mRNA_A-nodosum_M_contig9196.10.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.440e-50 Identity = 86/124 (69.35%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 4 ALKRLESEENGRKERGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASAETALRKADLKRRKNDEHPEEASV*IAHTAQMKDAAWMRWSICSC 375
ALKR+E+EENGRKERGE CNLCG+S KTFE M YYCNGA+CNGKRIGRGRY Y+A GSNQWHWCS+CYND KDGEIIA AETA+RKADLKR+KNDE E V A +W +C+C
Sbjct: 519 ALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHATGSNQWHWCSSCYNDLKDGEIIALAETAVRKADLKRKKNDEQAEVGDVDNA-----SKLSWSFTGVCTC 637
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 182 bits (461), Expect = 9.550e-50 Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 1
Query: 4 ALKRLESEENGRKERGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASAETALRKADLKRRKNDEHPEEASV 312
ALKRLE+EEN RKERGE CNLCG+S KTFE M YYCNGA+CNGKRIGRGRY Y+A GSNQWHWCS+CYND KDGEIIA AETA+RKADLKR+KNDE EE V
Sbjct: 1431 ALKRLEAEENARKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHATGSNQWHWCSSCYNDLKDGEIIALAETAVRKADLKRKKNDEQAEEPWV 1533
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A835YGT9_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT9_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 6.700e-21 Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 7 LKRLESEENGRKERGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASAETALRKADLKRRKNDEHPEE 303
L R+ + + G+ C LCG+ST T+E NYYCNGA C RI R Y YY G+NQ+HWC+ CY + +DG I + L K DL R+KNDE EE
Sbjct: 274 LVRIREDPEAMRVAGDRCALCGYSTLTWEPPNYYCNGASCGMARIRRNHY-YYTGGANQFHWCTQCYGELRDGAPIRVGDAVLAKRDLVRKKNDELQEE 371
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A7S1Y085_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y085_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 9.310e-20 Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 10 KRLESEENGRKERGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASAE-TALRKADLKRRKNDEHPEEASV 312
+RL ++ + GE C LCG S + FEL NYYCNGA CNG RI R Y++A SNQ HWC CYN KD E I + T + K++LKR K+++ EE V
Sbjct: 133 RRLAQDQESAVKNGEACMLCGESQRNFELPNYYCNGASCNGARIRRSVNYYHSA-SNQHHWCVPCYNQLKDNEPIYMLDGTHINKSELKREKHNKSSEEPWV 233
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A7R9WMR1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMR1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.580e-19 Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 7 LKRLESEENGRKERGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEI-IASAETALRKADLKRRKNDEHPEEASV 312
+++L++E+ R++ + C LCGF FE ++CNG C KRI R + +Y G+NQ+ WC+ CYN+ DG I I + ++KADLK++KNDE EE+ V
Sbjct: 5 MEQLDNEDRERRQSDKACVLCGFEKLLFEPPVFFCNGMNCASKRIRRNSH-FYIGGNNQYFWCNPCYNEL-DGNIPIELVDLTVKKADLKKKKNDEQHEESWV 105
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A7R9YAI7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.040e-18 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 43 ERGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASAE-TALRKADLKRRKNDEHPEEASV 312
+ GE C LC S + FEL NYYCNGA CNG RI R YY + SNQ+HWC CYN KD E I + T + KA+LKR K+++ EE V
Sbjct: 739 QNGEACMLCCKSQRNFELPNYYCNGASCNGARIRRS-VNYYHSKSNQYHWCVPCYNQLKDNEPIYMLDGTHIYKAELKREKHNKSHEEPWV 828
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A1V9Y5R1_9STRA (Histone acetyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5R1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.820e-7 Identity = 47/119 (39.50%), Postives = 60/119 (50.42%), Query Frame = 1
Query: 4 ALK-RLESEENGRKE--RGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASA-------------ETALRKADLKRRKNDEHPEEASV 312
ALK +LE E N R E R E+C LCG + F +C+G C G RI R + YY+ ++HWCSACY KDG + S +T L KA L ++KN E EE V
Sbjct: 897 ALKAQLEDELNKRCELRREEMCQLCGGDSFKFAPCMLFCSGP-CAG-RIRRHTH-YYSDPRGEYHWCSACYKQMKDGPLDMSLLPASTNASGEEPLKTVLLKAHLLKKKNSEVAEEPWV 1012
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A418C260_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C260_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.270e-6 Identity = 47/116 (40.52%), Postives = 62/116 (53.45%), Query Frame = 1
Query: 4 ALK-RLESEENGRKE--RGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGE-------IIASAETA---LRKADLKRRKNDEHPEEASV 312
ALK +LESE R E R E+C LCG + F +C+G C G RI R + YY+ ++HWCS+C+ KDG + A+A TA L KA L ++KN E EE V
Sbjct: 917 ALKEQLESELKSRCEQRREEMCQLCGGDSFKFAPCMLFCSGP-CTG-RIRRHTH-YYSDPRGEFHWCSSCFKQMKDGPLDMTLLPVSATASTADAPLTKALLLKKKNSEVAEEPWV 1029
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: A0A485LE37_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE37_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.300e-6 Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 4 ALK-RLESEENGRKE--RGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEI----------IASAETALRKADLKRRKNDEHPEEASV 312
ALK +LESE R E R E+C LCG + F +C+G C G RI R + YY+ ++HWCS+C+ KDG + AS + L KA L ++KN E EE V
Sbjct: 962 ALKVQLESELKNRCEQRREEMCQLCGGDSFKFAPCMLFCSGP-CAG-RIRRHTH-YYSDPRGEYHWCSSCFKQMKDGPLDMSLLPVSANAASGDPPLTKALLLKKKNSEVAEEPWV 1074
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Match: W4H137_9STRA (Histone acetyltransferase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H137_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.300e-6 Identity = 47/116 (40.52%), Postives = 62/116 (53.45%), Query Frame = 1
Query: 4 ALK-RLESEENGRKE--RGEICNLCGFSTKTFELMNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGE-------IIASAETA---LRKADLKRRKNDEHPEEASV 312
ALK +LESE R E R E+C LCG + F +C+G C G RI R + YY+ ++HWCS+C+ KDG + A+A TA L KA L ++KN E EE V
Sbjct: 979 ALKEQLESELKSRCEQRREEMCQLCGGDSFKFAPCMLFCSGP-CTG-RIRRHTH-YYSDPRGEFHWCSSCFKQMKDGPLDMTLLPVSATASTADAPLTKALLLKKKNSEVAEEPWV 1091 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9196.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9196.10.1 >prot_A-nodosum_M_contig9196.10.1 ID=prot_A-nodosum_M_contig9196.10.1|Name=mRNA_A-nodosum_M_contig9196.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=73bp MNYYCNGARCNGKRIGRGRYIYYAAGSNQWHWCSACYNDFKDGEIIASAEback to top mRNA from alignment at A-nodosum_M_contig9196:16354..17875+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9196.10.1 ID=mRNA_A-nodosum_M_contig9196.10.1|Name=mRNA_A-nodosum_M_contig9196.10.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1522bp|location=Sequence derived from alignment at A-nodosum_M_contig9196:16354..17875+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9196:16354..17875+ >mRNA_A-nodosum_M_contig9196.10.1 ID=mRNA_A-nodosum_M_contig9196.10.1|Name=mRNA_A-nodosum_M_contig9196.10.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=219bp|location=Sequence derived from alignment at A-nodosum_M_contig9196:16354..17875+ (Ascophyllum nodosum dioecious)back to top |