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Homology
BLAST of mRNA_A-nodosum_M_contig93.51.2 vs. uniprot
Match: D7G5P7_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P7_ECTSI) HSP 1 Score: 145 bits (366), Expect = 3.160e-31 Identity = 142/411 (34.55%), Postives = 202/411 (49.15%), Query Frame = 2
Query: 1457 VPTSSTMTASVQLNGVTGRDEETLKVNLMEGFTAALSLNS---AMNVTIAIEQFS---PETSASVRIRGRRSLQQETCSMST-ETCTVTATATVAF------EAGDSSARGVESLSVKENFEMIAESADVDASDVTLSELKVSADPNEPVSNDDSVD-LVGQTTSSSXXXXXENYWLXXXXXXXXXXXXXCCLCWAYLRYSNAKEEISADQARRSASSTGRWGGDSYGD--PPSPSKGVDSIERAKMDTLIMDQKRKEKTKSMGGNDSQVGLRTSLEDIPEESGSSAGDPNFKDNRSSRVNMISRNSVGRSSWEEXXXXXXXXXXWEASRRSFREGGAVPSGRQVLSRGKQRSTGSSSFSDELAAQRGPEARRASGGSRRNTFSSAGESSTSNEVDQRTSNTSNTSGGVSG 2641
VP S+TMTAS++L GV GR EE L+ +L EG A+S + V ++I+ S E++ R+RGRR LQ+ C + +TCTV ATATV + ++G SSARGV+S+S KEN + IA +A V+ SD+TL L VSAD ++ V + D +VGQT SS NYWL CCLCWA+ RY+ +++E D +++ RW GD + D P +GV S +R ++DT ++ E S G S + S+ + A+ + G SGRQ+LSRG+Q+STGSSSFSDEL G A G RR++ + + + TS+ D R +S S G+SG
Sbjct: 724 VPVSATMTASLELAGVFGRTEEELQADLEEGMAEAISDSDDSVPRTVNVSIDDLSVPNDESTRRTRVRGRRRLQETECVLENGDTCTVKATATVVYSSGAEDDSGGSSARGVDSISNKENLQKIASAAGVEGSDLTLGSLIVSADESDQVLDSSETDGVVGQTIVSSDGADASNYWLFILAAALLLLLWLCCLCWAWQRYNMSQDE--QDDTYDDSTTGARWAGDKHRDSSPTFKGRGVASSDR-QLDTAVV-----EDIISQQGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEGGVGDQSLSSA----------------AAAGAGATGKVKASGRQILSRGQQKSTGSSSFSDELVGPLGDPA-----GGRRSSHNQSSDHYTSD--DTRQFGSSGMSSGISG 1103
BLAST of mRNA_A-nodosum_M_contig93.51.2 vs. uniprot
Match: A0A6H5KFS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS6_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.080e-27 Identity = 101/250 (40.40%), Postives = 142/250 (56.80%), Query Frame = 2
Query: 1460 PTSSTMTASVQLNGVTGRDEETLKVNLMEGFTAALSLNS---AMNVTIAIEQFSPETSASVR---IRGRRSLQQETCSMST-ETCTVTATATVAF------EAGDSSARGVESLSVKENFEMIAESADVDASDVTLSELKVSADPNEPVSNDDSVD-LVGQTTSSSXXXXXENYWLXXXXXXXXXXXXXCCLCWAYLRYSNAKEEISADQARRSASSTGRWGGDSYGDP-PSPSKGVDSIERAKMDTLIM 2164
P S+TMTAS++L GV GR EE L+ +L EG A+S + V ++I+ S T S R +RGRR LQ+ C + +TCTV ATATV + ++G SSARGV+S+S KEN + IA +A V+ SD+TL L VSAD + V + D +VGQ SS NYWL XX CCLCWA+ RY+ +++E D +++ RW GD + D P +GV S + ++DT ++
Sbjct: 487 PVSATMTASLELAGVFGRTEEELQADLEEGMAEAISDSDDGVPRTVNVSIDDLSVPTDESTRRTRVRGRRRLQETECVLEDGDTCTVKATATVVYSSGADDDSGGSSARGVDSISNKENLQKIALAAGVEGSDLTLGSLIVSADESNQVLDSSETDGVVGQNIVSSDGADASNYWLFILAAALLLXXWLCCLCWAWQRYNKSQDE--QDDTHDDSTTGARWAGDKHRDSSPYKGRGVASSNQ-QLDTAVV 733
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4743 |
| Hectar predicted targeting category | other localisation |
| Exons | 12 |
| Cds size | 2553 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870401.866643-UTR-A-nodosum_M_contig93:631214..631354 | 1680870401.866643-UTR-A-nodosum_M_contig93:631214..631354 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig93 631215..631354 + |
| 1680870401.8801386-UTR-A-nodosum_M_contig93:633170..633316 | 1680870401.8801386-UTR-A-nodosum_M_contig93:633170..633316 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig93 633171..633316 + |
| 1680870402.0154266-UTR-A-nodosum_M_contig93:640444..641093 | 1680870402.0154266-UTR-A-nodosum_M_contig93:640444..641093 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig93 640445..641093 + |
| 1680870402.0374706-UTR-A-nodosum_M_contig93:641123..642378 | 1680870402.0374706-UTR-A-nodosum_M_contig93:641123..642378 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig93 641124..642378 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870401.8910675-CDS-A-nodosum_M_contig93:633316..633357 | 1680870401.8910675-CDS-A-nodosum_M_contig93:633316..633357 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 633317..633357 + |
| 1680870401.9018736-CDS-A-nodosum_M_contig93:633637..634841 | 1680870401.9018736-CDS-A-nodosum_M_contig93:633637..634841 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 633638..634841 + |
| 1680870401.9145749-CDS-A-nodosum_M_contig93:635088..635220 | 1680870401.9145749-CDS-A-nodosum_M_contig93:635088..635220 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 635089..635220 + |
| 1680870401.927834-CDS-A-nodosum_M_contig93:635553..635709 | 1680870401.927834-CDS-A-nodosum_M_contig93:635553..635709 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 635554..635709 + |
| 1680870401.9381928-CDS-A-nodosum_M_contig93:636753..636933 | 1680870401.9381928-CDS-A-nodosum_M_contig93:636753..636933 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 636754..636933 + |
| 1680870401.9516659-CDS-A-nodosum_M_contig93:637499..637649 | 1680870401.9516659-CDS-A-nodosum_M_contig93:637499..637649 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 637500..637649 + |
| 1680870401.9635358-CDS-A-nodosum_M_contig93:638115..638424 | 1680870401.9635358-CDS-A-nodosum_M_contig93:638115..638424 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 638116..638424 + |
| 1680870401.978602-CDS-A-nodosum_M_contig93:639058..639188 | 1680870401.978602-CDS-A-nodosum_M_contig93:639058..639188 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 639059..639188 + |
| 1680870401.9918306-CDS-A-nodosum_M_contig93:639668..639856 | 1680870401.9918306-CDS-A-nodosum_M_contig93:639668..639856 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 639669..639856 + |
| 1680870402.003035-CDS-A-nodosum_M_contig93:640381..640444 | 1680870402.003035-CDS-A-nodosum_M_contig93:640381..640444 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig93 640382..640444 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig93.51.2 >prot_A-nodosum_M_contig93.51.2 ID=prot_A-nodosum_M_contig93.51.2|Name=mRNA_A-nodosum_M_contig93.51.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=851bp
MRGLGQPCRACADNCDGGGLDVCVACDEVQTPAPSITTPAPSQPPETLAP
SDMVPTPVPSDITPTVVPTATETPVVTPTPVVTIAPTETAAPVATTTASS
ITTPAPSQPPETLAPAEMVPTPVPSEIAPTGVPSATDTPVVTPTPVVTVA
PAETAAPVATPAPQFILPPQLSLPPGFTLPPGFTLPPGFTFPPGFTLPPD
FTLPPDFTLPPEISLPPAFLPTESTLAPGVTTAPGATMAPADTTAPEATM
ALTNAPTTEIIPTAPSMGPTRFPSVAPMVSPTAIPTSVPTRSPTAVPTAV
PTISPTAVPTVVPTGSPTAVPTAVPTGSPTAVPTAVPTDLPQLYRLQSQR
HLHSGTDRSPNGISHSGTDCSPNGISDSGTDCSSNGSPTAVPTSSTMTAS
VQLNGVTGRDEETLKVNLMEGFTAALSLNSAMNVTIAIEQFSPETSASVR
IRGRRSLQQETCSMSTETCTVTATATVAFEAGDSSARGVESLSVKENFEM
IAESADVDASDVTLSELKVSADPNEPVSNDDSVDLVGQTTSSSSSPSSEN
YWLFILALALLLMLWLCCLCWAYLRYSNAKEEISADQARRSASSTGRWGG
DSYGDPPSPSKGVDSIERAKMDTLIMDQKRKEKTKSMGGNDSQVGLRTSL
EDIPEESGSSAGDPNFKDNRSSRVNMISRNSVGRSSWEEEEDDDDDDDDW
EASRRSFREGGAVPSGRQVLSRGKQRSTGSSSFSDELAAQRGPEARRASG
GSRRNTFSSAGESSTSNEVDQRTSNTSNTSGGVSGSGSGSGGISSSFTSS
AGVTSSTVEDDRENNDDQGSSDYDSVSKDDATSSVPEHGAGAPERAPETS
* back to topmRNA from alignment at A-nodosum_M_contig93:631215..642378+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig93.51.2 ID=mRNA_A-nodosum_M_contig93.51.2|Name=mRNA_A-nodosum_M_contig93.51.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11164bp|location=Sequence derived from alignment at A-nodosum_M_contig93:631215..642378+ (Ascophyllum nodosum dioecious)
CTGtgaTGATGATACTACGGGCGAGGGTTGCGTTCTCTGTGAAGGAGACC
CGCCGACACCGGTACCGACCAGCACGCCGGTAGAGGGCGCGACGCGAGCT
CCGGTGGAAGCAGGCGCGTCTATCCCTCCGGACGCGATCGGTGAGCTCCA
GTCGTAGATGCGCTTGTTACAATGTATTTGATATGGAGTAGGGGGGTTTG
ATTAACCGTTCTGACATTTTTGATACAGCGCATAACTTTCCTATGGTTTG
GTTTGGTAAACAGAATAGATTCTGAAAAACTGGCAGCATTTCAGACAGTA
GACTCGACGCTGTATTTCGTCCCCAAAGACATGATGACGTCGTCTGTCTT
AACGCCGATAACTTTCCGATGTTGTCGAGTGGGTGGACTTGACAGGATTT
TGTCGCGGTTTGGATGTCTGCTTGTTGAGAGCAATGTGTGTGTGTTGCCA
TCCCAATTATTCTGGGCGTCAGGCTTATGGACGTAACAGCCGGGGTCACA
CAGGAGGAAGGTCACACAGGATTGGATTTCTCATCCGCCCTCCTTCTGCG
GTGCTTGCCTTAATCTTTTAATCTATCGAGAAGGATTCAGCCGTTTTTTT
CCCTCGTCGACCGTGAAGTATATCGAATGTTGCGTACTAACGAATTAATC
GTTCTCCACTTGTTGAGCATATTTTTATTTTTATTTTTTTTAGTGAGGAA
AAATCCCAGTTACCAGGATTCGAACTCACGTCCCAACGTGTCAGAAGGTT
TCGAGATCACCAACTGAGCTACCGGGGCGACCGGCTACAGTAGTATTGGG
TTGTGACCCTTAATGATGTGACCCATTGGCCTTCGTGCTTCTTTGTGACC
ACTGTTAATGGCTTGATTGTCATTTGATACCGTTGTGTCACCGTAGTTGT
TTCAGTTAATTAATCAATACGATCATACCGATCAATCAACTGTACTTAAG
CGGGCGACGGTGACTACTGTACGGTGCACACTATTCAGGTGGTGTCCTGA
TAGACGTCATTTTTAGTACTCCAATACCGGTACGGTATTTCGGGACCAAC
ATAACCGATACTTGACTCCCCTGTACTTTCTGTATCGCGCATAATGTATG
TTAGATTACGTATGTTAGATTATATATGTTAGATTATATATGTTAGATGT
CCACTTCATACCAATAATGGGTGTGGGGAAAAGAGAGGCGGGCTGAATAT
TGGTCCATGGTGATACTTGAAAAGGCAGCACTCGTTCGGAACTACCTTGA
GGTTCACTGGCCTGTGTCGCAAACTCTCGGCAGTGAACGCCATCGGTACG
CACTTGCGTGATTACTGACCCGAAGGTGTTCGCCGGTATAAATAAATAAA
TGGCCTATGACGCCGTCGCGGAAAGCGGGAAGAATCCCGTGAGTACACCA
TATATATTCATCCTGAGTGTGGAGAACGAGCGGGCTGACGCAGGACGGGA
CGGCAGAACCTGTCTCGCGAGACCAAGTTCTCAGGGAAAATAAGTTTCTT
CAGCGGACCACGAGCAGGATTGGCAACCTTACCCGGGTGATGGCAACCCA
TACTCTGCTATATGTGATGGCCAAACATGCATTGATCCACATAGATCCAT
AGTATCCAAAACAGCAGGAGCTGGCGACTGTTGGGAGAAGGGTAGTGAGC
TCGAGTAGGCTTTGCATGTTTCATCGAGTTCGGAGGCAGAAGAAAAGAAT
GCGGAATTGGCTGACGATATTTTTGTCGAAGCTTACTAAGAGGCGGTTAT
GTCGAGTGCCTTAGGCGATGGGTCGCTGCTTTTACGGTAGCTATGATAGC
CCGTATTCGCAAGCGTAGGAGGAAAAACCGCTTGCCGTCCCCATCGGTCC
CTGGGTCCCTCGATCTTATTTGGTCTTGTTTGTCTTAGCCGAGATGTGGA
TCCGTCACCACTCCGCTTCCTCTTGCCTcCTATGGTGTGGATGATTTTTG
CGCCAGACAAGGAATCGTGCACTGCGGCAAGGTGCCTGGAAAGGGCCACC
GATGACGACCTCTCCTACTTCGAAGAGAACGACCTCACCTTGTTCTGCGA
CAACAAATGCTTCGATACCTCGTCTGATCCGCGCGGCGGTCTGTTGTGTA
ACATGAGAGGACTCGGGCAGCCCTGCCGAGCCTGTGCGGACAAGTGAGGG
CTGGGCTCTCTCTCGTTTACGGTTTGAAGGAGACTTGATGGCGTTTTTCA
TTTTCCACGACCATTTGCACATCGCATGGCACGATCTATTTTTAGCGCAT
TGTCTACTATAACAAAGTTTTTCGTATCGTGCAAGGGAAACTTCGCTCGA
CACCTCATCGGTGAGATCGTAAAAGGCGTCTAGTTCATGTTGAGGTTCCT
AACGCCCACAGCTTTTTTTGCCTGTCTGCTGCCTCGTTGCTGCCCGTGCG
ACCGCTCACGCTCCGATTCCCAGCTGCGACGGCGGGGGACTCGACGTTTG
TGTTGCTTGCGACGAGGTTCAGACCCCTGCTCCGAGCATAACTACTCCCG
CGCCGTCCCAGCCTCCCGAAACGCTTGCTCCGTCAGATATGGTGCCCACA
CCAGTGCCTTCTGATATCACCCCTACGGTTGTGCCCACCGCAACGGAGAC
TCCGGTGGTTACCCCAACCCCAGTGGTTACCATCGCTCCGACAGAAACAG
CCGCGCCTGTAGCTACCACGACAGCTTCGAGCATAACTACTCCCGCGCCG
TCCCAGCCTCCCGAAACGCTTGCTCCGGCGGAGATGGTGCCCACACCAGT
GCCTTCTGAGATCGCCCCTACGGGTGTGCCCAGCGCAACGGACACTCCGG
TGGTTACCCCAACCCCAGTGGTTACCGTCGCTCCGGCAGAAACAGCCGCG
CCTGTAGCTACCCCGGCACCTCAGTTCATCTTACCACCCCAGTTAAGCCT
GCCACCAGGATTCACCCTGCCACCCGGATTCACCCTGCCACCCGGATTCA
CCTTCCCACCAGGATTCACCCTGCCACCCGATTTCACCCTGCCACCCGAT
TTCACCCTGCCACCAGAGATTTCCTTGCCACCCGCGTTTTTACCAACCGA
GTCAACCCTAGCACCTGGAGTTACCACGGCACCCGGGGCCACGATGGCGC
CTGCAGATACCACGGCGCCTGAGGCCACCATGGCGCTTACTAACGCCCCA
ACGACGGAAATAATTCCAACGGCGCCATCGATGGGTCCCACACGATTTCC
GTCCGTAGCACCGATGGTGTCTCCAACGGCGATACCGACGTCAGTCCCCA
CGAGATCTCCCACAGCGGTACCGACCGCAGTCCCAACGATCTCTCCCACA
GCGGTACCGACCGTAGTCCCAACGGGATCCCCCACAGCGGTACCGACCGC
AGTCCCAACGGGATCCCCCACAGCGGTACCGACGGCTGTCCCAACGGATC
TCCCACAGCTGTACCGACTGCAGTCCCAACGGCATCTCCACAGCGGTACC
GACCGCAGTCCCAACGGCATCTCCCACAGCGGCACCGACTGCAGTCCCAA
CGGCATCTCCGACAGCGGCACCGACTGCAGTTCCAACGGGTCTCCGACAG
CGGTACCGACTTCATCAACTATGACCGCCAGCGTTCAGCTGAATGGCGTC
ACCGGAAGGGATGAGGAGACTCTCAAGGTTTCACCGTTGATTACGCGAGA
AGTTCGTGGTGTGCAATGCGTTGTTTTTGTCGAACGGTAGGCTGCGATTC
TCCCTGTCGCAGGGACTACACTGTAGTCGATGGTCCCAGCAAAGAACCCT
CGTGACGGCAACATTTTGGTGGCGTGTGGATTTGCCAAATTCTTTCTCTG
AAAAGCGCAAGCATACTAACCTATCCAGCGTTTGTCCGGTGAAATGCCTA
CGCCCTTTGATTCCTTTTTCAAAGGTAAACCTGATGGAAGGTTTCACGGC
CGCATTGTCTTTGAACAGCGCCATGAATGTGACCATAGCCATCGAGCAGT
TCTCGCCGGAAACTAGCGCCTCCGTGCGCATCCGCGGCAGACGCAGCCTT
CAACAGGTGTTGTATTAGATATAGTAGAGCATTACAAGATGTATCGCATA
GCTTGTCCCAACGACTGCTTCATTTATTTATTTATTTTTAAATCTTCTCG
AACAACTTGCAATAAGCCTTGAAGCAGCCTTGAACAGCCTTTGGGAGGGG
TTCTCTGTCGTCAATCTGACAGCTAGTTTTGCACAAAGGGCTGAGAAAGT
TGTCAAGCTAGAGCCATGACCACACCCGTCGCGCGTACTCGCGAATCTTC
GCAGGCAATTTGAAAACGCATGACGTCATGAAGGGTTTCACTGTACGTTC
GACGGTGTTTGTTTTTTTACGCTGAATGTTTGGGAGCAGGAGACATGCAG
CATGAGCACTGAAACGTGCACCGTGACCGCCACCGCGACTGTGGCCTTCG
AAGCGGGCGACAGCTCTGCTCGGGGTGTTGAAAGCCTGTCGGTAAAGGAA
AACTTCGAGATGATCGCCGAGAGCGCGGATGTAGACGCTTCAGATGTGAG
AAATGGAGGGGAGAGCGAAACATTCGCGCTACTTCACAGTAGCGTTAACC
CACAGTACCTACCGCGAGAGATGCAGCCTTCGGATATTTTTCTTTGCCGC
CCGGTCCGTGTCTGTATGCTGTATGGTGCATGCTTTATAGCGGCAGGGAA
CAGAAACCCCCATACACTACCAACAGTAGTTGTTGGAGGTTGTTAAGTCC
TGGTTCTCGAAACGCTGCGATTTTAATATTATTATTCTCCACAAGAGCGC
GTCAAAATTTGGTACCCGCTGTCGGCGAGGAATGTTGGCAGAAGAGGAAA
TCACCCAATCCCTTAGGAAGCATGTTCCACTCTTTTAGCCACCTTGCACG
CGAGTATCTTTAAACAGTATGACCGAAAACTCTCTTTGAACGCGGGAGGG
CGTATCGATTTTACTAATTTTTTTTAGGTTCGCGCTCCTAGGGTACCCAC
GGAAGAACGCCGCGGGCGATCGCCTTCAGACAACCCCCCTCTTGTATAGG
GTGATGACTTTTATTTATAATAGTTGACACCCAATGGCTGCAAGGCAGTT
CCGAAGCAGCGCATATCCCAATGAGTTCATTGAAAATTTTGAACGAATAC
GAGCCTTCCGAACATCTACACCTTCCGTCCTGAGGGATGCTTCTCGAAAC
GTTTATTGATAGTTGGGAACAATGGCAGTTATTAATGGGACGTGATACTA
ATGCTGTACATTATGGTGCGTAGTGCATATGGTGCGTACAGTATCTTTGG
CATGATAAGTAAGTGGATTTCTCTTAGAGGTACGGTGTAGGGGGTGGTTG
TCATCCCCTTGAGAATGACTCTTAACAGCCTCTATACATAAATATCATGT
ACCGGGTATATATTTTAGTTAGCTACACTGTTTGCCATCGCGTTGAGTTA
CGCAGCGCGTCATGGTATCCAAGGCCATGGACTTATTGCACGGTACGGTA
TAATATAATATAGTATATTTGTCGCGTGACGCTGTTCTACGCTTGAGTTC
ACTCTCACGATGCAGTACCGTTACCTTTTCGAACATCAGGTTACGCTGAG
CGAGCTCAAGGTCAGCGCAGACCCGAACGAACCGGTTTCGAACGATGACA
GCGTAGACTTGGTGGGGCAGACGACGTCGTCTTCGAGCAGCCCATCGTCC
GAAAACTATTGGCTGTTCATCTTGGCCCTCGCGCTGCTCCTGATGCTCTG
GCTGTGTTGCTTGTGTTGGGTGAGCAAAAGGGCCTAAAGCACTTCATATT
TGGGCGATACTACTGTAAATATTTATAGTACTATAACAAGTAATAGAATA
AATTAAAATATGCCAATGAAGCTAAACAAGTGTGATACTACACAAATCCG
CTTGTCGTGCATCTTTTAACCACCGAAATAACCGTTACGGTACTCTTCTG
CAAGTTTTATATAGATTTTATGCTTTACAGATTTCATCTCACTTGACTTA
ATAGGCTAAAGACATGTGACTCAAGGCGTGCAGTGGCGAAACTGTTTATA
CCCTTAGACAATATACAGTACGTGTACAGTGCAGGTATAGGTCCAGGAGT
AGGTCGACGGGGCGCGCGTCGAGCACGGGTCACGGCCACTAAAATGCCCC
CGAAATGCCCTTTTTGAGCTGTCCCCAGAAGGAAAGAGCCGGCAGACAAG
ACAAGGTCGCGGACGCTAAGAATAATCATGGAACAGGTCATCGCGTTTGC
CGTTGTCGTGGAAAAGGTCGGGGAAGCCTTCGTTTCCTCATATTGTGTTG
GGCGATGAACACAACTTTTGCTGGGCGATGAACAGGCTTACCTACGCTAT
AGCAATGCTAAGGAGGAAATTTCTGCGGACCAGGCAAGGCGCTCCGCGTC
AAGCACGGGTCGTTGGGGCGGAGATAGCTACGGAGACCCACCTTCTCCTT
CCAAGGGCGTCGACAGCATCGAAAGGGCCAAGATGGTGCGTGTGCCGCGT
CAAATCGCGTTTGCCTTGTCGCCAAGATCCTGGCGTGGTTGCTGGGACAT
CGCAGAGCTTGTCGGGCTTTTCACGATACTGTACAAGCTAATAAAGTAGC
TATTCTGAGGTTGCATCGCACTGACCTCGCGGTCTATATTCCTCGTCGAT
AGATGCTGTCCCGGTTGGGTTtcgCATGTGGCGAGAGGCATGCTGCCTTA
TGACGCCTTATGTAGGGTGAGGCAGTAAGAACAAAAAAAGGAAAGCTGCA
TTTTCGCTGTAGGGGTATAAGAGCCGGGTCCATCTACCCCTTGTTATCAA
CGTATTAATACATTCATATCAATAAAAAGTGGTACTTGAAGTATATGATA
GTGTGTATGAAATAGTAGAGCTCTTGTTTACTCCGTTTTTTTATCCTCGT
ACGGGTCAATACCTTTGCTTGGTCCATGCCTCGGGCGGAAACTCAATCCA
GGATACGCTGATAATGGACCAGAAGCGCAAGGaAAAAACCAAGTCCATGG
GAGGAAACGATAGCCAGGTCGGGCTCAGGACGAGCCTGGAAGACATCCCG
GAGGAGTCTGGCTCCAGCGCCGGGGACCCCAACTTTAAGGACAACCGCAG
CAGCCGCGTCAATATGATTTCGCGAAACAGCGTCGGGAGGAGTTCTTGGG
AAGAAGAGGAGGATGACGATGACGATGACGACGACTGGGAAGCGAGCAGG
AGATCGTTCCGCGAGGGTGGGGCGGTTCCCTCCGGACGTCAGGTGTTGTC
TAGGGGCAAGGTGAGTCTGTTTTGCCTGTATGGTCATCACATATATAACC
GAGTATGTATCAACCGGGTAAGGCTGCCAATCCTGCTCGTGGTCAGCTGA
ACGGGGGAAATGAATATTTCCCCCTCCGCGTTCGCGCCTGAGAATTTGGT
CTCGCAAGACGGGTTCGGCAGTCCCGTCCCGCGTAAGCTTGCTCATCTCC
ATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTGCTCCCGAGTTCCG
CGGCGGCGTCCATTTATTTACTTAAAACCGCCATACGCCATCGGGTCAGT
CCCGAGTTTATCGGGTCACGCAATTGCGTACCAATGGTGTTCACTGCCGA
GAGTCTGCCGGCACAGGGCCAGTAGTACCCAATAAGGTAGTTCCAGTGAC
GGGTGCTGCCTTGGCAGGTCACCATGGATCAATTAATTTGCGCCTCTCTT
TTCTGACACAAACCCAATTTAAGAGTGCCCCTCCCTCGCTTGTTAGAACA
TACGGTTCGGTCTTAGCTCTTCGATCCTGGACCATTGTTTCTCGTGTGTG
TTTGTGTTTGTGTGCATTTATCAAATTGCACCTAACCGCGCAATCCGGCC
CTCTCATCCTAGTCATTATATGCCACATTTTTGATGATCCACAGCAACGG
TCCACGGGCAGCAGCTCTTTCAGCGACGAGCTCGCGGCGCAGCGTGGGCC
GGAAGCTCGTAGGGCTAGTGGTGGTTCCAGGCGGAACACCTTCAGCAGTG
CGGGCGAGAGTTCCACGAGCAACGGTAGGATAATGTCGAGCAATGTTATG
TATGTAAGTTACAATGGAAGGAAATGAAGAGAGCAGGGAAGCCGAGTCGA
CGTCGTTTGGTGTGTGACTGACGTACGACTGACACACGAGTCTCCAACCC
CTGTAGGGCCCCTATATCAAGGCAAACCACCCTAGACCGGTACTGTAAAC
GACCGTTGGACTTGACGTGGCATCTTTGGCCTATAAATTCTTCCTGTGTT
TTCTCGGGCTATAAATCCGTCCGTGTCGGTGGTTTGCTTTGCGAACTCTG
ACAGACATTTGGCGGACGATAGAGTCAATTTTCGCGTACCACGCACAGGT
AAATCAAAAGGGCCTAAAAAGCACCTAAAAAAGTTGGAGCTGGTTGTCTT
TGCCTAACGGATACATAAAAAAGCGCCCTAAGCTAAGGTCACTCTCCACC
CCCCTCCTCATCCTTGCCGTCGCTTTGCCGTATGCCGTATTCGATTGATC
GCAGAAGTAGACCAACGAACGTCCAACACCTCTAACACGTCCGGTGGAGT
GTCGGGATCGGGATCGGGATCGGGCGGTATCTCTAGCTCCTTCACGTCTT
CGGCGGGAGTGACATCGAGCACAGTGGAGGACGATCGCGAGAACAATGAC
GACCAGGGGTCTAGCGATTACGACAGTGTTTCGAAAGATGACGTGAGACG
AGGGTTTTCGACAAGCATTTCGAGGCGTTTGATAACTGTCGTGGCAGAGC
TTCAGGCAGTTGAAGAGCGGCCCAGTGCTTGAATGGCGTTTTCCGATATT
GCGCAAATGTTCCGTGTTGGTCTATTTGGTCTGTTTGCTATCACTCGGGG
CAAAACCGCATTTGGGCTGGGCTAACATTTGGCGTCATCCCCCCCTCCCC
CCCCCACCCACCGTGGACAGTATATATAGTATATATAGATATGACCACCT
TCTGAGTACACCTTCTGAGGACTGAGGAGTAATACCAAAGCATTTTCTCT
AGCTTGTTGGCCAAGGATGTGTGCGGTCCTTTATTCCCTTTGTCCGTCGT
GTTTCGAAAAATGGCATGAACTACTTGAACCACCTGTACGAAGCATGGCA
TGATGCAAGGCATGATGCAAGGCTCGTTGGCATGGTGGTGGAAATATAAT
ATGTTGCTTTTATTTACACCGTTTATCACATATTATGCATTCAAAACACT
TTGTCCGCGTGCACCAGGCCACATCATCGGTCCCTGAACACGGAGCAGGC
GCCCCCGAGAGGGCGCCCGAGACGTCGTAGCCCCGACAGGAACACGCTTC
CGGAGGATGAAAACCCTCCAACCGGAGCTTATTCGAACTGTCCACTTCAT
AATTCTTTCTACTAGTGCAGTACTACAAAACCTTATATGATATGTGGGCG
GTGAGGGATGCTGACGAGCTGTTTTCGGTACTGCCTCAGTAGGGACGTAC
GATGGAGGAAAGTGGAGAGTGAAGGGTCATTTCCTCCCATCTGCCTCCGT
TACCCGCAGACTCTCGCAGAAACGATCGGCCGCTTTCGCTGTGCGGCGGA
GTCTGTCGTCTTAACGAAGGGCGAGGTGGAGAACTTTCCCCATAATTTTC
TTGGCTACGTTGTGTCCATTCGCCTGCTTCTTGAATATGGCCAGGGAGAA
TGTCGTGCTTGCGAATAATCCGAAGGGGAAGGTGGAGATATTTCCCAGAA
GGTTCTTGGCGATGTTTCTTCCGTCCCGCACGTTTCTTGAAGATGGTGCG
GGAAAACACGTGTTTGCGGGGGTTAGAGTTCATGGCAAGCAATTCCCGGA
GTGGATGCCCGTCATGCGTCGGAGAAGCACTCTCTCCTTTGCAGAGCGGA
GTGTGCCCGATGCCGTGTACATAGGAAGAGCTCGCTCACGAGCTGGTTCT
GTGTTGCCTTGTTTTGTTTCGTTTTTGTTTTGTTTTGCCTTGTTTTGCCT
TGTTTTGCCTTGTTTTGCCTTGTTTTGCCTTGTTTTGCCTTGTTTTGTTT
TGGATATGAGGCGAAAAGCTGGCAGCTTTCTCGAGGCCACGCGATGGTTT
TCTTCCGTTTTCAACGCCCATTTTTTTGTCGGGAGTAAGTTGTAGTGTCC
ATTTTGGCAGAGAAATGGTTTTGGAAACACGAGGCTTTGCGTATTGTGCC
TTATACTCTCCTATATTCTACCACTATATGTTCTTTGTGTGTTCCTTGAA
AATTGCCCAGGGAGATTAGATCGGACTGAGCGGAAGTCAGCGCTTGAGGG
TCTCGCTTTGCGCGTGACGAAGCGTTGTACATATATATACATATATTTCG
TAAACAATTTGTTATTTGGCCCCTTACAGGAAAAAAAAGGAAACAAAGGG
AGGAGGCGCGCCTCTTTAGCCCTATAATCCCCGCCCCCATTTCCCACACC
TACTTGTCTTGTGACGAAAACCGTTTTTTTTCGTTGTTTGTAGTTTAGTT
GATGGGCGGGGTAGGAATGGAAATCTTTGCTACACTAGTGTACGATCGGA
TTATTAATAGTAATATATTGTGTTATTGTTTCGAATGGATGAGAACAGCC
GCCATGCCGCACCTCAAGATTGCTCCGATTTGAAACCTGAAAGGCGGTTG
TTTTGCTGGCGGAATCCTGATTGATTTGATTGATTTGATTTGATACTAAG
CGCGAGCGAGAAGCGATGGTTGGTCGTGAACAGGAAGGAGCGCATGAGTT
TTGCTATTCGGTAGACACGAGCGAAGCGGGTTTTGCTTACGGGGCTTGAG
TCGAACCGAATCGAACTGAACCTTCTATCTGAGCCGGACGCGGATTGATC
AATTACGGGTGGAACATCGGTTACACTCTTTCGATTGGATGGTAGTAGCT
GGGGACTGGTTGAGAGACTGAATGAATGAACGGAGGATACACTTCGTAGA
AGTTCGTGAAGATTTTCTCTTGTACCGGTACCAGGGGAAGTAGCCATCCA
TCTATCATCTATCTCCTTGAGCAGTTTTCGGTGAATGATGACGTTAGTTC
GTTGGGTCATTTTCATCACGTACGTACTTGTACCTTCATTTCCCATGCTG
TCGAAGGTGGAGCGCTGCGTAACCAATAGGGACTGGACTGCTGGTAACGT
AAGTAGTGTGTTCCGTACGACAAATAGTTGGTAATTGTTGTTGTCTCTAA
TGCCTTGTTGTTGTCCGGGTTGCGGCTGTCGATTTTTATGGGCTCACGAA
ACCTCCAATTTTAG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig93:631215..642378+ >mRNA_A-nodosum_M_contig93.51.2 ID=mRNA_A-nodosum_M_contig93.51.2|Name=mRNA_A-nodosum_M_contig93.51.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=2553bp|location=Sequence derived from alignment at A-nodosum_M_contig93:631215..642378+ (Ascophyllum nodosum dioecious)
ATGAGAGGACTCGGGCAGCCCTGCCGAGCCTGTGCGGACAACTGCGACGG
CGGGGGACTCGACGTTTGTGTTGCTTGCGACGAGGTTCAGACCCCTGCTC
CGAGCATAACTACTCCCGCGCCGTCCCAGCCTCCCGAAACGCTTGCTCCG
TCAGATATGGTGCCCACACCAGTGCCTTCTGATATCACCCCTACGGTTGT
GCCCACCGCAACGGAGACTCCGGTGGTTACCCCAACCCCAGTGGTTACCA
TCGCTCCGACAGAAACAGCCGCGCCTGTAGCTACCACGACAGCTTCGAGC
ATAACTACTCCCGCGCCGTCCCAGCCTCCCGAAACGCTTGCTCCGGCGGA
GATGGTGCCCACACCAGTGCCTTCTGAGATCGCCCCTACGGGTGTGCCCA
GCGCAACGGACACTCCGGTGGTTACCCCAACCCCAGTGGTTACCGTCGCT
CCGGCAGAAACAGCCGCGCCTGTAGCTACCCCGGCACCTCAGTTCATCTT
ACCACCCCAGTTAAGCCTGCCACCAGGATTCACCCTGCCACCCGGATTCA
CCCTGCCACCCGGATTCACCTTCCCACCAGGATTCACCCTGCCACCCGAT
TTCACCCTGCCACCCGATTTCACCCTGCCACCAGAGATTTCCTTGCCACC
CGCGTTTTTACCAACCGAGTCAACCCTAGCACCTGGAGTTACCACGGCAC
CCGGGGCCACGATGGCGCCTGCAGATACCACGGCGCCTGAGGCCACCATG
GCGCTTACTAACGCCCCAACGACGGAAATAATTCCAACGGCGCCATCGAT
GGGTCCCACACGATTTCCGTCCGTAGCACCGATGGTGTCTCCAACGGCGA
TACCGACGTCAGTCCCCACGAGATCTCCCACAGCGGTACCGACCGCAGTC
CCAACGATCTCTCCCACAGCGGTACCGACCGTAGTCCCAACGGGATCCCC
CACAGCGGTACCGACCGCAGTCCCAACGGGATCCCCCACAGCGGTACCGA
CGGCTGTCCCAACGGATCTCCCACAGCTGTACCGACTGCAGTCCCAACGG
CATCTCCACAGCGGTACCGACCGCAGTCCCAACGGCATCTCCCACAGCGG
CACCGACTGCAGTCCCAACGGCATCTCCGACAGCGGCACCGACTGCAGTT
CCAACGGGTCTCCGACAGCGGTACCGACTTCATCAACTATGACCGCCAGC
GTTCAGCTGAATGGCGTCACCGGAAGGGATGAGGAGACTCTCAAGGTAAA
CCTGATGGAAGGTTTCACGGCCGCATTGTCTTTGAACAGCGCCATGAATG
TGACCATAGCCATCGAGCAGTTCTCGCCGGAAACTAGCGCCTCCGTGCGC
ATCCGCGGCAGACGCAGCCTTCAACAGGAGACATGCAGCATGAGCACTGA
AACGTGCACCGTGACCGCCACCGCGACTGTGGCCTTCGAAGCGGGCGACA
GCTCTGCTCGGGGTGTTGAAAGCCTGTCGGTAAAGGAAAACTTCGAGATG
ATCGCCGAGAGCGCGGATGTAGACGCTTCAGATGTTACGCTGAGCGAGCT
CAAGGTCAGCGCAGACCCGAACGAACCGGTTTCGAACGATGACAGCGTAG
ACTTGGTGGGGCAGACGACGTCGTCTTCGAGCAGCCCATCGTCCGAAAAC
TATTGGCTGTTCATCTTGGCCCTCGCGCTGCTCCTGATGCTCTGGCTGTG
TTGCTTGTGTTGGGCTTACCTACGCTATAGCAATGCTAAGGAGGAAATTT
CTGCGGACCAGGCAAGGCGCTCCGCGTCAAGCACGGGTCGTTGGGGCGGA
GATAGCTACGGAGACCCACCTTCTCCTTCCAAGGGCGTCGACAGCATCGA
AAGGGCCAAGATGGATACGCTGATAATGGACCAGAAGCGCAAGGaAAAAA
CCAAGTCCATGGGAGGAAACGATAGCCAGGTCGGGCTCAGGACGAGCCTG
GAAGACATCCCGGAGGAGTCTGGCTCCAGCGCCGGGGACCCCAACTTTAA
GGACAACCGCAGCAGCCGCGTCAATATGATTTCGCGAAACAGCGTCGGGA
GGAGTTCTTGGGAAGAAGAGGAGGATGACGATGACGATGACGACGACTGG
GAAGCGAGCAGGAGATCGTTCCGCGAGGGTGGGGCGGTTCCCTCCGGACG
TCAGGTGTTGTCTAGGGGCAAGCAACGGTCCACGGGCAGCAGCTCTTTCA
GCGACGAGCTCGCGGCGCAGCGTGGGCCGGAAGCTCGTAGGGCTAGTGGT
GGTTCCAGGCGGAACACCTTCAGCAGTGCGGGCGAGAGTTCCACGAGCAA
CGAAGTAGACCAACGAACGTCCAACACCTCTAACACGTCCGGTGGAGTGT
CGGGATCGGGATCGGGATCGGGCGGTATCTCTAGCTCCTTCACGTCTTCG
GCGGGAGTGACATCGAGCACAGTGGAGGACGATCGCGAGAACAATGACGA
CCAGGGGTCTAGCGATTACGACAGTGTTTCGAAAGATGACGCCACATCAT
CGGTCCCTGAACACGGAGCAGGCGCCCCCGAGAGGGCGCCCGAGACGTCG
TAG back to top
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