mRNA_A-nodosum_M_contig921.6.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A6H5L7C8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C8_9PHAE) HSP 1 Score: 347 bits (890), Expect = 4.400e-109 Identity = 184/352 (52.27%), Postives = 229/352 (65.06%), Query Frame = 3
Query: 3 ELVDVCNPSHRKALKEISHFSWYALAIYTWYLYLFARPCSGGCELLSYSCTAAHAPFTGLRAARSGAPTALSTKITSTPAPTRILRRGGATDHGVARRWHG-RRRQRLPSDHLPASVLRWPPRIGRGAGLGSGGGVSIRGDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALL------GLQTAT----------NRR--PRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
+++DV R AL+EISHFS YALAIYTWYLY+F RPC G C+LL YSCT F R+++ TST G G+ + G R R + GGVS+RGDNWLG HEA LL+VAG HRGCE VDAHF+SG+ TPYCVLVDH WRCVV+SIRGTMSL+DC+ DL AEPA +EE G++WGFDGRG++ HQGVL RAEW+R+DLE QGH+RALL G + A +RR PR + YSL VTGHSLGGSTG LL+Y+L+ +YPSVRC+A++P+GGLL+ HAE+C +FV+ + +G+DVVP LS
Sbjct: 291 QVLDVTIGEDRSALEEISHFSRYALAIYTWYLYVFERPCCGACDLLCYSCTGRSRAFHRTRSSKKD----WGNTNTSTNTSAAGGSNGATAAPGIDSKGRGGRSTMRNKPEKDSGXXXXXXXXXXXXXXXXXRGGVSVRGDNWLGTHEAALLKVAGLHRGCEVVDAHFASGVVETPYCVLVDHAWRCVVVSIRGTMSLDDCLCDLQAEPACMEESGKRWGFDGRGMYAHQGVLARAEWVRKDLEDQGHIRALLLGGGPAGEEGAPQKVASAAPGGDRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCLAVSPLGGLLNSPHAENCGEFVLSSALGEDVVPRLS 638
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: D7FZ60_ECTSI (BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ60_ECTSI) HSP 1 Score: 314 bits (805), Expect = 3.890e-97 Identity = 167/322 (51.86%), Postives = 205/322 (63.66%), Query Frame = 3
Query: 93 YLYLFARPCSGGCELLSYSCTAAHAPFTGLRAARSG-APTALSTKITSTPAPTRILRRGGATDHGVARRWHGRRRQRLPSDHLPASVLRWPPRIGRGAGLGSGGGVSIRGDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALL------GLQTATNR------------RPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
YLY+F RPC G C+LL YSCT F R+++ T G G R R + S +V P +G G GVS+RGDNWLG HEA LLRVAG HRGCE VDAHF+SG+ TPYCVLVDH WRCVV+SIRGTMSL+DC+ DL AEPA +EE G++WGFDGRG++ H+GVL RAEW+R+DLE QGH+RALL G + A R PR + YSL VTGHSLGGSTG LL+Y+L+ +YPSVRCVAI+P+GGLL+ HAE+C +FV+ + +G+DVVP LS
Sbjct: 4 YLYVFERPCCGACDLLCYSCTGRSRAFHRTRSSKKDWGNTXXXXXXXXXXXXXXXXXXXGIDSKGRGGRSTMRNKTEKDSGGGGGNVXXXPGGVG-------GPGVSVRGDNWLGTHEAALLRVAGLHRGCEVVDAHFASGVVETPYCVLVDHAWRCVVVSIRGTMSLDDCLCDLQAEPACMEESGKRWGFDGRGMYAHEGVLARAEWVRKDLEDQGHIRALLLGGGPAGEEGAPQRVASVAPGGGRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCVAISPLGGLLNSPHAENCGEFVLSSALGEDVVPRLS 318
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: B8BW96_THAPS (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW96_THAPS) HSP 1 Score: 171 bits (433), Expect = 9.260e-46 Identity = 84/195 (43.08%), Postives = 122/195 (62.56%), Query Frame = 3
Query: 417 GDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
GDN+L IHE ++ AG R + A F +G + TPYC+++D +W+ VV+SIRG+++LEDCV D+ +P+ ++ G K+GF G G + H GVLE +W+ DL L LL A R Y+L + GHSLGG GV+LS +L++ YP++RC+A +P GGLL A SC +FV ++ D+VP LS
Sbjct: 134 GDNFLRIHERTMMAHAGLDRS-DIAYASFETGFYETPYCIVIDRKWKSVVLSIRGSLTLEDCVVDVLLDPSPLDALGDKYGFAGEGQYCHGGVLECTQWLHSDLMRNNILETLLMGDNAQCR-----GYALRIVGHSLGGGIGVILSLMLRQTYPNLRCIAYSPPGGLLTHDLATSCSEFVNTFILDSDIVPRLS 322
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A7S1ZJB5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJB5_TRICV) HSP 1 Score: 163 bits (413), Expect = 2.110e-43 Identity = 88/201 (43.78%), Postives = 115/201 (57.21%), Query Frame = 3
Query: 411 IRGDNWLGIHEAGLLRVAGFHRGCEAVD---AHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHL-RALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
I GDN H LL H G ++ D AHF SG TPYCV++D WR VV+SIRGT+SLEDCV D+ +P ++ GR+ GFDG G H GVL+R+ W+ DL+ G L R LLG YSL + GHSLG + +LS+++++ YPSVRC+ +P GG L A C F V+ D+VP LS
Sbjct: 18 IDGDNCCRAHRTALL----LHAGLDSSDLRYAHFRSGFRETPYCVVIDRRWRTVVLSIRGTLSLEDCVVDVLLDPEPLDGLGRECGFDGDGQHCHGGVLDRSRWVHSDLKRHGILERLLLGPDA------ECPGYSLRIVGHSLGAAVASILSHMMRRTYPSVRCLCYSPPGGFLSWRLATECRHFTTSFVLDSDLVPRLS 208
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A7S4R4T3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4T3_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.930e-43 Identity = 111/325 (34.15%), Postives = 155/325 (47.69%), Query Frame = 3
Query: 36 KALKEISHFSWYALAIYTWYLYLFARPCSGGCELLSYSCTAAHAPFTGLRAARSGAPTALSTKITSTPAPTRILRRGGA-TDHGVARRWHGRRRQRLPSDHLPASVLRWPPRIGRGAGLGSGGGVSIRGDNWLGIHEAGLLRVAGFHR--GCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
+ L+E + +S +ALAIYTW LY++ P +G C L FT R R G R++ A T G A +G P+ P + GDN G H AGLL + + SG TPYC+++DH+W VV+SIRGT+SLEDC+ D+ +P S+EE GR++GFDG G F H GVL+ W+ DL+ G L LL A +Y L + GHSLG VLLS ++++ YP++RC++ +P G + A C DFV V+ D +P LS
Sbjct: 485 QTLEEGARYSRFALAIYTWVLYVYMNPMTGLCSL----------GFTRCR--RFG---------------RRLMSSSSADTTDGTATATNG------PTPSSP-----------------------VIGDNCFGAHHAGLLSLLDVSTVSPSDVRYVQLESGFSETPYCIVIDHKWSSVVVSIRGTLSLEDCIVDVLVDPESLEELGREFGFDGEGQFCHAGVLDCTRWIYDDLQRHGILEQLLLGDNA-----EFPNYKLRIVGHSLGAGCAVLLSCMMRRTYPNLRCLSYSPPGMFITWKLATECRDFVTSFVLDSDFIPRLS 748
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: K0RXX4_THAOC (Lipase_3 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXX4_THAOC) HSP 1 Score: 158 bits (399), Expect = 2.060e-39 Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 3
Query: 411 IRGDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
I GDN +GIHE+ LL G + A F +G + TPYC+++D +W+ +V++IRG+++LEDCV D+ EP+ ++ G ++GFDG G + H GV+E W+ +DL+ L L+G SY+L V GHSLG G +LS +L+ PS+RC+ +P GGL+ A+ C FV V+ D+VP LS
Sbjct: 495 IIGDNCIGIHESTLL-AHGKIAPDDLAYASFGAGFYETPYCIIIDRKWKSIVLAIRGSLTLEDCVVDVLLEPSPLDALGERYGFDGDGQYCHGGVVECTMWLYEDLKNHRILETLMG---------EFPSYTLRVVGHSLGAGIGFILSLMLRSTIPSLRCLCYSPPGGLVTWDLAKECSGFVNSFVLDSDIVPRLS 681
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A1Z5KQ66_FISSO (Sn1-specific diacylglycerol lipase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ66_FISSO) HSP 1 Score: 157 bits (397), Expect = 3.040e-39 Identity = 111/333 (33.33%), Postives = 152/333 (45.65%), Query Frame = 3
Query: 6 LVDVCNPSHRKALKEISHFSWYALAIYTWYLYLFARPCSGGCELLSYSCTAAHAPFTGLRAARSGAPTALSTKITSTPAPTRILRRGGATDHGVARRWHGRRRQRLPSDHLPASVLRWPPRIGRGAGLGSGGGVSIRGDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHL-RALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
L+D + S + L+E + ++ YALAIYTW LY++ RP +G ELL C A G+ R+ S+ L S IG GDN H LL A + V A SG PYC+++DH W+ VV+SIRGT SLEDCV D+ +P S+E+ G ++GFDG G F H GV+ + +DLE L R LLG A YSL + GHSLG +TG LLSY+L+ YP++RC+ +P+G A C ++ + D+VP LS
Sbjct: 329 LLDRNSFSDMQCLEEGARYASYALAIYTWVLYVYERPITGPLELLGRGCIAC---------------------------------------------CRGKYRRADSSEGLSISGESELLEIGE---------AEFYGDNMCHTHRNALLLSANLS-DADLVYAQLRSGFRDNPYCIILDHAWKTVVVSIRGTFSLEDCVTDVLIQPESLEKLGEEFGFDGHGQFCHGGVMNCVRNVYRDLERHHLLERLLLGPNAA------YPDYSLRIVGHSLGAATGTLLSYMLRHKYPNLRCLNYSPVGCAFTWDLATGCSEWCDSFFVDSDIVPRLS 600
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A7S0KXE0_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXE0_9STRA) HSP 1 Score: 150 bits (380), Expect = 6.950e-39 Identity = 74/195 (37.95%), Postives = 113/195 (57.95%), Query Frame = 3
Query: 417 GDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
GDN IH++ +L G + V A S PYC+L+DHEW VV+SIRGT SLEDC+ D+ +P +++ G ++GF+G G H G+L A + +DLE+ G L LL + ++Y L + GHSLGG T +LLS+++++ +P +RCV +P G + A +C +F ++ D+VP LS
Sbjct: 1 GDNCCQIHKSAMLLQTGLTEA-DIVYAQLQSSFTQIPYCILLDHEWNTVVLSIRGTFSLEDCITDVTIDPEPLDDLGNEFGFNGDGEHCHGGILTCARIVHRDLESHGILNRLL-----LGEHAKYRNYKLRIVGHSLGGGTAILLSFMMRQKFPDLRCVTHSPPGCSMSWGLATACQEFTTTFILDSDIVPRLS 189
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A4D9CQJ2_9STRA (Lipase_3 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ2_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.390e-38 Identity = 109/338 (32.25%), Postives = 155/338 (45.86%), Query Frame = 3
Query: 21 NPSHRKALKEISHFSWYALAIYTWYLYLFAR-PCSGGCELLSYSCTAAHAPFTGLRAARSGAPTALSTKITSTPAPTRILRRGGATDHGVARRWHGRRRQRLPSDHLPASVLRWPPRIGRGAGLGSGGGVSIRGDNWLGIHEAGLLRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALL----------GLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
+P R+ L+E +HF YALA+Y+W ++ +A+ PC A ALS + R+LR G R HG LG+ + GDNWL HEAGL GCE A F + ++ PY + VDH+W+CVV++IRGT+SLED + D HAEP ++ G+ WGF G G H G+ A+ + +DL L+ L+ G T + + Y L + GHSLG V LS +L++D+P +RC+A GGLL AE F + V+G D+VP L+
Sbjct: 349 DPGDRQVLEEGTHFEAYALAMYSWMMFTYAKTPCV--------------------------AIPALSAR--------RLLR----MPKGPRSRVHG--------------------------DLGA-----VLGDNWLRGHEAGLWEWLNGREGCELAYATFINTLYERPYGIFVDHKWQCVVVAIRGTLSLEDLLNDAHAEPGPLDAMGKAWGFPGDGEHGHVGMANAADCIAKDLCKHRILQRLIQRDHGDSPPAGPHTPLTKSSK--GYGLRIVGHSLGAGAAVFLSLMLRRDFPDLRCLAYCTPGGLLTPGLAEYTKAFTLTFVLGRDLVPRLT 615
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Match: A0A7R9ZB61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB61_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.440e-38 Identity = 75/183 (40.98%), Postives = 107/183 (58.47%), Query Frame = 3
Query: 453 LRVAGFHRGCEAVDAHFSSGIFATPYCVLVDHEWRCVVISIRGTMSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETQGHLRALLGLQTATNRRPRLQSYSLYVTGHSLGGSTGVLLSYVLQKDYPSVRCVAITPMGGLLDEAHAESCLDFVIFAVMGDDVVP*LS 1001
LR GFH + +GI TPYC+L+D+EW+ V+++IRGT S ED + DL P+ ++ GR+ GFD G F H+G+L R++W+ DL L LL PR Y L +TGHSLG L+S +L++ +P++RC A P GGL+ E AE C DFV+ V D++P +S
Sbjct: 93 LRDIGFHH-TSVLYLQEVNGIAKTPYCILLDNEWKTVIVAIRGTRSFEDIIVDLQLTPSKMDYVGRRCGFDASGQFCHKGILTRSKWIYDDLACHQILNELL-----LGENPRCAGYRLVITGHSLGAGCATLISLMLRQRFPTLRCYAFCPPGGLITERLAEVCEDFVVSVVNDTDIIPRMS 269 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig921.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig921.6.1 >prot_A-nodosum_M_contig921.6.1 ID=prot_A-nodosum_M_contig921.6.1|Name=mRNA_A-nodosum_M_contig921.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=137bp MSLEDCVYDLHAEPASIEEYGRKWGFDGRGVFTHQGVLERAEWMRQDLETback to top mRNA from alignment at A-nodosum_M_contig921:78278..80446- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig921.6.1 ID=mRNA_A-nodosum_M_contig921.6.1|Name=mRNA_A-nodosum_M_contig921.6.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2169bp|location=Sequence derived from alignment at A-nodosum_M_contig921:78278..80446- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig921:78278..80446- >mRNA_A-nodosum_M_contig921.6.1 ID=mRNA_A-nodosum_M_contig921.6.1|Name=mRNA_A-nodosum_M_contig921.6.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=411bp|location=Sequence derived from alignment at A-nodosum_M_contig921:78278..80446- (Ascophyllum nodosum dioecious)back to top |