR+LN+ + Q PIPR+D+ LD L R +S FD+ S FHQI + +++PLTAF T+SGL+E L MP G+S +PG F +V+ + A Y+DD++V +D ++ V + L HNLK++P K+ IGA E FLGHTISP GV+P+ KV AL K+ MP +V +LRSLLGGLSYYRKFLPN+++R++P+T LLKK F ME VR +L L PPVL Y D R R GATLEQ Q D+++RPIV++SR L +E+ W P++ EA IVW IKRLR YL+ I TDH L +VG +NA VQRW+EFLT YNY + +RKG+A+GN D LSRL
Sbjct: 43 KIVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDIKSSFHQITV-HDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNE---------ASYLDDLIV-FDDAATHVGTMRALFDCLRTHNLKLTPPKATIGATEADFLGHTISPDGVRPNGAKVSALTKMPMPRDVEQLRSLLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLDYPDWDAVSDGSRPLHLYCDASRDGFGATLEQEQPDSSIRPIVFISRATLDSERHWTPLDLEAGSIVWCIKRLRGYLWGTKCRIITDHKSLEHFAKVGENNAHVQRWLEFLTAYNYTLENRKGSANGNADFLSRL 439
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5K248_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K248_9PHAE) HSP 1 Score: 377 bits (969), Expect = 5.520e-122 Identity = 198/421 (47.03%), Postives = 276/421 (65.56%), Query Frame = 1
Query: 4 EVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDY--------------IERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDLRQSETVLGNFRSW-------LGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
+VD+I+++YL AG+I+ S SPY+ P+V++ K +GG+RIT + R+LN+ + Q PIPR+D+ L L + +S FDM S FHQI + +++PLTAF T+SGL+E L MP G++ +PG F +V+ +V +L VA Y+DD++V ++ V I + L HNLK++PSK+ IGA E FLGHTISP GV+P+ KV AL K+ MPN+ +LR+LLGGL+YYRKFLP +++R++P+T LLKKDV F ME+ VR++L L PPVLVY D FR + G TLEQ Q D +VRPIV++SR L +E+ W P++ EA IVW IK LR YL+ F I+T H L L +VG +NARVQRW+EFLT Y+Y + +RKG+++GN D LSRL
Sbjct: 188 KVDAILDQYLAAGLIQHSTSPYSIPLVVIPKKSGGLRITVNNRKLNKLCALSQLPIPRVDDTLAKLLKGKIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWFCKVVNEVIRNLRG-VASYLDDLIVFDETPAAHVAXSGQCCCPRMVLQATIRSLFERLRTHNLKLTPSKATIGATEAEFLGHTISPDGVRPNGDKVIALTKMPMPNDTKQLRALLGGLTYYRKFLPQMAKRVRPLTTLLKKDVKFEFMDSMESAVRQLLAELASPPVLVYPDWDAVSDGSRPFRLYYDASKDGFGGTLEQEQPDGSVRPIVFVSRATLESERHWTPLDIEAGSIVWCIKHLRGYLWGTYFKIFTYHKSLEHLAKVGETNARVQRWLEFLTAYSYTLEYRKGSSNGNADFLSRL 607
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5JP96_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP96_9PHAE) HSP 1 Score: 371 bits (952), Expect = 1.220e-120 Identity = 194/406 (47.78%), Postives = 271/406 (66.75%), Query Frame = 1
Query: 7 VDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDLRQSETVLGNFRSW-------LGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
VD+I+++YL AG+I+ S SP ++P+V++ K +GG+RIT +YR+LN+ + Q PI R+D+ L L +S FDM S FHQI + +++PLTAF T+SGL+E L MP G++ +PG + +V+ +V +L VA Y+DD++V ++ V I + L HNLK++P + IGA E FLGHTISP GV+P+ KV AL K+ MP + +LR+LLGGLS YRKFLP +++R++P+T LLKK+V F ME+ VR++L L PPVLVY D FR + G TLEQ Q D +VRPIV+ SR L +E+ W P++ EA IVW IKRLR YL+ F I+TDH L L +VG +NARVQRW+EFLT Y+Y + +RKG+++GN D LSRL
Sbjct: 4 VDAILDQYLAAGLIQHSTSPCSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPILRVDDTLKLL-KGEIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWYCKVVNEVIKNLRG-VASYLDDLIVFDATLAAHVATIRSLFERLRTHNLKLTPPNATIGATEAEFLGHTISPDGVRPNGDKVIALTKMPMPIDTKQLRALLGGLSNYRKFLPQMAKRVRPLTTLLKKNVKFEFTDSMESAVRQLLAELASPPVLVYPDWDAVSDGSRPFRLYYDASKDGFGGTLEQEQPDGSVRPIVFDSRATLESERHWTPLDLEAGSIVWCIKRLRGYLWGTHFKIFTDHKSLEHLAKVGETNARVQRWLEFLTAYSYTLEYRKGSSNGNADFLSRL 407
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5J8H9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H9_9PHAE) HSP 1 Score: 360 bits (923), Expect = 1.840e-117 Identity = 191/411 (46.47%), Postives = 269/411 (65.45%), Query Frame = 1
Query: 1 KEVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDLRQSETVLGNFRS-WL---------GATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
K+VD+I+++YL G+I++SQSP+ +P+V++ K +G +R+T +Y+ L + + Q P PR+D ++D+L + FS FD+ S FHQI + E++V LTAFCT + L+E L MP G+S +P F V+ +V H +A Y+DDV+V D V FL L ++NLK+SP KS +GA+E +LGHTISP GV P A KV+AL K+ +PNNV +LR LL GLSYYRKF+ L+ R++P+T LL+KD F M V E+L L++PPVL + D + V RS WL GA LEQ Q D +VRPI+++SR L +E+ W ++ EA IVWAIKRLR Y + F IY+DH L S+++VG NARVQRW+EFL + NY +++R G A+ N D LSRL
Sbjct: 13 KKVDAILDQYLAVGLIQQSQSPWASPLVVMPKKDGNLRLTVNYKTLKKLCSLGQQPQPRVDHIIDSLHKGKVFSIFDLNSAFHQITVEEDTVQLTAFCTPTQLFEWLRMPQGSSVAPSWFTMVINEVVKGPDHVLA-YLDDVIVFDADPVHHVANTRLFLGRLGKYNLKLSPLKSRVGAKEAVYLGHTISPAGVSPRADKVEALIKMPLPNNVKQLRFLLAGLSYYRKFIKGLAVRVKPLTDLLRKDAKFCYTPAMADTVEELLAKLSEPPVLAFPDW---DAVADGSRSLWLCCDACVDGFGAALEQAQADGSVRPILFVSRATLESERNWTVLDLEAGSIVWAIKRLRGYFWPTHFLIYSDHKALESIVKVGEHNARVQRWLEFLFSSNYTLVYRNGTANANADFLSRL 419
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5L5E4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E4_9PHAE) HSP 1 Score: 369 bits (948), Expect = 6.270e-116 Identity = 192/407 (47.17%), Postives = 267/407 (65.60%), Query Frame = 1
Query: 4 EVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDLRQSETVLGNFR-------SWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
+VD+++++YL AG+I+ S SP+ +P+V++ K +G +RIT +Y+RLN + P+PR+D +LD+L + + FS FD+ S FHQI+ E++VPLTAFCT + L+E L M G + SP F +V+ +V L +A Y+DDV+ + V + F K L ++NLK+SP K+ +GA +FLGHTISP GV PD KV AL + P NV +LRSLLGGLSYYRKFL NL+ +++P+ LLK+ VPF M VV+ +L L +PP+LV+ D E R GA+LEQ Q D +VRPIVY+SR LP E+ W ++ EA IVWAIKRLR YL+ F IY+DH L S+ +VG NARVQRW+EFL+ + Y + +RKG+A+GN D LSRL
Sbjct: 72 KVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMLQGANASPSWFVKVINRVVHGLERVLA-YLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVKTLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRL 477
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE) HSP 1 Score: 362 bits (928), Expect = 1.570e-115 Identity = 181/402 (45.02%), Postives = 266/402 (66.17%), Query Frame = 1
Query: 19 IEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDLRQSETVLGNFR-------SWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
++K L AG++RRS S + + +V+V K NGG+R+T +Y+++N+ +VIP+ PIP ++++L L SA+ FS+ D++SGF Q I E+S+P+TA T +GLYE + MP G S SPG F VMQ+V L V ++IDDV+V S + + V +ERF + +T+ NLK++P K+++G + ++FL H ++ G++P KKV + ++ MP NVS+LRS+LG LSYYRKFL +S +L +T LLKKD F ++ V++E+ L+ P VL + D + T FR S LGA +EQ Q+D TVRP+ YLSR+ PNE+ W+ E E IVWAIK+ R + IPF IY+DH PL +L + N RVQRW +FL+ Y Y +I+R G A+GN D +SRL
Sbjct: 1 MDKLLLAGVLRRSYSNWASSLVVVAKANGGVRLTVNYKKVNQMSVIPKLPIPVVEDILADLKSAKIFSTLDLISGFFQCCIEEDSIPITAVITATGLYEFMAMPQGLSSSPGWFHSVMQRVCDGLER-VRLFIDDVIVYSRNGAEHVQDLERFFERMTKFNLKLAPKKAQLGVKVVTFLEHQVTAEGIEPCPKKVKPMLQMPMPTNVSQLRSILGSLSYYRKFLKGMSAKLHSVTALLKKDAKFAFTAKHAEVIQEMKDKLSSPEVLAFPDYEGAITGKRKFRLITDASISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRL 401
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Match: A0A6H5L6E5_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E5_9PHAE) HSP 1 Score: 351 bits (900), Expect = 4.890e-114 Identity = 188/408 (46.08%), Postives = 253/408 (62.01%), Query Frame = 1
Query: 1 KEVDSIIEKYLKAGIIRRSQSPYTAPIVIVLK*NGGIRITCDYRRLNEATVIPQTPIPRIDELLDTLGSARFFSSFDMMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVTADLAHFVAIYIDDVLVRSNDESSMVDYIERFLKALTRHNLKISPSKSEIGAQEISFLGHTISPRGVKPDAKKVDALRKLSMPNNVSELRSLLGGLSYYRKFLPNLSRRLQPITRLLKKDVPFPSNSEMEAVVREILKVLTKPPVLVYEDL-------RQSETVLGNFRSWLGATLEQPQKDNTVRPIVYLSRTVLPNEQGWAPIEKEARYIVWAIKRLRQYLFLIPFNIYTDHLPLTSLLRVGVSNARVQRWVEFLTTYNYRIIHRKGAAHGNTDMLSRL 1203
K+VD+I+++YL AG+I+ S SPY++P+V++ K +G +RIT +YR+LN+ Q PIPR+D+ LD L R +S FDM S FHQI + +++PLTAF T SGL++ H R VA Y+DD++V + ++ V + L HNLK +P K+ IGA E FLGHTISP GV+P+ KV AL K+ MP +V +LRSLLGGL+YY KFLPN+++ ++P+T LLKK F ME V +L L PPVLVY D R R G TLEQ Q D ++RPIV++SR L +E+ W P++ EA IVW IKRLR YL+ F I+TDH L +VG +NARVQRW+EFLT NY + +RKG+A+GN D LSRL
Sbjct: 88 KQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGSVRITVNYRKLNKLFAFSQPPIPRVDDTLDNLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTCSGLFD-------------HQLRG-----------VASYLDDLIVFDDTPTTHVGTMRALFDCLRTHNLKFTPPKATIGATEEDFLGHTISPDGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLNYYPKFLPNMAKHIRPLTTLLKKQEKFIFTPSMEQAVCVLLAELANPPVLVYPDWDAVSDGSRPFHLHCDASRDGFGGTLEQEQPDGSLRPIVFISRATLDSERHWTPLDLEAGSIVWCIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTADNYTLEYRKGSANGNADFLSRL 471 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig94.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig94.35.1 >prot_A-nodosum_M_contig94.35.1 ID=prot_A-nodosum_M_contig94.35.1|Name=mRNA_A-nodosum_M_contig94.35.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=324bp MMSGFHQIMIGENSVPLTAFCTTSGLYELLVMPMGTSGSPGHFQRVMQQVback to top mRNA from alignment at A-nodosum_M_contig94:341302..342523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig94.35.1 ID=mRNA_A-nodosum_M_contig94.35.1|Name=mRNA_A-nodosum_M_contig94.35.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1222bp|location=Sequence derived from alignment at A-nodosum_M_contig94:341302..342523- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig94:341302..342523- >mRNA_A-nodosum_M_contig94.35.1 ID=mRNA_A-nodosum_M_contig94.35.1|Name=mRNA_A-nodosum_M_contig94.35.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=972bp|location=Sequence derived from alignment at A-nodosum_M_contig94:341302..342523- (Ascophyllum nodosum dioecious)back to top |